RNA–Protein interactions for RNA: YDR234W

LYS4, Transcript of Homoaconitase, yeastyeast

Gene LYS4, Length 2,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LYS4YDR234W RGA2Q06407 1009 aa11.8□□□□□ -0.52
LYS4YDR234W DED1P06634 604 aaKnown RBP11.79□□□□□ -0.52
LYS4YDR234W VMA2P16140 517 aaKnown RBP11.79□□□□□ -0.52
LYS4YDR234W TKL1P23254 680 aaKnown RBP11.79□□□□□ -0.52
LYS4YDR234W PIN4P34217 668 aaKnown RBP RIP-Chip data11.79□□□□□ -0.52not detected
LYS4YDR234W PEA2P40091 420 aa11.79□□□□□ -0.52
LYS4YDR234W PSY2P40164 858 aa11.79□□□□□ -0.52
LYS4YDR234W ROD1Q02805 837 aa11.79□□□□□ -0.52
LYS4YDR234W YMR187CQ03236 431 aa11.79□□□□□ -0.52
LYS4YDR234W SDH5Q08230 162 aa11.79□□□□□ -0.52
LYS4YDR234W COT1P32798 439 aa11.79□□□□□ -0.52
LYS4YDR234W PBP2P38151 413 aaKnown RBP RIP-Chip data11.79□□□□□ -0.52not detected
LYS4YDR234W VAB2P40003 282 aa11.79□□□□□ -0.52
LYS4YDR234W TDA9Q04545 1251 aa11.79□□□□□ -0.52
LYS4YDR234W SMC5Q08204 1093 aa11.79□□□□□ -0.52
LYS4YDR234W GPI10P30777 616 aa11.78□□□□□ -0.52
LYS4YDR234W MRX3P38172 270 aa11.78□□□□□ -0.52
LYS4YDR234W RTT102P53330 157 aa11.78□□□□□ -0.52
LYS4YDR234W SLD5Q03406 294 aa11.78□□□□□ -0.52
LYS4YDR234W GPI13Q07830 1017 aa11.78□□□□□ -0.52
LYS4YDR234W IES4Q08561 116 aa11.78□□□□□ -0.52
LYS4YDR234W ACM1Q08981 209 aa11.78□□□□□ -0.52
LYS4YDR234W CPR7P47103 393 aa11.77□□□□□ -0.52
LYS4YDR234W YGR130CP53278 816 aa11.77□□□□□ -0.52
LYS4YDR234W PNP1Q05788 311 aa11.77□□□□□ -0.52
LYS4YDR234W RIO1Q12196 484 aaKnown RBP11.77□□□□□ -0.52
LYS4YDR234W PYC1P11154 1178 aaKnown RBP11.77□□□□□ -0.53
LYS4YDR234W TVP38P36164 337 aa11.77□□□□□ -0.53
LYS4YDR234W ORC5P50874 479 aa11.77□□□□□ -0.53
LYS4YDR234W EEB1Q02891 456 aa11.77□□□□□ -0.53
LYS4YDR234W SEC21P32074 935 aaKnown RBP11.76□□□□□ -0.53
LYS4YDR234W ECM2P38241 364 aaKnown RBP11.76□□□□□ -0.53
LYS4YDR234W TRS85P46944 698 aa11.76□□□□□ -0.53
LYS4YDR234W YDR090CQ03193 310 aa11.76□□□□□ -0.53
LYS4YDR234W CWC15Q03772 175 aaKnown RBP11.76□□□□□ -0.53
LYS4YDR234W COQ9Q05779 260 aa11.76□□□□□ -0.53
LYS4YDR234W VPS35P34110 944 aa11.75□□□□□ -0.53
LYS4YDR234W YKR018CP36114 725 aa11.75□□□□□ -0.53
LYS4YDR234W YJR039WP47107 1121 aa11.75□□□□□ -0.53
LYS4YDR234W USA1Q03714 838 aa11.75□□□□□ -0.53
LYS4YDR234W KAR3P17119 729 aa11.75□□□□□ -0.53
LYS4YDR234W CSG2P35206 410 aa11.75□□□□□ -0.53
LYS4YDR234W END3P39013 349 aa11.75□□□□□ -0.53
LYS4YDR234W YGR111WP53265 400 aa11.75□□□□□ -0.53
LYS4YDR234W TPO2P53283 614 aa11.75□□□□□ -0.53
LYS4YDR234W YNL146WP53906 100 aa11.75□□□□□ -0.53
LYS4YDR234W UTP6Q02354 440 aaKnown RBP11.75□□□□□ -0.53
LYS4YDR234W YDR222WQ04925 415 aa11.75□□□□□ -0.53
LYS4YDR234W VMA1P17255 1071 aaKnown RBP11.74□□□□□ -0.53
LYS4YDR234W VMA4P22203 233 aaKnown RBP11.74□□□□□ -0.53
LYS4YDR234W DBF4P32325 704 aa11.74□□□□□ -0.53
LYS4YDR234W SWI3P32591 825 aa11.74□□□□□ -0.53
LYS4YDR234W OAF3P36023 863 aa11.74□□□□□ -0.53
LYS4YDR234W DBP7P36120 742 aaKnown RBP11.74□□□□□ -0.53
LYS4YDR234W TIF5P38431 405 aaKnown RBP11.74□□□□□ -0.53
LYS4YDR234W VPS29P38759 282 aa11.74□□□□□ -0.53
LYS4YDR234W SPC72P39723 622 aa11.74□□□□□ -0.53
LYS4YDR234W SMX2P40204 77 aaKnown RBP11.74□□□□□ -0.53
LYS4YDR234W YTA12P40341 825 aa11.74□□□□□ -0.53
LYS4YDR234W ASG1P40467 964 aa11.74□□□□□ -0.53
LYS4YDR234W RPS7BP48164 190 aaKnown RBP11.74□□□□□ -0.53
LYS4YDR234W ENV11P53246 860 aa11.74□□□□□ -0.53
LYS4YDR234W CDC42P19073 191 aa11.74□□□□□ -0.53
LYS4YDR234W CAP1P28495 268 aaKnown RBP11.74□□□□□ -0.53
LYS4YDR234W GPB2P39717 880 aa11.74□□□□□ -0.53
LYS4YDR234W EAF5P39995 279 aa11.74□□□□□ -0.53
LYS4YDR234W PPM1Q04081 328 aa11.74□□□□□ -0.53
LYS4YDR234W YMR321CQ04898 105 aa11.74□□□□□ -0.53
LYS4YDR234W IWR1Q07532 353 aaPredicted RBP11.74□□□□□ -0.53
LYS4YDR234W YOL087CQ99247 1116 aa11.74□□□□□ -0.53
LYS4YDR234W GYP6P32806 458 aa11.73□□□□□ -0.53
LYS4YDR234W NPP2P39997 493 aa11.73□□□□□ -0.53
LYS4YDR234W HMF1P40037 129 aaKnown RBP11.73□□□□□ -0.53
LYS4YDR234W SAP185P40856 1058 aa11.73□□□□□ -0.53
LYS4YDR234W URB2P47108 1174 aa11.73□□□□□ -0.53
LYS4YDR234W ASN1P49089 572 aaKnown RBP11.73□□□□□ -0.53
LYS4YDR234W ATG1P53104 897 aa11.73□□□□□ -0.53
LYS4YDR234W CPR6P53691 371 aaKnown RBP11.73□□□□□ -0.53
LYS4YDR234W RPA49Q01080 415 aaPredicted RBP11.73□□□□□ -0.53
LYS4YDR234W PUS5Q06244 254 aa11.73□□□□□ -0.53
LYS4YDR234W OSW2Q12202 724 aa11.73□□□□□ -0.53
LYS4YDR234W CDC19P00549 500 aaKnown RBP11.72□□□□□ -0.53
LYS4YDR234W RNR1P21524 888 aaKnown RBP11.72□□□□□ -0.53
LYS4YDR234W SAK1P38990 1142 aa11.72□□□□□ -0.53
LYS4YDR234W DRN1P53255 507 aaKnown RBP11.72□□□□□ -0.53
LYS4YDR234W YGR125WP53273 1036 aa11.72□□□□□ -0.53
LYS4YDR234W PUF4P25339 888 aaKnown RBP RIP-Chip data11.72□□□□□ -0.53not detected
LYS4YDR234W TFC4P33339 1025 aa11.72□□□□□ -0.53
LYS4YDR234W YBL055CP34220 418 aaPredicted RBP11.72□□□□□ -0.53
LYS4YDR234W MSG5P38590 489 aa11.72□□□□□ -0.53
LYS4YDR234W SBE2P42223 864 aaKnown RBP11.72□□□□□ -0.53
LYS4YDR234W PHO86P46956 311 aa11.72□□□□□ -0.53
LYS4YDR234W DAS1P47005 663 aa11.72□□□□□ -0.53
LYS4YDR234W MTG1Q03151 367 aaPredicted RBP11.72□□□□□ -0.53
LYS4YDR234W PIG1Q06216 648 aa11.72□□□□□ -0.53
LYS4YDR234W IXR1P33417 597 aa11.71□□□□□ -0.53
LYS4YDR234W ATG16Q03818 150 aa11.71□□□□□ -0.53
LYS4YDR234W FRA1Q07825 749 aa11.71□□□□□ -0.53
LYS4YDR234W CFT2Q12102 859 aaPredicted RBP11.71□□□□□ -0.53
LYS4YDR234W PRE10P21242 288 aaKnown RBP RIP-Chip data11.71□□□□□ -0.54not detected
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms