RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C CDC20P26309 610 aa6.57□□□□□ -1.36
RTN1YDR233C SAP190P36123 1033 aa6.57□□□□□ -1.36
RTN1YDR233C AIM3P38266 947 aaKnown RBP6.57□□□□□ -1.36
RTN1YDR233C CHA4P43634 648 aa6.57□□□□□ -1.36
RTN1YDR233C UME1Q03010 460 aa6.57□□□□□ -1.36
RTN1YDR233C GUP2Q08929 609 aa6.57□□□□□ -1.36
RTN1YDR233C SHR5P41912 237 aa6.56□□□□□ -1.36
RTN1YDR233C PMT3P47190 753 aa6.56□□□□□ -1.36
RTN1YDR233C YGR237CP50089 785 aa6.56□□□□□ -1.36
RTN1YDR233C UBC9P50623 157 aaPredicted RBP6.56□□□□□ -1.36
RTN1YDR233C NCS6P53088 359 aa6.56□□□□□ -1.36
RTN1YDR233C RXT3Q07458 294 aa6.56□□□□□ -1.36
RTN1YDR233C ACK1Q07622 623 aaPredicted RBP6.56□□□□□ -1.36
RTN1YDR233C RPN10P38886 268 aaKnown RBP6.55□□□□□ -1.36
RTN1YDR233C SPT20P50875 604 aa6.55□□□□□ -1.36
RTN1YDR233C ZIP2P53061 704 aa6.55□□□□□ -1.36
RTN1YDR233C CRR1Q05790 422 aa6.55□□□□□ -1.36
RTN1YDR233C YLR149CQ99296 730 aa6.55□□□□□ -1.36
RTN1YDR233C Q0142Q9ZZW4 58 aa6.55□□□□□ -1.36
RTN1YDR233C SOD2P00447 233 aa6.54□□□□□ -1.36
RTN1YDR233C YKR051WP36142 418 aa6.54□□□□□ -1.36
RTN1YDR233C TYS1P36421 394 aaKnown RBP6.54□□□□□ -1.36
RTN1YDR233C YJR096WP47137 282 aa6.54□□□□□ -1.36
RTN1YDR233C GUD1Q07729 489 aa6.54□□□□□ -1.36
RTN1YDR233C NOP12Q08208 459 aaKnown RBP6.54□□□□□ -1.36
RTN1YDR233C GIN4Q12263 1142 aa6.54□□□□□ -1.36
RTN1YDR233C SSB1P11484 613 aaKnown RBP6.53□□□□□ -1.36
RTN1YDR233C CCR4P31384 837 aaKnown RBP6.53□□□□□ -1.36
RTN1YDR233C YHR078WP38799 552 aa6.53□□□□□ -1.36
RTN1YDR233C SSB2P40150 613 aaKnown RBP6.53□□□□□ -1.36
RTN1YDR233C RIM8P53179 542 aa6.53□□□□□ -1.36
RTN1YDR233C SLU7Q02775 382 aaKnown RBP6.53□□□□□ -1.36
RTN1YDR233C MTQ2Q03920 221 aaPredicted RBP6.53□□□□□ -1.36
RTN1YDR233C YLR224WQ05947 369 aa6.53□□□□□ -1.36
RTN1YDR233C GPR1Q12361 961 aa6.53□□□□□ -1.36
RTN1YDR233C RPP2AP05319 106 aaKnown RBP6.52□□□□□ -1.37
RTN1YDR233C TUB3P09734 445 aaKnown RBP6.52□□□□□ -1.37
RTN1YDR233C SED4P25365 1065 aa6.52□□□□□ -1.37
RTN1YDR233C HSL7P38274 827 aa6.52□□□□□ -1.37
RTN1YDR233C SSY5P47002 699 aa6.52□□□□□ -1.37
RTN1YDR233C BNA2P47125 453 aa6.52□□□□□ -1.37
RTN1YDR233C ASM4Q05166 528 aa6.52□□□□□ -1.37
RTN1YDR233C NPC2Q12408 173 aa6.52□□□□□ -1.37
RTN1YDR233C KCS1Q12494 1050 aa6.52□□□□□ -1.37
RTN1YDR233C PRP6P19735 899 aaPredicted RBP6.51□□□□□ -1.37
RTN1YDR233C PRP4P20053 465 aaKnown RBP6.51□□□□□ -1.37
RTN1YDR233C RNQ1P25367 405 aa6.51□□□□□ -1.37
RTN1YDR233C SEC21P32074 935 aaKnown RBP6.51□□□□□ -1.37
RTN1YDR233C PLB1P39105 664 aa6.51□□□□□ -1.37
RTN1YDR233C GPP1P41277 250 aaKnown RBP6.51□□□□□ -1.37
RTN1YDR233C NPY1P53164 384 aa6.51□□□□□ -1.37
RTN1YDR233C FLR1P38124 548 aa6.5□□□□□ -1.37
RTN1YDR233C CKB2P38930 258 aa6.5□□□□□ -1.37
RTN1YDR233C DOT6P40059 670 aaKnown RBP6.5□□□□□ -1.37
RTN1YDR233C NIT1P40447 199 aa6.5□□□□□ -1.37
RTN1YDR233C PRP43P53131 767 aaKnown RBP6.5□□□□□ -1.37
RTN1YDR233C PRP19P32523 503 aaKnown RBP6.49□□□□□ -1.37
RTN1YDR233C ELM1P32801 640 aa6.49□□□□□ -1.37
RTN1YDR233C LST4P34239 828 aa6.49□□□□□ -1.37
RTN1YDR233C THI80P35202 319 aa6.49□□□□□ -1.37
RTN1YDR233C MSS4P38994 779 aa6.49□□□□□ -1.37
RTN1YDR233C YFL052WP43551 465 aa6.49□□□□□ -1.37
RTN1YDR233C RPN7Q06103 429 aaKnown RBP6.49□□□□□ -1.37
RTN1YDR233C FAP7Q12055 197 aaPredicted RBP6.49□□□□□ -1.37
RTN1YDR233C TOD6P34219 525 aa6.48□□□□□ -1.37
RTN1YDR233C YKR018CP36114 725 aa6.48□□□□□ -1.37
RTN1YDR233C SAK1P38990 1142 aa6.48□□□□□ -1.37
RTN1YDR233C PFA3P42836 336 aa6.48□□□□□ -1.37
RTN1YDR233C AVT1P47082 602 aa6.48□□□□□ -1.37
RTN1YDR233C ASI2P53895 289 aa6.48□□□□□ -1.37
RTN1YDR233C ARP4P80428 489 aa6.48□□□□□ -1.37
RTN1YDR233C MUS81Q04149 632 aaPredicted RBP6.48□□□□□ -1.37
RTN1YDR233C PRE10P21242 288 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
RTN1YDR233C TMA10Q06177 86 aa6.47□□□□□ -1.37
RTN1YDR233C TMA17Q12513 150 aa6.47□□□□□ -1.37
RTN1YDR233C PAF1P38351 445 aa6.46□□□□□ -1.38
RTN1YDR233C VHR1P40522 640 aa6.46□□□□□ -1.38
RTN1YDR233C HFD1Q04458 532 aa6.46□□□□□ -1.38
RTN1YDR233C DCS2Q12123 353 aa6.46□□□□□ -1.38
RTN1YDR233C KAR4P25583 335 aa6.45□□□□□ -1.38
RTN1YDR233C MNN4P36044 1178 aa6.45□□□□□ -1.38
RTN1YDR233C YJR120WP47157 116 aa6.45□□□□□ -1.38
RTN1YDR233C EXG2P52911 562 aa6.45□□□□□ -1.38
RTN1YDR233C PCL10P53124 433 aa6.45□□□□□ -1.38
RTN1YDR233C LAS17Q12446 633 aa6.45□□□□□ -1.38
RTN1YDR233C OAF1P39720 1047 aaPredicted RBP6.44□□□□□ -1.38
RTN1YDR233C PZF1P39933 429 aa6.44□□□□□ -1.38
RTN1YDR233C RET2P43621 546 aa6.44□□□□□ -1.38
RTN1YDR233C MTR3P48240 250 aaPredicted RBP6.44□□□□□ -1.38
RTN1YDR233C YTM1Q12024 460 aaPredicted RBP6.44□□□□□ -1.38
RTN1YDR233C EUG1P32474 517 aa6.43□□□□□ -1.38
RTN1YDR233C TOM20P35180 183 aa6.43□□□□□ -1.38
RTN1YDR233C MIP6P38760 659 aaKnown RBP6.43□□□□□ -1.38
RTN1YDR233C CCT5P40413 562 aaKnown RBP6.43□□□□□ -1.38
RTN1YDR233C GZF3P42944 551 aaKnown RBP6.43□□□□□ -1.38
RTN1YDR233C ECM9Q02202 377 aa6.43□□□□□ -1.38
RTN1YDR233C LEE1Q02799 301 aaKnown RBP6.43□□□□□ -1.38
RTN1YDR233C SWM1Q12379 170 aa6.43□□□□□ -1.38
RTN1YDR233C SIC1P38634 284 aa6.42□□□□□ -1.38
RTN1YDR233C TDA3P38758 523 aa6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms