RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C PEX18P38855 283 aa4.01□□□□□ -1.77
PDX1YGR193C VPS41P38959 992 aa4.01□□□□□ -1.77
PDX1YGR193C SAP185P40856 1058 aa4.01□□□□□ -1.77
PDX1YGR193C DAS1P47005 663 aa4.01□□□□□ -1.77
PDX1YGR193C RAD17P48581 401 aa4.01□□□□□ -1.77
PDX1YGR193C HOP2P53187 214 aa4.01□□□□□ -1.77
PDX1YGR193C SUN4P53616 420 aa4.01□□□□□ -1.77
PDX1YGR193C JJJ1P53863 590 aa4.01□□□□□ -1.77
PDX1YGR193C ERO1Q03103 563 aa4.01□□□□□ -1.77
PDX1YGR193C SNZ1Q03148 297 aa4.01□□□□□ -1.77
PDX1YGR193C YMR111CQ04461 462 aaPredicted RBP4.01□□□□□ -1.77
PDX1YGR193C SMD2Q06217 110 aaKnown RBP4.01□□□□□ -1.77
PDX1YGR193C SPP382Q06411 708 aaPredicted RBP4.01□□□□□ -1.77
PDX1YGR193C SWA2Q06677 668 aa4.01□□□□□ -1.77
PDX1YGR193C HXK1P04806 485 aaKnown RBP4□□□□□ -1.77
PDX1YGR193C STE11P23561 717 aa4□□□□□ -1.77
PDX1YGR193C MCM3P24279 971 aaKnown RBP4□□□□□ -1.77
PDX1YGR193C POL4P25615 582 aa4□□□□□ -1.77
PDX1YGR193C MRE11P32829 692 aa4□□□□□ -1.77
PDX1YGR193C COY1P34237 679 aa4□□□□□ -1.77
PDX1YGR193C YPT53P36019 220 aa4□□□□□ -1.77
PDX1YGR193C BYE1P36106 594 aa4□□□□□ -1.77
PDX1YGR193C CRP1P38845 465 aaKnown RBP4□□□□□ -1.77
PDX1YGR193C YER034WP40022 185 aaKnown RBP4□□□□□ -1.77
PDX1YGR193C LAM5P43560 674 aa4□□□□□ -1.77
PDX1YGR193C VTC2P43585 828 aa4□□□□□ -1.77
PDX1YGR193C YJR107WP47145 328 aa4□□□□□ -1.77
PDX1YGR193C MSE1P48525 536 aa4□□□□□ -1.77
PDX1YGR193C ZDS2P54786 942 aa4□□□□□ -1.77
PDX1YGR193C LAP3Q01532 483 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
PDX1YGR193C RAT1Q02792 1006 aaKnown RBP4□□□□□ -1.77
PDX1YGR193C PNG1Q02890 363 aa4□□□□□ -1.77
PDX1YGR193C ARR1Q06596 294 aa4□□□□□ -1.77
PDX1YGR193C ACK1Q07622 623 aaPredicted RBP4□□□□□ -1.77
PDX1YGR193C HMI1Q12039 706 aa4□□□□□ -1.77
PDX1YGR193C WHI5Q12416 295 aa4□□□□□ -1.77
PDX1YGR193C RKM4Q12504 494 aa4□□□□□ -1.77
PDX1YGR193C HMG1P12683 1054 aa3.99□□□□□ -1.77
PDX1YGR193C SUI2P20459 304 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C HCM1P25364 564 aa3.99□□□□□ -1.77
PDX1YGR193C ECM32P32644 1121 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C NOP4P37838 685 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C YBL028CP38202 106 aa3.99□□□□□ -1.77
PDX1YGR193C HSM3P38348 480 aa3.99□□□□□ -1.77
PDX1YGR193C TIF5P38431 405 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C MGE1P38523 228 aa3.99□□□□□ -1.77
PDX1YGR193C YHR020WP38708 688 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C RPN3P40016 523 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C PXA1P41909 870 aa3.99□□□□□ -1.77
PDX1YGR193C MCM6P53091 1017 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C EFM5P53200 248 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C ALD6P54115 500 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C REX2P54964 269 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C ROD1Q02805 837 aa3.99□□□□□ -1.77
PDX1YGR193C ERV41Q04651 352 aa3.99□□□□□ -1.77
PDX1YGR193C GPB1Q08886 897 aa3.99□□□□□ -1.77
PDX1YGR193C CDC53Q12018 815 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C WRS1Q12109 432 aaKnown RBP3.99□□□□□ -1.77
PDX1YGR193C NYV1Q12255 253 aa3.99□□□□□ -1.77
PDX1YGR193C RRP36Q12481 300 aaPredicted RBP3.99□□□□□ -1.77
PDX1YGR193C PIF1P07271 859 aa3.98□□□□□ -1.77
PDX1YGR193C PMS1P14242 873 aa3.98□□□□□ -1.77
PDX1YGR193C PXA2P34230 853 aa3.98□□□□□ -1.77
PDX1YGR193C NUP120P35729 1037 aa3.98□□□□□ -1.77
PDX1YGR193C SPT8P38915 602 aa3.98□□□□□ -1.77
PDX1YGR193C POP2P39008 433 aa3.98□□□□□ -1.77
PDX1YGR193C CCT3P39077 534 aaKnown RBP3.98□□□□□ -1.77
PDX1YGR193C NDE1P40215 560 aa3.98□□□□□ -1.77
PDX1YGR193C SDS3P40505 327 aa3.98□□□□□ -1.77
PDX1YGR193C GCD10P41814 478 aa3.98□□□□□ -1.77
PDX1YGR193C SDA1P53313 767 aaKnown RBP3.98□□□□□ -1.77
PDX1YGR193C PTA1Q01329 785 aaPredicted RBP3.98□□□□□ -1.77
PDX1YGR193C RSM24Q03976 319 aa3.98□□□□□ -1.77
PDX1YGR193C MRD1Q06106 887 aaKnown RBP3.98□□□□□ -1.77
PDX1YGR193C SPN1Q06505 410 aaPredicted RBP3.98□□□□□ -1.77
PDX1YGR193C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
PDX1YGR193C OXR1Q08952 273 aa3.98□□□□□ -1.77
PDX1YGR193C PGC1Q08959 321 aa3.98□□□□□ -1.77
PDX1YGR193C YPL260WQ08977 551 aa3.98□□□□□ -1.77
PDX1YGR193C SSK22P25390 1331 aaPredicted RBP3.97□□□□□ -1.77
PDX1YGR193C PGI1P12709 554 aaKnown RBP3.97□□□□□ -1.77
PDX1YGR193C SWC3P31376 625 aa3.97□□□□□ -1.77
PDX1YGR193C ACP1P32463 125 aa3.97□□□□□ -1.77
PDX1YGR193C HIR1P32479 840 aa3.97□□□□□ -1.77
PDX1YGR193C MIC60P36112 540 aa3.97□□□□□ -1.77
PDX1YGR193C TRZ1P36159 838 aaPredicted RBP3.97□□□□□ -1.77
PDX1YGR193C RIC1P40395 1056 aa3.97□□□□□ -1.77
PDX1YGR193C ESL1P40456 1118 aa3.97□□□□□ -1.77
PDX1YGR193C PHO23P50947 330 aa3.97□□□□□ -1.77
PDX1YGR193C YNL050CP53952 270 aa3.97□□□□□ -1.77
PDX1YGR193C UBX4P54730 416 aa3.97□□□□□ -1.77
PDX1YGR193C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
PDX1YGR193C YAP6Q03935 383 aa3.97□□□□□ -1.77
PDX1YGR193C YDR286CQ05530 114 aa3.97□□□□□ -1.77
PDX1YGR193C PSR2Q07949 397 aa3.97□□□□□ -1.77
PDX1YGR193C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
PDX1YGR193C PIN2Q12057 282 aa3.97□□□□□ -1.77
PDX1YGR193C MCD1Q12158 566 aa3.97□□□□□ -1.77
PDX1YGR193C NTO1Q12311 748 aa3.97□□□□□ -1.77
PDX1YGR193C YIL002W-AQ3E7Z5 69 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms