RNA–Protein interactions for RNA: YDR205W

MSC2, Transcript of Endoplasmic reticulum zinc transporter, yeast

Gene MSC2, Length 2,175 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC2	YDR205W	MSH3	P25336	1018 aa		4.94	□□□□□ -1.62
MSC2	YDR205W	ECM32	P32644	1121 aa	Known RBP	4.94	□□□□□ -1.62
MSC2	YDR205W	UGA4	P32837	571 aa		4.94	□□□□□ -1.62
MSC2	YDR205W	SHM1	P37292	490 aa	Predicted RBP	4.94	□□□□□ -1.62
MSC2	YDR205W	NDE1	P40215	560 aa		4.94	□□□□□ -1.62
MSC2	YDR205W	TCB2	P48231	1178 aa		4.94	□□□□□ -1.62
MSC2	YDR205W	SPC105	P53148	917 aa		4.94	□□□□□ -1.62
MSC2	YDR205W	YGR053C	P53234	283 aa		4.94	□□□□□ -1.62
MSC2	YDR205W	SXM1	Q04175	944 aa	Known RBP	4.94	□□□□□ -1.62
MSC2	YDR205W	PET111	P08468	800 aa		4.93	□□□□□ -1.62
MSC2	YDR205W	OM45	P16547	393 aa		4.93	□□□□□ -1.62
MSC2	YDR205W	PSO2	P30620	661 aa		4.93	□□□□□ -1.62
MSC2	YDR205W	MRF1	P30775	413 aa	Predicted RBP	4.93	□□□□□ -1.62
MSC2	YDR205W	PHO88	P38264	188 aa	Predicted RBP	4.93	□□□□□ -1.62
MSC2	YDR205W	MIP6	P38760	659 aa	Known RBP	4.93	□□□□□ -1.62
MSC2	YDR205W	ACA1	P39970	489 aa		4.93	□□□□□ -1.62
MSC2	YDR205W	TAF1	P46677	1066 aa		4.93	□□□□□ -1.62
MSC2	YDR205W	GPI8	P49018	411 aa		4.93	□□□□□ -1.62
MSC2	YDR205W	YLH47	Q06493	454 aa		4.93	□□□□□ -1.62
MSC2	YDR205W	TLG2	Q08144	397 aa		4.93	□□□□□ -1.62
MSC2	YDR205W	YAP7	Q08182	245 aa		4.93	□□□□□ -1.62
MSC2	YDR205W	TFB4	Q12004	338 aa		4.93	□□□□□ -1.62
MSC2	YDR205W	HMI1	Q12039	706 aa		4.93	□□□□□ -1.62
MSC2	YDR205W	INH1	P01097	85 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	SPT2	P06843	333 aa	Predicted RBP	4.92	□□□□□ -1.62
MSC2	YDR205W	CYT1	P07143	309 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	NPR1	P22211	790 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	STE5	P32917	917 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	PEA2	P40091	420 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	CEP3	P40969	608 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	HOL1	P53389	586 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	ORC4	P54791	529 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	VPS38	Q05919	439 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	GUD1	Q07729	489 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	BUD20	Q08004	166 aa	Predicted RBP	4.92	□□□□□ -1.62
MSC2	YDR205W	NEW1	Q08972	1196 aa	Known RBP	4.92	□□□□□ -1.62
MSC2	YDR205W	APL4	Q12028	832 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	ARP6	Q12509	438 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	ILV1	P00927	576 aa	Known RBP	4.92	□□□□□ -1.62
MSC2	YDR205W	CDC31	P06704	161 aa	Known RBP	4.92	□□□□□ -1.62
MSC2	YDR205W	RPS6A	P0CX37	236 aa	Known RBP	4.92	□□□□□ -1.62
MSC2	YDR205W	RPS6B	P0CX38	236 aa	Predicted RBP	4.92	□□□□□ -1.62
MSC2	YDR205W	RAD18	P10862	487 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	KRS1	P15180	591 aa	Known RBP	4.92	□□□□□ -1.62
MSC2	YDR205W	PER1	P25625	357 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	SEC65	P29478	273 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	PGM1	P33401	570 aa	Known RBP	4.92	□□□□□ -1.62
MSC2	YDR205W	KTR2	P33550	425 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	APE4	P38821	490 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	SPT8	P38915	602 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	VFA1	P40080	203 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	HUL4	P40985	892 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	LIF1	P53150	421 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	YML037C	Q03703	340 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	PHM6	Q05637	104 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	TCO89	Q08921	799 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	OXR1	Q08952	273 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	PLP2	Q12017	286 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	REC8	Q12188	680 aa		4.92	□□□□□ -1.62
MSC2	YDR205W	CAN1	P04817	590 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	RPP1B	P10622	106 aa	Known RBP	4.91	□□□□□ -1.62
MSC2	YDR205W	CDC34	P14682	295 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	SEC23	P15303	768 aa	Known RBP	4.91	□□□□□ -1.62
MSC2	YDR205W	PCH2	P38126	564 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	SIP3	P38717	1229 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	NDT80	P38830	627 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	RTT107	P38850	1070 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	CCC2	P38995	1004 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	FAA3	P39002	694 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	ISM1	P48526	1002 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	HFM1	P51979	1187 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	GUP1	P53154	560 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	CNM67	P53865	581 aa	Known RBP	4.91	□□□□□ -1.62
MSC2	YDR205W	YNL058C	P53947	316 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	ERG5	P54781	538 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	VPS60	Q03390	229 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	YLR287C	Q05881	355 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	WHI4	Q07655	649 aa	Known RBP	4.91	□□□□□ -1.62
MSC2	YDR205W	YOL075C	Q08234	1294 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	ATG9	Q12142	997 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
MSC2	YDR205W	PFK1	P16861	987 aa	Known RBP	4.91	□□□□□ -1.62
MSC2	YDR205W	SLY41	P22215	453 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	STE11	P23561	717 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	RPC53	P25441	422 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	BRF1	P29056	596 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	SSH4	P32343	579 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	VPS35	P34110	944 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	TGL1	P34163	548 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	OCT1	P35999	772 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	YBR071W	P38243	211 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	TCD1	P38756	429 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	ESL1	P40456	1118 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	SPR3	P41901	512 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	SRB7	P47822	140 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	VID30	P53076	958 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	PGA2	P53903	129 aa		4.91	□□□□□ -1.62
MSC2	YDR205W	CCP1	P00431	361 aa		4.9	□□□□□ -1.62
MSC2	YDR205W	TRM1	P15565	570 aa	Known RBP	4.9	□□□□□ -1.62
MSC2	YDR205W	APA1	P16550	321 aa	Known RBP	4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 221.2 ms