RNA–Protein interactions for RNA: YFR009W

GCN20, Transcript of Positive regulator of the Gcn2p kinase activity, yeastyeast

Gene GCN20, Length 2,259 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GCN20YFR009W CRD1Q07560 283 aa5.14□□□□□ -1.59
GCN20YFR009W SDH5Q08230 162 aa5.14□□□□□ -1.59
GCN20YFR009W CBP1P07252 654 aa5.13□□□□□ -1.59
GCN20YFR009W PEP5P12868 1029 aa5.13□□□□□ -1.59
GCN20YFR009W DBF4P32325 704 aa5.13□□□□□ -1.59
GCN20YFR009W MUD1P32605 298 aaKnown RBP5.13□□□□□ -1.59
GCN20YFR009W YKR018CP36114 725 aa5.13□□□□□ -1.59
GCN20YFR009W PMC1P38929 1173 aaPredicted RBP5.13□□□□□ -1.59
GCN20YFR009W SMX2P40204 77 aaKnown RBP5.13□□□□□ -1.59
GCN20YFR009W URB2P47108 1174 aa5.13□□□□□ -1.59
GCN20YFR009W VPS70P47161 811 aa5.13□□□□□ -1.59
GCN20YFR009W YGR111WP53265 400 aa5.13□□□□□ -1.59
GCN20YFR009W YGR117CP53270 476 aa5.13□□□□□ -1.59
GCN20YFR009W TMA64Q04600 565 aaKnown RBP5.13□□□□□ -1.59
GCN20YFR009W PIG1Q06216 648 aa5.13□□□□□ -1.59
GCN20YFR009W NCA2Q12374 616 aa5.13□□□□□ -1.59
GCN20YFR009W JIP3O13555 125 aa5.13□□□□□ -1.59
GCN20YFR009W VMA1P17255 1071 aaKnown RBP5.13□□□□□ -1.59
GCN20YFR009W HPR1P17629 752 aaKnown RBP5.13□□□□□ -1.59
GCN20YFR009W COT1P32798 439 aa5.13□□□□□ -1.59
GCN20YFR009W YKR023WP36119 530 aaKnown RBP5.13□□□□□ -1.59
GCN20YFR009W END3P39013 349 aa5.13□□□□□ -1.59
GCN20YFR009W NMD5P46970 1048 aa5.13□□□□□ -1.59
GCN20YFR009W YMR1P47147 688 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
GCN20YFR009W SHR3Q02774 210 aa5.13□□□□□ -1.59
GCN20YFR009W USA1Q03714 838 aa5.13□□□□□ -1.59
GCN20YFR009W CDC53Q12018 815 aaKnown RBP5.13□□□□□ -1.59
GCN20YFR009W RPS3P05750 240 aaKnown RBP5.12□□□□□ -1.59
GCN20YFR009W PMR1P13586 950 aa5.12□□□□□ -1.59
GCN20YFR009W PMS1P14242 873 aa5.12□□□□□ -1.59
GCN20YFR009W POL3P15436 1097 aa5.12□□□□□ -1.59
GCN20YFR009W YBL055CP34220 418 aaPredicted RBP5.12□□□□□ -1.59
GCN20YFR009W NPP2P39997 493 aa5.12□□□□□ -1.59
GCN20YFR009W TAM41P53230 385 aa5.12□□□□□ -1.59
GCN20YFR009W RPA49Q01080 415 aaPredicted RBP5.12□□□□□ -1.59
GCN20YFR009W YDR338CQ05497 695 aa5.12□□□□□ -1.59
GCN20YFR009W PNP1Q05788 311 aa5.12□□□□□ -1.59
GCN20YFR009W ISA1Q07821 250 aaPredicted RBP5.12□□□□□ -1.59
GCN20YFR009W SMC5Q08204 1093 aa5.12□□□□□ -1.59
GCN20YFR009W CAP1P28495 268 aaKnown RBP5.12□□□□□ -1.59
GCN20YFR009W NIP1P32497 812 aaKnown RBP5.12□□□□□ -1.59
GCN20YFR009W GCD6P32501 712 aaKnown RBP5.12□□□□□ -1.59
GCN20YFR009W PIN4P34217 668 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
GCN20YFR009W MCR1P36060 302 aaKnown RBP5.12□□□□□ -1.59
GCN20YFR009W NCL1P38205 684 aaKnown RBP5.12□□□□□ -1.59
GCN20YFR009W HMF1P40037 129 aaKnown RBP5.12□□□□□ -1.59
GCN20YFR009W CLA4P48562 842 aa5.12□□□□□ -1.59
GCN20YFR009W SVF1Q05515 481 aa5.12□□□□□ -1.59
GCN20YFR009W SLX4Q12098 748 aa5.12□□□□□ -1.59
GCN20YFR009W CSR2Q12734 1121 aa5.12□□□□□ -1.59
GCN20YFR009W SAM1P10659 382 aaKnown RBP5.11□□□□□ -1.59
GCN20YFR009W SRV2P17555 526 aaKnown RBP5.11□□□□□ -1.59
GCN20YFR009W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
GCN20YFR009W KIP2P28743 706 aa5.11□□□□□ -1.59
GCN20YFR009W SHE10P53075 577 aa5.11□□□□□ -1.59
GCN20YFR009W FPK1P53739 893 aa5.11□□□□□ -1.59
GCN20YFR009W ADA2Q02336 434 aa5.11□□□□□ -1.59
GCN20YFR009W YDR222WQ04925 415 aa5.11□□□□□ -1.59
GCN20YFR009W FAR8Q05040 523 aa5.11□□□□□ -1.59
GCN20YFR009W NOB1Q08444 459 aaKnown RBP5.11□□□□□ -1.59
GCN20YFR009W SPT2P06843 333 aaPredicted RBP5.11□□□□□ -1.59
GCN20YFR009W ADE3P07245 946 aaKnown RBP5.11□□□□□ -1.59
GCN20YFR009W YML002WP0CF17 737 aa5.11□□□□□ -1.59
GCN20YFR009W SFL1P20134 766 aa5.11□□□□□ -1.59
GCN20YFR009W SPT5P27692 1063 aaKnown RBP5.11□□□□□ -1.59
GCN20YFR009W SWI3P32591 825 aa5.11□□□□□ -1.59
GCN20YFR009W RAD5P32849 1169 aaPredicted RBP5.11□□□□□ -1.59
GCN20YFR009W CSG2P35206 410 aa5.11□□□□□ -1.59
GCN20YFR009W OCT1P35999 772 aa5.11□□□□□ -1.59
GCN20YFR009W CCL1P37366 393 aa5.11□□□□□ -1.59
GCN20YFR009W HEK2P38199 381 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
GCN20YFR009W VHC1P38329 1120 aa5.11□□□□□ -1.59
GCN20YFR009W MSG5P38590 489 aa5.11□□□□□ -1.59
GCN20YFR009W SSP1P38871 571 aa5.11□□□□□ -1.59
GCN20YFR009W FET4P40988 552 aa5.11□□□□□ -1.59
GCN20YFR009W ROD1Q02805 837 aa5.11□□□□□ -1.59
GCN20YFR009W SPC24Q04477 213 aa5.11□□□□□ -1.59
GCN20YFR009W UBX5Q06682 500 aa5.11□□□□□ -1.59
GCN20YFR009W NOC3Q07896 663 aaPredicted RBP5.11□□□□□ -1.59
GCN20YFR009W CMS1Q07897 291 aaKnown RBP5.11□□□□□ -1.59
GCN20YFR009W PDR1P12383 1068 aa5.1□□□□□ -1.59
GCN20YFR009W NAT1P12945 854 aaKnown RBP5.1□□□□□ -1.59
GCN20YFR009W GAL11P19659 1081 aa5.1□□□□□ -1.59
GCN20YFR009W MRPL25P23369 157 aa5.1□□□□□ -1.59
GCN20YFR009W MRPL32P25348 183 aa5.1□□□□□ -1.59
GCN20YFR009W RRN6P32786 894 aa5.1□□□□□ -1.59
GCN20YFR009W VAB2P40003 282 aa5.1□□□□□ -1.59
GCN20YFR009W FTR1P40088 404 aa5.1□□□□□ -1.59
GCN20YFR009W YMR134WP40207 237 aa5.1□□□□□ -1.59
GCN20YFR009W TDA10P42938 290 aa5.1□□□□□ -1.59
GCN20YFR009W PHO86P46956 311 aa5.1□□□□□ -1.59
GCN20YFR009W VPS53P47061 822 aa5.1□□□□□ -1.59
GCN20YFR009W CPR7P47103 393 aa5.1□□□□□ -1.59
GCN20YFR009W YAF9P53930 226 aa5.1□□□□□ -1.59
GCN20YFR009W VPS16Q03308 798 aa5.1□□□□□ -1.59
GCN20YFR009W MSH6Q03834 1242 aa5.1□□□□□ -1.59
GCN20YFR009W IWR1Q07532 353 aaPredicted RBP5.1□□□□□ -1.59
GCN20YFR009W OSW2Q12202 724 aa5.1□□□□□ -1.59
GCN20YFR009W RNA1P11745 407 aaKnown RBP5.09□□□□□ -1.59
GCN20YFR009W KAR3P17119 729 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms