RNA–Protein interactions for RNA: YDR224C

HTB1, Transcript of Histone H2B, yeast

Gene HTB1, Length 396 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTB1	YDR224C	TRM13	Q12383	476 aa		5.03	□□□□□ -1.6
HTB1	YDR224C	PHO8	P11491	566 aa		5.02	□□□□□ -1.61
HTB1	YDR224C	URA1	P28272	314 aa	Predicted RBP	5.02	□□□□□ -1.61
HTB1	YDR224C	SEC21	P32074	935 aa	Known RBP	5.02	□□□□□ -1.61
HTB1	YDR224C	RPD3	P32561	433 aa		5.02	□□□□□ -1.61
HTB1	YDR224C	TYE7	P33122	291 aa	Predicted RBP	5.02	□□□□□ -1.61
HTB1	YDR224C	DAS1	P47005	663 aa		5.02	□□□□□ -1.61
HTB1	YDR224C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
HTB1	YDR224C	HSV2	P50079	448 aa	Predicted RBP	5.02	□□□□□ -1.61
HTB1	YDR224C	NOG2	P53742	486 aa	Known RBP	5.02	□□□□□ -1.61
HTB1	YDR224C	YKR011C	Q02209	353 aa		5.02	□□□□□ -1.61
HTB1	YDR224C	YDR514C	Q04408	483 aa		5.02	□□□□□ -1.61
HTB1	YDR224C	YLR125W	Q12138	136 aa		5.02	□□□□□ -1.61
HTB1	YDR224C	EMC3	P36039	253 aa		5.01	□□□□□ -1.61
HTB1	YDR224C	GDH3	P39708	457 aa		5.01	□□□□□ -1.61
HTB1	YDR224C	YGR283C	P53336	341 aa	Predicted RBP	5.01	□□□□□ -1.61
HTB1	YDR224C	HDA1	P53973	706 aa		5.01	□□□□□ -1.61
HTB1	YDR224C	DLT1	Q04216	342 aa		5.01	□□□□□ -1.61
HTB1	YDR224C	FRE5	Q08908	694 aa		5.01	□□□□□ -1.61
HTB1	YDR224C	SWM1	Q12379	170 aa		5.01	□□□□□ -1.61
HTB1	YDR224C	DAL7	P21826	554 aa		5	□□□□□ -1.61
HTB1	YDR224C	CYS3	P31373	394 aa	Known RBP	5	□□□□□ -1.61
HTB1	YDR224C	THI4	P32318	326 aa		5	□□□□□ -1.61
HTB1	YDR224C	CTF13	P35203	478 aa		5	□□□□□ -1.61
HTB1	YDR224C	SDP1	P40479	209 aa		5	□□□□□ -1.61
HTB1	YDR224C	SDS3	P40505	327 aa		5	□□□□□ -1.61
HTB1	YDR224C	GYP8	P43570	497 aa		5	□□□□□ -1.61
HTB1	YDR224C	PUS2	P53167	370 aa		5	□□□□□ -1.61
HTB1	YDR224C	TRM11	Q12463	433 aa		5	□□□□□ -1.61
HTB1	YDR224C	SAP190	P36123	1033 aa		4.99	□□□□□ -1.61
HTB1	YDR224C	PPS1	P38148	807 aa		4.99	□□□□□ -1.61
HTB1	YDR224C	YHL017W	P38745	532 aa		4.99	□□□□□ -1.61
HTB1	YDR224C	MET6	P05694	767 aa	Known RBP	4.98	□□□□□ -1.61
HTB1	YDR224C	PPG1	P32838	368 aa		4.98	□□□□□ -1.61
HTB1	YDR224C	SPC29	P33419	253 aa		4.98	□□□□□ -1.61
HTB1	YDR224C	ELO3	P40319	345 aa		4.98	□□□□□ -1.61
HTB1	YDR224C	TAD1	P53065	400 aa		4.98	□□□□□ -1.61
HTB1	YDR224C	REH1	Q06709	432 aa		4.98	□□□□□ -1.61
HTB1	YDR224C	MET7	Q08645	548 aa		4.98	□□□□□ -1.61
HTB1	YDR224C	NDJ1	Q12366	352 aa		4.98	□□□□□ -1.61
HTB1	YDR224C	FBP1	P09201	348 aa		4.97	□□□□□ -1.61
HTB1	YDR224C	RNH70	P53331	553 aa		4.97	□□□□□ -1.61
HTB1	YDR224C	PRC1	P00729	532 aa		4.96	□□□□□ -1.62
HTB1	YDR224C	CAF20	P12962	161 aa	Known RBP	4.96	□□□□□ -1.62
HTB1	YDR224C	ATP25	Q03153	612 aa		4.96	□□□□□ -1.62
HTB1	YDR224C	LRS4	Q04087	347 aa	Known RBP	4.96	□□□□□ -1.62
HTB1	YDR224C	MRH1	Q12117	320 aa	Predicted RBP	4.96	□□□□□ -1.62
HTB1	YDR224C	GSY1	P23337	708 aa		4.95	□□□□□ -1.62
HTB1	YDR224C	YCL002C	P25565	263 aa		4.95	□□□□□ -1.62
HTB1	YDR224C	CTF8	P38877	133 aa		4.95	□□□□□ -1.62
HTB1	YDR224C	ZDS1	P50111	915 aa	Known RBP	4.95	□□□□□ -1.62
HTB1	YDR224C	MAL11	P53048	616 aa		4.95	□□□□□ -1.62
HTB1	YDR224C	POB3	Q04636	552 aa	Known RBP	4.95	□□□□□ -1.62
HTB1	YDR224C	ADY4	Q05955	493 aa		4.95	□□□□□ -1.62
HTB1	YDR224C	YOR022C	Q12204	715 aa		4.95	□□□□□ -1.62
HTB1	YDR224C	TUB3	P09734	445 aa	Known RBP	4.94	□□□□□ -1.62
HTB1	YDR224C	GFA1	P14742	717 aa	Known RBP	4.94	□□□□□ -1.62
HTB1	YDR224C	PER1	P25625	357 aa		4.94	□□□□□ -1.62
HTB1	YDR224C	MSH2	P25847	964 aa		4.94	□□□□□ -1.62
HTB1	YDR224C	PEX2	P32800	271 aa		4.94	□□□□□ -1.62
HTB1	YDR224C	RPP1	P38786	293 aa		4.94	□□□□□ -1.62
HTB1	YDR224C	YHR078W	P38799	552 aa		4.94	□□□□□ -1.62
HTB1	YDR224C	DSS1	P39112	969 aa		4.94	□□□□□ -1.62
HTB1	YDR224C	SHR5	P41912	237 aa		4.94	□□□□□ -1.62
HTB1	YDR224C	ORC1	P54784	914 aa	Predicted RBP	4.94	□□□□□ -1.62
HTB1	YDR224C	RSC3	Q06639	885 aa		4.94	□□□□□ -1.62
HTB1	YDR224C	HAL9	Q12180	1030 aa		4.94	□□□□□ -1.62
HTB1	YDR224C	MDM12	Q92328	271 aa		4.94	□□□□□ -1.62
HTB1	YDR224C	PEX6	P33760	1030 aa		4.93	□□□□□ -1.62
HTB1	YDR224C	RRP14	P36080	434 aa	Known RBP	4.93	□□□□□ -1.62
HTB1	YDR224C	SET5	P38890	526 aa	Known RBP	4.93	□□□□□ -1.62
HTB1	YDR224C	DUS1	P53759	423 aa	Known RBP	4.93	□□□□□ -1.62
HTB1	YDR224C	UGO1	Q03327	502 aa		4.93	□□□□□ -1.62
HTB1	YDR224C	CRR1	Q05790	422 aa		4.93	□□□□□ -1.62
HTB1	YDR224C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
HTB1	YDR224C	DIF1	O13577	133 aa		4.92	□□□□□ -1.62
HTB1	YDR224C	NMD2	P38798	1089 aa	Known RBP	4.92	□□□□□ -1.62
HTB1	YDR224C	RLP7	P40693	322 aa	Known RBP	4.92	□□□□□ -1.62
HTB1	YDR224C	FKH2	P41813	862 aa		4.92	□□□□□ -1.62
HTB1	YDR224C	ALY2	P47029	1046 aa		4.92	□□□□□ -1.62
HTB1	YDR224C	MUP1	P50276	574 aa		4.92	□□□□□ -1.62
HTB1	YDR224C	ALG12	P53730	551 aa		4.92	□□□□□ -1.62
HTB1	YDR224C	CDC43	P18898	376 aa		4.91	□□□□□ -1.62
HTB1	YDR224C	VBA3	P25594	458 aa		4.91	□□□□□ -1.62
HTB1	YDR224C	PPZ2	P33329	710 aa		4.91	□□□□□ -1.62
HTB1	YDR224C	STO1	P34160	861 aa	Known RBP	4.91	□□□□□ -1.62
HTB1	YDR224C	MTC2	P34246	357 aa		4.91	□□□□□ -1.62
HTB1	YDR224C	TDP1	P38319	544 aa		4.91	□□□□□ -1.62
HTB1	YDR224C	PZF1	P39933	429 aa		4.91	□□□□□ -1.62
HTB1	YDR224C	SSY5	P47002	699 aa		4.91	□□□□□ -1.62
HTB1	YDR224C	TY4A-J	P47023	414 aa		4.91	□□□□□ -1.62
HTB1	YDR224C	YBR182C-A	Q8TGU6	64 aa		4.91	□□□□□ -1.62
HTB1	YDR224C	CDC9	P04819	755 aa		4.9	□□□□□ -1.63
HTB1	YDR224C	HCA4	P20448	770 aa	Known RBP	4.9	□□□□□ -1.63
HTB1	YDR224C	RPN10	P38886	268 aa	Known RBP	4.9	□□□□□ -1.63
HTB1	YDR224C	NGG1	P32494	702 aa		4.89	□□□□□ -1.63
HTB1	YDR224C	PCL5	P38794	229 aa		4.89	□□□□□ -1.63
HTB1	YDR224C	SAK1	P38990	1142 aa		4.89	□□□□□ -1.63
HTB1	YDR224C	CAF16	P43569	289 aa		4.89	□□□□□ -1.63
HTB1	YDR224C	AMA1	P50082	593 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms