RNA–Protein interactions for RNA: YBL101C

ECM21, Transcript of Protein involved in regulating endocytosis of plasma membrane proteins, yeast

Gene ECM21, Length 3,354 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM21	YBL101C	VPS53	P47061	822 aa		3.21	□□□□□ -1.89
ECM21	YBL101C	TAM41	P53230	385 aa		3.21	□□□□□ -1.89
ECM21	YBL101C	CIR2	Q08822	631 aa		3.21	□□□□□ -1.89
ECM21	YBL101C	SPE3	Q12074	293 aa	Known RBP	3.21	□□□□□ -1.89
ECM21	YBL101C	SLY41	P22215	453 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	MSS51	P32335	436 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	PSF2	P40359	213 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	CBK1	P53894	756 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	YPL062W	Q02781	134 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	MSC2	Q03455	724 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	SKY1	Q03656	742 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	GIS4	Q04233	774 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	ADY4	Q05955	493 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	NEW1	Q08972	1196 aa	Known RBP	3.21	□□□□□ -1.9
ECM21	YBL101C	YDL206W	Q12424	762 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	LSO1	Q3E827	93 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	TRM1	P15565	570 aa	Known RBP	3.21	□□□□□ -1.9
ECM21	YBL101C	PHO13	P19881	312 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
ECM21	YBL101C	HXT1	P32465	570 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	UIP5	P36137	443 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	COG8	Q04632	607 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	ERV41	Q04651	352 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	SMC6	Q12749	1114 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	YDR524C-B	Q3E6R4	66 aa		3.21	□□□□□ -1.9
ECM21	YBL101C	HXK1	P04806	485 aa	Known RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	CRP1	P38845	465 aa	Known RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	IES5	P40060	125 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	YER186C	P40101	306 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	RPS0B	P46654	252 aa	Known RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	STU2	P46675	888 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	FOL2	P51601	243 aa	Known RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	NBP1	P52919	319 aa	Predicted RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	ESBP6	P53918	673 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	VPS13	Q07878	3144 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	TPK1	P06244	397 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	CYC8	P14922	966 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	CDC42	P19073	191 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	NAM7	P30771	971 aa	Known RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	SMY2	P32909	740 aa	Known RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	LDH1	P38139	375 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	SMC3	P47037	1230 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	YNL146W	P53906	100 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	NCS2	P53923	493 aa	Predicted RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	ARP5	P53946	755 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	AIM33	Q04516	312 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	MED1	Q12321	566 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	YOR131C	Q12486	218 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	NOP14	Q99207	810 aa	Known RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	ILV1	P00927	576 aa	Known RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	COX11	P19516	300 aa	Known RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	CLN2	P20438	545 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	PAH1	P32567	862 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	KTR2	P33550	425 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	PET10	P36139	283 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	HMT1	P38074	348 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	MAP2	P38174	421 aa	Known RBP	3.2	□□□□□ -1.9
ECM21	YBL101C	CUL3	P53202	744 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	RSC1	P53236	928 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	RTT102	P53330	157 aa		3.2	□□□□□ -1.9
ECM21	YBL101C	HSP82	P02829	709 aa	Known RBP	3.19	□□□□□ -1.9
ECM21	YBL101C	MAS2	P11914	482 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	PFK1	P16861	987 aa	Known RBP	3.19	□□□□□ -1.9
ECM21	YBL101C	KDX1	P36005	433 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	RIX1	P38883	763 aa	Predicted RBP	3.19	□□□□□ -1.9
ECM21	YBL101C	CEP3	P40969	608 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	YJR120W	P47157	116 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	HFM1	P51979	1187 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	CEF1	Q03654	590 aa	Predicted RBP	3.19	□□□□□ -1.9
ECM21	YBL101C	DOT1	Q04089	582 aa	Known RBP	3.19	□□□□□ -1.9
ECM21	YBL101C	RTP1	Q12751	981 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	ERR1	P0CX10	437 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	ERR2	P0CX11	437 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	HAP4	P14064	554 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	IRE1	P32361	1115 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	YKL069W	P36088	180 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	TCD1	P38756	429 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	RSM25	P40496	264 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	OPT1	P40897	799 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	RPS7B	P48164	190 aa	Known RBP	3.19	□□□□□ -1.9
ECM21	YBL101C	UBP15	P50101	1230 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	GUP1	P53154	560 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	DIP5	P53388	608 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	BRE5	P53741	515 aa	Known RBP	3.19	□□□□□ -1.9
ECM21	YBL101C	UTP14	Q04500	899 aa	Known RBP	3.19	□□□□□ -1.9
ECM21	YBL101C	YPR084W	Q06821	456 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	SMC5	Q08204	1093 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	PCD1	Q12524	340 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	NBL1	Q3E7Y6	73 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	YOL087C	Q99247	1116 aa		3.19	□□□□□ -1.9
ECM21	YBL101C	YEL1	P34225	687 aa		3.18	□□□□□ -1.9
ECM21	YBL101C	RIM4	P38741	713 aa		3.18	□□□□□ -1.9
ECM21	YBL101C	YER130C	P39959	443 aa		3.18	□□□□□ -1.9
ECM21	YBL101C	HOS4	P40480	1083 aa		3.18	□□□□□ -1.9
ECM21	YBL101C	ZAP1	P47043	880 aa		3.18	□□□□□ -1.9
ECM21	YBL101C	STR2	P47164	639 aa		3.18	□□□□□ -1.9
ECM21	YBL101C	FAA4	P47912	694 aa	Known RBP	3.18	□□□□□ -1.9
ECM21	YBL101C	AZR1	P50080	613 aa		3.18	□□□□□ -1.9
ECM21	YBL101C	YGR237C	P50089	785 aa		3.18	□□□□□ -1.9
ECM21	YBL101C	PGA2	P53903	129 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms