RNA–Protein interactions for RNA: YBL056W

PTC3, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC3, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC3YBL056W TIF11P38912 153 aaKnown RBP6.89□□□□□ -1.31
PTC3YBL056W YFL040WP43562 540 aa6.89□□□□□ -1.31
PTC3YBL056W SCD6P45978 349 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31 RIP-Chip
PTC3YBL056W YLR297WQ05899 129 aa6.89□□□□□ -1.31
PTC3YBL056W SHS1Q07657 551 aa6.89□□□□□ -1.31
PTC3YBL056W PCD1Q12524 340 aa6.89□□□□□ -1.31
PTC3YBL056W ADE4P04046 510 aaKnown RBP6.88□□□□□ -1.31
PTC3YBL056W SWI6P09959 803 aa6.88□□□□□ -1.31
PTC3YBL056W RPL4AP10664 362 aaKnown RBP6.88□□□□□ -1.31
PTC3YBL056W MAC1P35192 417 aa6.88□□□□□ -1.31
PTC3YBL056W YKL023WP36103 277 aaKnown RBP6.88□□□□□ -1.31
PTC3YBL056W POA1P38218 177 aa6.88□□□□□ -1.31
PTC3YBL056W ULI1P43604 169 aa6.88□□□□□ -1.31
PTC3YBL056W GCV2P49095 1034 aa6.88□□□□□ -1.31
PTC3YBL056W RPL4BP49626 362 aaKnown RBP6.88□□□□□ -1.31
PTC3YBL056W YGR035CP53222 116 aa6.88□□□□□ -1.31
PTC3YBL056W SLX4Q12098 748 aa6.88□□□□□ -1.31
PTC3YBL056W YBL029C-AQ3E756 94 aa6.88□□□□□ -1.31
PTC3YBL056W RIF1P29539 1916 aa6.88□□□□□ -1.31
PTC3YBL056W WHI3P34761 661 aaKnown RBP6.87□□□□□ -1.31
PTC3YBL056W KIC1P38692 1080 aa6.87□□□□□ -1.31
PTC3YBL056W VFA1P40080 203 aa6.87□□□□□ -1.31
PTC3YBL056W LAM5P43560 674 aa6.87□□□□□ -1.31
PTC3YBL056W DAS1P47005 663 aa6.87□□□□□ -1.31
PTC3YBL056W COS5P47187 383 aa6.87□□□□□ -1.31
PTC3YBL056W FOL2P51601 243 aaKnown RBP6.87□□□□□ -1.31
PTC3YBL056W YNL134CP53912 376 aaKnown RBP6.87□□□□□ -1.31
PTC3YBL056W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
PTC3YBL056W SPP1Q03012 353 aa6.87□□□□□ -1.31
PTC3YBL056W CSR1Q06705 408 aaKnown RBP6.87□□□□□ -1.31
PTC3YBL056W YDL206WQ12424 762 aa6.87□□□□□ -1.31
PTC3YBL056W TUP1P16649 713 aa6.86□□□□□ -1.31
PTC3YBL056W IME1P21190 360 aa6.86□□□□□ -1.31
PTC3YBL056W PRR1P28708 518 aa6.86□□□□□ -1.31
PTC3YBL056W BUD2P33314 1104 aa6.86□□□□□ -1.31
PTC3YBL056W YHL026CP38740 315 aa6.86□□□□□ -1.31
PTC3YBL056W FTR1P40088 404 aa6.86□□□□□ -1.31
PTC3YBL056W YER186CP40101 306 aa6.86□□□□□ -1.31
PTC3YBL056W SDS3P40505 327 aa6.86□□□□□ -1.31
PTC3YBL056W ISM1P48526 1002 aa6.86□□□□□ -1.31
PTC3YBL056W UME1Q03010 460 aa6.86□□□□□ -1.31
PTC3YBL056W YLR287CQ05881 355 aa6.86□□□□□ -1.31
PTC3YBL056W PLP2Q12017 286 aa6.86□□□□□ -1.31
PTC3YBL056W PPR1P07272 904 aaPredicted RBP6.85□□□□□ -1.31
PTC3YBL056W ASP3-2P0CX77 362 aa6.85□□□□□ -1.31
PTC3YBL056W ASP3-3P0CX78 362 aa6.85□□□□□ -1.31
PTC3YBL056W ASP3-4P0CX79 362 aa6.85□□□□□ -1.31
PTC3YBL056W ASP3-1P0CZ17 362 aa6.85□□□□□ -1.31
PTC3YBL056W NAT1P12945 854 aaKnown RBP6.85□□□□□ -1.31
PTC3YBL056W CDC42P19073 191 aa6.85□□□□□ -1.31
PTC3YBL056W CAD1P24813 409 aaKnown RBP6.85□□□□□ -1.31
PTC3YBL056W SCJ1P25303 377 aa6.85□□□□□ -1.31
PTC3YBL056W CDC11P32458 415 aa6.85□□□□□ -1.31
PTC3YBL056W SWI3P32591 825 aa6.85□□□□□ -1.31
PTC3YBL056W XRS2P33301 854 aa6.85□□□□□ -1.31
PTC3YBL056W TRM2P33753 639 aa6.85□□□□□ -1.31
PTC3YBL056W PTC4P38089 393 aa6.85□□□□□ -1.31
PTC3YBL056W SPO74P45819 413 aa6.85□□□□□ -1.31
PTC3YBL056W CLA4P48562 842 aa6.85□□□□□ -1.31
PTC3YBL056W TAD1P53065 400 aa6.85□□□□□ -1.31
PTC3YBL056W ALG11P53954 548 aaKnown RBP6.85□□□□□ -1.31
PTC3YBL056W RPA49Q01080 415 aaPredicted RBP6.85□□□□□ -1.31
PTC3YBL056W TBF1Q02457 562 aa6.85□□□□□ -1.31
PTC3YBL056W RGA2Q06407 1009 aa6.85□□□□□ -1.31
PTC3YBL056W MAG2Q06436 670 aaKnown RBP6.85□□□□□ -1.31
PTC3YBL056W IWR1Q07532 353 aaPredicted RBP6.85□□□□□ -1.31
PTC3YBL056W APL4Q12028 832 aa6.85□□□□□ -1.31
PTC3YBL056W HMI1Q12039 706 aa6.85□□□□□ -1.31
PTC3YBL056W SGT2Q12118 346 aaKnown RBP6.85□□□□□ -1.31
PTC3YBL056W ATG9Q12142 997 aa6.85□□□□□ -1.31
PTC3YBL056W RRP6Q12149 733 aaKnown RBP6.85□□□□□ -1.31
PTC3YBL056W GIS3Q12418 502 aa6.85□□□□□ -1.31
PTC3YBL056W AI4P03878 556 aa6.84□□□□□ -1.31
PTC3YBL056W TIF1P10081 395 aaKnown RBP6.84□□□□□ -1.31
PTC3YBL056W SPO12P17123 173 aa6.84□□□□□ -1.31
PTC3YBL056W KIP1P28742 1111 aa6.84□□□□□ -1.31
PTC3YBL056W RAD54P32863 898 aa6.84□□□□□ -1.31
PTC3YBL056W EBP2P36049 427 aaKnown RBP6.84□□□□□ -1.31
PTC3YBL056W CPR7P47103 393 aa6.84□□□□□ -1.31
PTC3YBL056W PPM1Q04081 328 aa6.84□□□□□ -1.31
PTC3YBL056W YPR078CQ06813 372 aa6.84□□□□□ -1.31
PTC3YBL056W YOR022CQ12204 715 aa6.84□□□□□ -1.31
PTC3YBL056W HIP1P06775 603 aa6.84□□□□□ -1.32
PTC3YBL056W CYC8P14922 966 aa6.84□□□□□ -1.32
PTC3YBL056W SMC1P32908 1225 aa6.84□□□□□ -1.32
PTC3YBL056W NIP100P33420 868 aa6.84□□□□□ -1.32
PTC3YBL056W UBP14P38237 781 aaKnown RBP6.84□□□□□ -1.32
PTC3YBL056W SLX1P38324 304 aa6.84□□□□□ -1.32
PTC3YBL056W YHR054CP38780 354 aa6.84□□□□□ -1.32
PTC3YBL056W IES1P43579 692 aa6.84□□□□□ -1.32
PTC3YBL056W ALT2P52892 507 aa6.84□□□□□ -1.32
PTC3YBL056W ESBP6P53918 673 aa6.84□□□□□ -1.32
PTC3YBL056W CEF1Q03654 590 aaPredicted RBP6.84□□□□□ -1.32
PTC3YBL056W SNU56Q03782 492 aaKnown RBP6.84□□□□□ -1.32
PTC3YBL056W PUS1Q12211 544 aaKnown RBP6.84□□□□□ -1.32
PTC3YBL056W OSH2Q12451 1283 aa6.84□□□□□ -1.32
PTC3YBL056W RSA4P25382 515 aaKnown RBP6.83□□□□□ -1.32
PTC3YBL056W PDC6P26263 563 aaKnown RBP6.83□□□□□ -1.32
PTC3YBL056W CSE2P33308 149 aa6.83□□□□□ -1.32
PTC3YBL056W YEL023CP39992 682 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms