RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W SHS1Q07657 551 aa14.91□□□□□ -0.02
RPN10YHR200W SLX4Q12098 748 aa14.91□□□□□ -0.02
RPN10YHR200W DUR3P33413 735 aa14.9□□□□□ -0.02
RPN10YHR200W TRM2P33753 639 aa14.9□□□□□ -0.02
RPN10YHR200W EFM4P40516 257 aa14.9□□□□□ -0.02
RPN10YHR200W MMM1P41800 426 aa14.9□□□□□ -0.02
RPN10YHR200W VPS62P53285 467 aa14.9□□□□□ -0.02
RPN10YHR200W UBP3Q01477 912 aaKnown RBP RIP-Chip data14.9□□□□□ -0.02not detected
RPN10YHR200W SGT2Q12118 346 aaKnown RBP14.9□□□□□ -0.02
RPN10YHR200W GIS3Q12418 502 aa14.9□□□□□ -0.02
RPN10YHR200W CDC33P07260 213 aaKnown RBP14.89□□□□□ -0.03
RPN10YHR200W CKI1P20485 582 aa14.89□□□□□ -0.03
RPN10YHR200W CCC2P38995 1004 aa14.89□□□□□ -0.03
RPN10YHR200W SEC9P40357 651 aa14.89□□□□□ -0.03
RPN10YHR200W ISM1P48526 1002 aa14.89□□□□□ -0.03
RPN10YHR200W YGR021WP53212 290 aa14.89□□□□□ -0.03
RPN10YHR200W STE20Q03497 939 aaKnown RBP14.89□□□□□ -0.03
RPN10YHR200W SML1Q04964 104 aa14.89□□□□□ -0.03
RPN10YHR200W VAC14Q06708 880 aa14.89□□□□□ -0.03
RPN10YHR200W MAM3Q12296 706 aa14.89□□□□□ -0.03
RPN10YHR200W RAD57P25301 460 aa14.88□□□□□ -0.03
RPN10YHR200W HXT1P32465 570 aa14.88□□□□□ -0.03
RPN10YHR200W YEL043WP32618 956 aa14.88□□□□□ -0.03
RPN10YHR200W KIC1P38692 1080 aa14.88□□□□□ -0.03
RPN10YHR200W PSY2P40164 858 aa14.88□□□□□ -0.03
RPN10YHR200W DAS1P47005 663 aa14.88□□□□□ -0.03
RPN10YHR200W SYH1Q02875 849 aaKnown RBP14.88□□□□□ -0.03
RPN10YHR200W CEF1Q03654 590 aaPredicted RBP14.88□□□□□ -0.03
RPN10YHR200W MAC1P35192 417 aa14.87□□□□□ -0.03
RPN10YHR200W YMR124WP39523 943 aaKnown RBP14.87□□□□□ -0.03
RPN10YHR200W CPR7P47103 393 aa14.87□□□□□ -0.03
RPN10YHR200W TAD1P53065 400 aa14.87□□□□□ -0.03
RPN10YHR200W VPS72Q03388 795 aa14.87□□□□□ -0.03
RPN10YHR200W TRP2P00899 507 aaKnown RBP14.86□□□□□ -0.03
RPN10YHR200W COX11P19516 300 aaKnown RBP14.86□□□□□ -0.03
RPN10YHR200W CBF2P32504 956 aa14.86□□□□□ -0.03
RPN10YHR200W LDH1P38139 375 aa14.86□□□□□ -0.03
RPN10YHR200W TCD1P38756 429 aa14.86□□□□□ -0.03
RPN10YHR200W CEP3P40969 608 aa14.86□□□□□ -0.03
RPN10YHR200W HEM1P09950 548 aaPredicted RBP14.85□□□□□ -0.03
RPN10YHR200W KAP123P40069 1113 aaKnown RBP14.85□□□□□ -0.03
RPN10YHR200W LAM5P43560 674 aa14.85□□□□□ -0.03
RPN10YHR200W CLA4P48562 842 aa14.85□□□□□ -0.03
RPN10YHR200W AZR1P50080 613 aa14.85□□□□□ -0.03
RPN10YHR200W JJJ1P53863 590 aa14.85□□□□□ -0.03
RPN10YHR200W CWC21Q03375 135 aaKnown RBP14.85□□□□□ -0.03
RPN10YHR200W YMR018WQ04364 514 aa14.85□□□□□ -0.03
RPN10YHR200W SOV1Q04748 898 aa14.85□□□□□ -0.03
RPN10YHR200W ASP3-2P0CX77 362 aa14.84□□□□□ -0.03
RPN10YHR200W ASP3-3P0CX78 362 aa14.84□□□□□ -0.03
RPN10YHR200W ASP3-4P0CX79 362 aa14.84□□□□□ -0.03
RPN10YHR200W ASP3-1P0CZ17 362 aa14.84□□□□□ -0.03
RPN10YHR200W ADE2P21264 571 aaKnown RBP14.84□□□□□ -0.03
RPN10YHR200W DPB3P27344 201 aa14.84□□□□□ -0.03
RPN10YHR200W YAP1801P38856 637 aa14.84□□□□□ -0.03
RPN10YHR200W AFG3P39925 761 aa14.84□□□□□ -0.03
RPN10YHR200W BUD16P39988 312 aa14.84□□□□□ -0.03
RPN10YHR200W YNL134CP53912 376 aaKnown RBP14.84□□□□□ -0.03
RPN10YHR200W RPS3P05750 240 aaKnown RBP14.83□□□□□ -0.04
RPN10YHR200W GLN3P18494 730 aa14.83□□□□□ -0.04
RPN10YHR200W CSG2P35206 410 aa14.83□□□□□ -0.04
RPN10YHR200W BLI1P35727 113 aa14.83□□□□□ -0.04
RPN10YHR200W SPC72P39723 622 aa14.83□□□□□ -0.04
RPN10YHR200W SBE2P42223 864 aaKnown RBP14.83□□□□□ -0.04
RPN10YHR200W ALT2P52892 507 aa14.83□□□□□ -0.04
RPN10YHR200W MAL13P53338 473 aa14.83□□□□□ -0.04
RPN10YHR200W DOT1Q04089 582 aaKnown RBP14.83□□□□□ -0.04
RPN10YHR200W MCM16Q12262 181 aa14.83□□□□□ -0.04
RPN10YHR200W ZPS1Q12512 249 aa14.83□□□□□ -0.04
RPN10YHR200W STE11P23561 717 aa14.82□□□□□ -0.04
RPN10YHR200W FUB1P25659 250 aa14.82□□□□□ -0.04
RPN10YHR200W UIP5P36137 443 aa14.82□□□□□ -0.04
RPN10YHR200W TRZ1P36159 838 aaPredicted RBP14.82□□□□□ -0.04
RPN10YHR200W YTA12P40341 825 aa14.82□□□□□ -0.04
RPN10YHR200W DRN1P53255 507 aaKnown RBP14.82□□□□□ -0.04
RPN10YHR200W YGR130CP53278 816 aa14.82□□□□□ -0.04
RPN10YHR200W ERV41Q04651 352 aa14.82□□□□□ -0.04
RPN10YHR200W ABP140Q08641 628 aaKnown RBP14.82□□□□□ -0.04
RPN10YHR200W SFI1Q12369 946 aa14.82□□□□□ -0.04
RPN10YHR200W PCD1Q12524 340 aa14.82□□□□□ -0.04
RPN10YHR200W CDC42P19073 191 aa14.81□□□□□ -0.04
RPN10YHR200W RPT1P33299 467 aaKnown RBP14.81□□□□□ -0.04
RPN10YHR200W YKL050CP35736 922 aa14.81□□□□□ -0.04
RPN10YHR200W VPS70P47161 811 aa14.81□□□□□ -0.04
RPN10YHR200W BOP3P53958 396 aa14.81□□□□□ -0.04
RPN10YHR200W PPM1Q04081 328 aa14.81□□□□□ -0.04
RPN10YHR200W NOP14Q99207 810 aaKnown RBP14.81□□□□□ -0.04
RPN10YHR200W AI5_BETAQ9ZZX0 354 aa14.81□□□□□ -0.04
RPN10YHR200W DAL2P25335 343 aa14.8□□□□□ -0.04
RPN10YHR200W BYE1P36106 594 aa14.8□□□□□ -0.04
RPN10YHR200W REI1P38344 393 aaPredicted RBP14.8□□□□□ -0.04
RPN10YHR200W YHR054CP38780 354 aa14.8□□□□□ -0.04
RPN10YHR200W SET5P38890 526 aaKnown RBP14.8□□□□□ -0.04
RPN10YHR200W KAP114P53067 1004 aa14.8□□□□□ -0.04
RPN10YHR200W BTN2P53286 410 aa14.8□□□□□ -0.04
RPN10YHR200W ALG11P53954 548 aaKnown RBP14.8□□□□□ -0.04
RPN10YHR200W NGL3Q03210 505 aa14.8□□□□□ -0.04
RPN10YHR200W PUS1Q12211 544 aaKnown RBP14.8□□□□□ -0.04
RPN10YHR200W OSH2Q12451 1283 aa14.8□□□□□ -0.04
RPN10YHR200W NOP58Q12499 511 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms