RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W VMS1Q04311 632 aaKnown RBP5.47□□□□□ -1.53
MSH1YHR120W TCO89Q08921 799 aa5.47□□□□□ -1.53
MSH1YHR120W POL3P15436 1097 aa5.47□□□□□ -1.53
MSH1YHR120W PCH2P38126 564 aa5.47□□□□□ -1.53
MSH1YHR120W APT1P49435 187 aaKnown RBP5.47□□□□□ -1.53
MSH1YHR120W PRP31P49704 494 aaPredicted RBP5.47□□□□□ -1.53
MSH1YHR120W SHE10P53075 577 aa5.47□□□□□ -1.53
MSH1YHR120W YNL034WP53963 612 aa5.47□□□□□ -1.53
MSH1YHR120W YNL018CP53976 612 aa5.47□□□□□ -1.53
MSH1YHR120W SML1Q04964 104 aa5.47□□□□□ -1.53
MSH1YHR120W HCR1Q05775 265 aaKnown RBP5.47□□□□□ -1.53
MSH1YHR120W PET123P17558 318 aa5.46□□□□□ -1.53
MSH1YHR120W RSA4P25382 515 aaKnown RBP5.46□□□□□ -1.53
MSH1YHR120W TRK2P28584 889 aa5.46□□□□□ -1.53
MSH1YHR120W MRPL7P36519 292 aa5.46□□□□□ -1.53
MSH1YHR120W STB5P38699 743 aa5.46□□□□□ -1.53
MSH1YHR120W YER186CP40101 306 aa5.46□□□□□ -1.53
MSH1YHR120W YFL052WP43551 465 aa5.46□□□□□ -1.53
MSH1YHR120W ISM1P48526 1002 aa5.46□□□□□ -1.53
MSH1YHR120W ASN1P49089 572 aaKnown RBP5.46□□□□□ -1.53
MSH1YHR120W HMI1Q12039 706 aa5.46□□□□□ -1.53
MSH1YHR120W YLR422WQ06409 1932 aa5.46□□□□□ -1.54
MSH1YHR120W RFS1P38234 210 aaKnown RBP5.46□□□□□ -1.54
MSH1YHR120W MMS4P38257 691 aa5.46□□□□□ -1.54
MSH1YHR120W YHR131CP38835 850 aa5.46□□□□□ -1.54
MSH1YHR120W RAD26P40352 1085 aa5.46□□□□□ -1.54
MSH1YHR120W SPP1Q03012 353 aa5.46□□□□□ -1.54
MSH1YHR120W SHS1Q07657 551 aa5.46□□□□□ -1.54
MSH1YHR120W YPL216WQ08964 1102 aa5.46□□□□□ -1.54
MSH1YHR120W NEW1Q08972 1196 aaKnown RBP5.46□□□□□ -1.54
MSH1YHR120W RPL4AP10664 362 aaKnown RBP5.45□□□□□ -1.54
MSH1YHR120W BIO2P32451 375 aa5.45□□□□□ -1.54
MSH1YHR120W RIM101P33400 625 aa5.45□□□□□ -1.54
MSH1YHR120W YHR202WP38887 602 aa5.45□□□□□ -1.54
MSH1YHR120W FAF1P40546 346 aaPredicted RBP5.45□□□□□ -1.54
MSH1YHR120W CCM1P48237 864 aaPredicted RBP5.45□□□□□ -1.54
MSH1YHR120W RPL4BP49626 362 aaKnown RBP5.45□□□□□ -1.54
MSH1YHR120W VID30P53076 958 aa5.45□□□□□ -1.54
MSH1YHR120W TLG2Q08144 397 aa5.45□□□□□ -1.54
MSH1YHR120W YKL068W-AQ3E826 78 aa5.45□□□□□ -1.54
MSH1YHR120W YOL087CQ99247 1116 aa5.45□□□□□ -1.54
MSH1YHR120W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
MSH1YHR120W MST1P07236 462 aa5.45□□□□□ -1.54
MSH1YHR120W RPO26P20435 155 aa5.45□□□□□ -1.54
MSH1YHR120W MRF1P30775 413 aaPredicted RBP5.45□□□□□ -1.54
MSH1YHR120W SAC6P32599 642 aaKnown RBP5.45□□□□□ -1.54
MSH1YHR120W MUD2P36084 527 aaKnown RBP5.45□□□□□ -1.54
MSH1YHR120W HEL1P36113 551 aa5.45□□□□□ -1.54
MSH1YHR120W SAP190P36123 1033 aa5.45□□□□□ -1.54
MSH1YHR120W MCX1P38323 520 aaPredicted RBP5.45□□□□□ -1.54
MSH1YHR120W CAJ1P39101 391 aa5.45□□□□□ -1.54
MSH1YHR120W SCD6P45978 349 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
MSH1YHR120W ALG11P53954 548 aaKnown RBP5.45□□□□□ -1.54
MSH1YHR120W BOP3P53958 396 aa5.45□□□□□ -1.54
MSH1YHR120W UTP13Q05946 817 aaKnown RBP5.45□□□□□ -1.54
MSH1YHR120W YKL091CP33324 310 aaKnown RBP5.45□□□□□ -1.54
MSH1YHR120W CTM1P38818 585 aa5.45□□□□□ -1.54
MSH1YHR120W CCT4P39078 528 aaKnown RBP5.45□□□□□ -1.54
MSH1YHR120W LCB2P40970 561 aa5.45□□□□□ -1.54
MSH1YHR120W ULI1P43604 169 aa5.45□□□□□ -1.54
MSH1YHR120W RNT1Q02555 471 aa5.45□□□□□ -1.54
MSH1YHR120W UTP14Q04500 899 aaKnown RBP5.45□□□□□ -1.54
MSH1YHR120W DNL4Q08387 944 aaPredicted RBP5.45□□□□□ -1.54
MSH1YHR120W MED1Q12321 566 aa5.45□□□□□ -1.54
MSH1YHR120W OSH2Q12451 1283 aa5.45□□□□□ -1.54
MSH1YHR120W VMA1P17255 1071 aaKnown RBP5.44□□□□□ -1.54
MSH1YHR120W PRR1P28708 518 aa5.44□□□□□ -1.54
MSH1YHR120W MUD1P32605 298 aaKnown RBP5.44□□□□□ -1.54
MSH1YHR120W CCL1P37366 393 aa5.44□□□□□ -1.54
MSH1YHR120W XDJ1P39102 459 aa5.44□□□□□ -1.54
MSH1YHR120W NPP2P39997 493 aa5.44□□□□□ -1.54
MSH1YHR120W NDC80P40460 691 aa5.44□□□□□ -1.54
MSH1YHR120W TOS3P43637 560 aa5.44□□□□□ -1.54
MSH1YHR120W LSC2P53312 427 aa5.44□□□□□ -1.54
MSH1YHR120W ERG5P54781 538 aa5.44□□□□□ -1.54
MSH1YHR120W PUS1Q12211 544 aaKnown RBP5.44□□□□□ -1.54
MSH1YHR120W PKH2Q12236 1081 aaKnown RBP5.44□□□□□ -1.54
MSH1YHR120W SYN8P31377 255 aa5.44□□□□□ -1.54
MSH1YHR120W DEP1P31385 405 aa5.44□□□□□ -1.54
MSH1YHR120W SEC21P32074 935 aaKnown RBP5.44□□□□□ -1.54
MSH1YHR120W TRM2P33753 639 aa5.44□□□□□ -1.54
MSH1YHR120W EFM4P40516 257 aa5.44□□□□□ -1.54
MSH1YHR120W OSW7P43611 510 aa5.44□□□□□ -1.54
MSH1YHR120W EEB1Q02891 456 aa5.44□□□□□ -1.54
MSH1YHR120W SPO71Q03868 1245 aa5.44□□□□□ -1.54
MSH1YHR120W YOL075CQ08234 1294 aa5.44□□□□□ -1.54
MSH1YHR120W AFT2Q08957 416 aa5.44□□□□□ -1.54
MSH1YHR120W GCS1P35197 352 aa5.43□□□□□ -1.54
MSH1YHR120W YET1P35723 206 aa5.43□□□□□ -1.54
MSH1YHR120W VPS41P38959 992 aa5.43□□□□□ -1.54
MSH1YHR120W UBP5P39944 805 aa5.43□□□□□ -1.54
MSH1YHR120W AIP1P46680 615 aaKnown RBP5.43□□□□□ -1.54
MSH1YHR120W HSH155P49955 971 aaKnown RBP5.43□□□□□ -1.54
MSH1YHR120W CWC21Q03375 135 aaKnown RBP5.43□□□□□ -1.54
MSH1YHR120W DON1Q05610 365 aa5.43□□□□□ -1.54
MSH1YHR120W ESC8Q08119 714 aa5.43□□□□□ -1.54
MSH1YHR120W NFU1P32860 256 aa5.43□□□□□ -1.54
MSH1YHR120W RAD54P32863 898 aa5.43□□□□□ -1.54
MSH1YHR120W STO1P34160 861 aaKnown RBP5.43□□□□□ -1.54
MSH1YHR120W SHM1P37292 490 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms