RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	MDM20	Q12387	796 aa	Known RBP	4.25	□□□□□ -1.73
VMA1	YDL185W	URA4	P20051	364 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	GDA1	P32621	518 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	APL2	P36000	726 aa	Predicted RBP	4.25	□□□□□ -1.73
VMA1	YDL185W	TBS1	P38114	1094 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	RFX1	P48743	811 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	ACL4	Q03771	387 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	ATG17	Q06410	417 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	ATG13	Q06628	738 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	RPN8	Q08723	338 aa	Known RBP	4.25	□□□□□ -1.73
VMA1	YDL185W	TAH18	Q12181	623 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	TAF3	Q12297	353 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	HIF1	Q12373	385 aa		4.25	□□□□□ -1.73
VMA1	YDL185W	CHO2	P05374	869 aa	Known RBP	4.24	□□□□□ -1.73
VMA1	YDL185W	ALG1	P16661	449 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	CNA1	P23287	553 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	NIP100	P33420	868 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	YKR015C	P36111	568 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	FES1	P38260	290 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	BIM1	P40013	344 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	AIM21	P40563	679 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	ATG1	P53104	897 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	YML108W	Q03759	105 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	YPL216W	Q08964	1102 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	ACM1	Q08981	209 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	AIM41	Q12032	185 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	HEM1	P09950	548 aa	Predicted RBP	4.24	□□□□□ -1.73
VMA1	YDL185W	PEP5	P12868	1029 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	OSM1	P21375	501 aa	Known RBP	4.24	□□□□□ -1.73
VMA1	YDL185W	RCN1	P36054	211 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	PIM1	P36775	1133 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	MMM1	P41800	426 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	HOP2	P53187	214 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	YGR054W	P53235	642 aa	Known RBP	4.24	□□□□□ -1.73
VMA1	YDL185W	YMR187C	Q03236	431 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	TDA9	Q04545	1251 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	YPR204W	Q08995	1032 aa		4.24	□□□□□ -1.73
VMA1	YDL185W	ILV2	P07342	687 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	SMY1	P32364	656 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	PLC1	P32383	869 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	HES1	P35843	434 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	JNM1	P36224	373 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	RXT2	P38255	430 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	RCK2	P38623	610 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	SMC2	P38989	1170 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	SAK1	P38990	1142 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	NPT1	P39683	429 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	USE1	P53146	245 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	DRN1	P53255	507 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	UTP14	Q04500	899 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	YDR278C	Q05612	105 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	DNL4	Q08387	944 aa	Predicted RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	RUP1	Q12242	671 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	WHI5	Q12416	295 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	VPS5	Q92331	675 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	YPT6	Q99260	215 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	MPH2	P0CD99	609 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	VMA2	P16140	517 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	GEF1	P37020	779 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	CSN12	P47130	423 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	ECL1	P48235	211 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	CIK1	Q01649	594 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	EEB1	Q02891	456 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	HMO1	Q03973	246 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	YML082W	Q04533	649 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	TFC6	Q06339	672 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	SEM1	O94742	89 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	RSR1	P13856	272 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	TEC1	P18412	486 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	COQ1	P18900	473 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	ITR2	P30606	609 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	BCK2	P33306	851 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	PPS1	P38148	807 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	MUM2	P38236	366 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	SPL2	P38839	148 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	AST2	P39945	430 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	LCP5	P40079	357 aa	Predicted RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	DAN4	P47179	1161 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	DCP2	P53550	970 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	NAF1	P53919	492 aa	Known RBP	4.23	□□□□□ -1.73
VMA1	YDL185W	MDM1	Q01846	1127 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	MEC3	Q02574	474 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	SCM3	Q12334	223 aa		4.23	□□□□□ -1.73
VMA1	YDL185W	CLB2	P24869	491 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	GPI10	P30777	616 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	XRS2	P33301	854 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	YKR078W	P36158	585 aa	Known RBP	4.22	□□□□□ -1.73
VMA1	YDL185W	MMS21	P38632	267 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	STS1	P38637	319 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	VMA22	P38784	181 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	HAL5	P38970	855 aa	Known RBP	4.22	□□□□□ -1.73
VMA1	YDL185W	OAF1	P39720	1047 aa	Predicted RBP	4.22	□□□□□ -1.73
VMA1	YDL185W	YGL176C	P46945	554 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	TAF6	P53040	516 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	HPC2	Q01448	625 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	FMN1	Q03778	218 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	COA4	Q05809	96 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	NBL1	Q3E7Y6	73 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	RAD61	Q99359	647 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	EFT1	P32324	842 aa	Known RBP	4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 114.2 ms