RNA–Protein interactions for RNA: YDR323C

PEP7, Transcript of Adaptor protein involved in vesicle-mediated vacuolar protein sorting, yeast

Gene PEP7, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP7	YDR323C	YDL124W	Q07551	312 aa	Known RBP	4.26	□□□□□ -1.73
PEP7	YDR323C	CLP1	Q08685	445 aa	Predicted RBP	4.26	□□□□□ -1.73
PEP7	YDR323C	YRM1	Q12340	786 aa		4.26	□□□□□ -1.73
PEP7	YDR323C	GPB2	P39717	880 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	PIP2	P52960	996 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	PEX14	P53112	341 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	YML131W	Q03102	365 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	TPP1	Q03796	238 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	TAP42	Q04372	366 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	RNH1	Q04740	348 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	SPN1	Q06505	410 aa	Predicted RBP	4.25	□□□□□ -1.73
PEP7	YDR323C	ATG13	Q06628	738 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	SWA2	Q06677	668 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	PSR2	Q07949	397 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	PGC1	Q08959	321 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	MED1	Q12321	566 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	DFG16	Q99234	619 aa		4.25	□□□□□ -1.73
PEP7	YDR323C	STF1	P01098	86 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	RPL11A	P0C0W9	174 aa	Known RBP	4.24	□□□□□ -1.73
PEP7	YDR323C	ERR1	P0CX10	437 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	ERR2	P0CX11	437 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	RPS4A	P0CX35	261 aa	Known RBP	4.24	□□□□□ -1.73
PEP7	YDR323C	RPS4B	P0CX36	261 aa	Known RBP	4.24	□□□□□ -1.73
PEP7	YDR323C	NOP4	P37838	685 aa	Known RBP	4.24	□□□□□ -1.73
PEP7	YDR323C	PNT1	P38969	423 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	CCC2	P38995	1004 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	RPN3	P40016	523 aa	Known RBP	4.24	□□□□□ -1.73
PEP7	YDR323C	AIM20	P40451	204 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	YJL045W	P47052	634 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	BNA1	P47096	177 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	PMT3	P47190	753 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	ALT1	P52893	592 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	RCM1	P53972	490 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	TGL2	P54857	326 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
PEP7	YDR323C	TAF8	Q03750	510 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	RAD33	Q04231	177 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	YDR306C	Q06640	478 aa		4.24	□□□□□ -1.73
PEP7	YDR323C	PUS7	Q08647	676 aa	Known RBP	4.24	□□□□□ -1.73
PEP7	YDR323C	RPL11B	Q3E757	174 aa	Predicted RBP	4.24	□□□□□ -1.73
PEP7	YDR323C	GLK1	P17709	500 aa	Known RBP	4.23	□□□□□ -1.73
PEP7	YDR323C	HNM1	P19807	563 aa		4.23	□□□□□ -1.73
PEP7	YDR323C	AAR2	P32357	355 aa	Predicted RBP	4.23	□□□□□ -1.73
PEP7	YDR323C	TIF5	P38431	405 aa	Known RBP	4.23	□□□□□ -1.73
PEP7	YDR323C	MEF2	P39677	819 aa		4.23	□□□□□ -1.73
PEP7	YDR323C	VPS8	P39702	1274 aa		4.23	□□□□□ -1.73
PEP7	YDR323C	ZDS2	P54786	942 aa		4.23	□□□□□ -1.73
PEP7	YDR323C	MET14	Q02196	202 aa		4.23	□□□□□ -1.73
PEP7	YDR323C	HOS3	Q02959	697 aa	Known RBP	4.23	□□□□□ -1.73
PEP7	YDR323C	CWC21	Q03375	135 aa	Known RBP	4.23	□□□□□ -1.73
PEP7	YDR323C	NSE5	Q03718	556 aa		4.23	□□□□□ -1.73
PEP7	YDR323C	NTG2	Q08214	380 aa		4.23	□□□□□ -1.73
PEP7	YDR323C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PEP7	YDR323C	NEW1	Q08972	1196 aa	Known RBP	4.23	□□□□□ -1.73
PEP7	YDR323C	RUD3	Q12234	484 aa	Known RBP	4.23	□□□□□ -1.73
PEP7	YDR323C	TUF1	P02992	437 aa	Known RBP	4.22	□□□□□ -1.73
PEP7	YDR323C	MER1	P16523	270 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	MCM10	P32354	571 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	ARC19	P33204	171 aa	Known RBP	4.22	□□□□□ -1.73
PEP7	YDR323C	RPC37	P36121	282 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	RIM4	P38741	713 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	OTU2	P38747	307 aa	Known RBP	4.22	□□□□□ -1.73
PEP7	YDR323C	RRF1	P38771	230 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
PEP7	YDR323C	VPS41	P38959	992 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	OYE3	P41816	400 aa	Predicted RBP	4.22	□□□□□ -1.73
PEP7	YDR323C	GPD2	P41911	440 aa	Known RBP	4.22	□□□□□ -1.73
PEP7	YDR323C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
PEP7	YDR323C	SAE2	P46946	345 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	SGM1	P47166	707 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	VPS4	P52917	437 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	TNA1	P53322	534 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	COG6	P53959	839 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	YNL034W	P53963	612 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	YNL018C	P53976	612 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	DUS3	Q06053	668 aa	Known RBP	4.22	□□□□□ -1.73
PEP7	YDR323C	YLH47	Q06493	454 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	ARV1	Q06541	321 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	ESC8	Q08119	714 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	YDR056C	Q12025	205 aa		4.22	□□□□□ -1.73
PEP7	YDR323C	SES1	P07284	462 aa	Known RBP	4.21	□□□□□ -1.73
PEP7	YDR323C	RPC40	P07703	335 aa	Known RBP	4.21	□□□□□ -1.73
PEP7	YDR323C	RED1	P14291	827 aa		4.21	□□□□□ -1.73
PEP7	YDR323C	DBP2	P24783	546 aa	Known RBP	4.21	□□□□□ -1.73
PEP7	YDR323C	IMP2'	P32351	346 aa		4.21	□□□□□ -1.73
PEP7	YDR323C	HBS1	P32769	611 aa	Known RBP	4.21	□□□□□ -1.73
PEP7	YDR323C	YSC84	P32793	468 aa		4.21	□□□□□ -1.73
PEP7	YDR323C	GEM1	P39722	662 aa		4.21	□□□□□ -1.73
PEP7	YDR323C	RTA1	P53047	317 aa		4.21	□□□□□ -1.73
PEP7	YDR323C	SHE10	P53075	577 aa		4.21	□□□□□ -1.73
PEP7	YDR323C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.73	not detected
PEP7	YDR323C	TFB2	Q02939	513 aa		4.21	□□□□□ -1.73
PEP7	YDR323C	SSP2	Q08646	371 aa		4.21	□□□□□ -1.73
PEP7	YDR323C	ACM1	Q08981	209 aa		4.21	□□□□□ -1.73
PEP7	YDR323C	FAP7	Q12055	197 aa	Predicted RBP	4.21	□□□□□ -1.73
PEP7	YDR323C	HBN1	Q96VH4	193 aa		4.21	□□□□□ -1.73
PEP7	YDR323C	COQ4	O13525	335 aa		4.21	□□□□□ -1.74
PEP7	YDR323C	ADE8	P04161	214 aa		4.21	□□□□□ -1.74
PEP7	YDR323C	GAL1	P04385	528 aa		4.21	□□□□□ -1.74
PEP7	YDR323C	FUR1	P18562	216 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms