RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS17	YOR132W	RFA1	P22336	621 aa	Known RBP	4.58	□□□□□ -1.68
VPS17	YOR132W	ERT1	P38140	529 aa		4.58	□□□□□ -1.68
VPS17	YOR132W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
VPS17	YOR132W	CHA4	P43634	648 aa		4.58	□□□□□ -1.68
VPS17	YOR132W	DNA2	P38859	1522 aa		4.58	□□□□□ -1.68
VPS17	YOR132W	TOP3	P13099	656 aa		4.57	□□□□□ -1.68
VPS17	YOR132W	STE11	P23561	717 aa		4.57	□□□□□ -1.68
VPS17	YOR132W	YKL091C	P33324	310 aa	Known RBP	4.57	□□□□□ -1.68
VPS17	YOR132W	BRN1	P38170	754 aa		4.57	□□□□□ -1.68
VPS17	YOR132W	UBP6	P43593	499 aa	Known RBP	4.57	□□□□□ -1.68
VPS17	YOR132W	STE13	P33894	931 aa		4.57	□□□□□ -1.68
VPS17	YOR132W	LST4	P34239	828 aa		4.57	□□□□□ -1.68
VPS17	YOR132W	CHZ1	P40019	153 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS17	YOR132W	URN1	Q06525	465 aa	Known RBP	4.57	□□□□□ -1.68
VPS17	YOR132W	MYO2	P19524	1574 aa	Known RBP	4.57	□□□□□ -1.68
VPS17	YOR132W	ATG2	P53855	1592 aa		4.56	□□□□□ -1.68
VPS17	YOR132W	TOM70	P07213	617 aa	Known RBP	4.56	□□□□□ -1.68
VPS17	YOR132W	YCR015C	P25616	317 aa		4.56	□□□□□ -1.68
VPS17	YOR132W	YKL222C	P35995	705 aa		4.56	□□□□□ -1.68
VPS17	YOR132W	PLB1	P39105	664 aa		4.56	□□□□□ -1.68
VPS17	YOR132W	GIP4	P39732	760 aa		4.56	□□□□□ -1.68
VPS17	YOR132W	URM1	P40554	99 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS17	YOR132W	TAF1	P46677	1066 aa		4.56	□□□□□ -1.68
VPS17	YOR132W	MNN10	P50108	393 aa	Known RBP	4.56	□□□□□ -1.68
VPS17	YOR132W	RPN4	Q03465	531 aa		4.56	□□□□□ -1.68
VPS17	YOR132W	TMA10	Q06177	86 aa		4.56	□□□□□ -1.68
VPS17	YOR132W	POL1	P13382	1468 aa		4.55	□□□□□ -1.68
VPS17	YOR132W	SPC42	P36094	363 aa		4.55	□□□□□ -1.68
VPS17	YOR132W	BET3	P36149	193 aa		4.55	□□□□□ -1.68
VPS17	YOR132W	NIT3	P49954	291 aa		4.55	□□□□□ -1.68
VPS17	YOR132W	MCM6	P53091	1017 aa	Known RBP	4.55	□□□□□ -1.68
VPS17	YOR132W	MPH2	P0CD99	609 aa		4.54	□□□□□ -1.68
VPS17	YOR132W	SHM2	P37291	469 aa	Known RBP	4.54	□□□□□ -1.68
VPS17	YOR132W	WHI4	Q07655	649 aa	Known RBP	4.54	□□□□□ -1.68
VPS17	YOR132W	ENV7	Q12003	364 aa		4.54	□□□□□ -1.68
VPS17	YOR132W	STU1	P38198	1513 aa		4.54	□□□□□ -1.68
VPS17	YOR132W	BUD4	P47136	1447 aa		4.54	□□□□□ -1.68
VPS17	YOR132W	CEP3	P40969	608 aa		4.54	□□□□□ -1.68
VPS17	YOR132W	RTA1	P53047	317 aa		4.54	□□□□□ -1.68
VPS17	YOR132W	ECM5	Q03214	1411 aa		4.54	□□□□□ -1.68
VPS17	YOR132W	KOG1	P38873	1557 aa		4.54	□□□□□ -1.68
VPS17	YOR132W	RPS9A	O13516	197 aa	Known RBP	4.53	□□□□□ -1.68
VPS17	YOR132W	SED4	P25365	1065 aa		4.53	□□□□□ -1.68
VPS17	YOR132W	URA1	P28272	314 aa	Predicted RBP	4.53	□□□□□ -1.68
VPS17	YOR132W	CTS1	P29029	562 aa		4.53	□□□□□ -1.68
VPS17	YOR132W	TYE7	P33122	291 aa	Predicted RBP	4.53	□□□□□ -1.68
VPS17	YOR132W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
VPS17	YOR132W	NCS6	P53088	359 aa		4.53	□□□□□ -1.68
VPS17	YOR132W	DAM1	P53267	343 aa		4.53	□□□□□ -1.68
VPS17	YOR132W	DOS2	P54858	310 aa		4.53	□□□□□ -1.68
VPS17	YOR132W	SSL1	Q04673	461 aa	Predicted RBP	4.53	□□□□□ -1.68
VPS17	YOR132W	PPM2	Q08282	695 aa		4.53	□□□□□ -1.68
VPS17	YOR132W	UPC2	Q12151	913 aa		4.53	□□□□□ -1.68
VPS17	YOR132W	YPK9	Q12697	1472 aa		4.53	□□□□□ -1.68
VPS17	YOR132W	RPD3	P32561	433 aa		4.52	□□□□□ -1.69
VPS17	YOR132W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
VPS17	YOR132W	YIL108W	P40483	696 aa	Known RBP	4.52	□□□□□ -1.69
VPS17	YOR132W	ALG2	P43636	503 aa		4.52	□□□□□ -1.69
VPS17	YOR132W	ATG36	P46983	293 aa		4.52	□□□□□ -1.69
VPS17	YOR132W	YGR283C	P53336	341 aa	Predicted RBP	4.52	□□□□□ -1.69
VPS17	YOR132W	HDA1	P53973	706 aa		4.52	□□□□□ -1.69
VPS17	YOR132W	YKR011C	Q02209	353 aa		4.52	□□□□□ -1.69
VPS17	YOR132W	NPC2	Q12408	173 aa		4.52	□□□□□ -1.69
VPS17	YOR132W	KCS1	Q12494	1050 aa		4.52	□□□□□ -1.69
VPS17	YOR132W	BPT1	P14772	1559 aa		4.52	□□□□□ -1.69
VPS17	YOR132W	EMC3	P36039	253 aa		4.51	□□□□□ -1.69
VPS17	YOR132W	BUD6	P41697	788 aa		4.51	□□□□□ -1.69
VPS17	YOR132W	OSW7	P43611	510 aa		4.51	□□□□□ -1.69
VPS17	YOR132W	NOG2	P53742	486 aa	Known RBP	4.51	□□□□□ -1.69
VPS17	YOR132W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
VPS17	YOR132W	FBP1	P09201	348 aa		4.51	□□□□□ -1.69
VPS17	YOR132W	EXG2	P52911	562 aa		4.51	□□□□□ -1.69
VPS17	YOR132W	GUP2	Q08929	609 aa		4.51	□□□□□ -1.69
VPS17	YOR132W	PEP1	P32319	1579 aa		4.5	□□□□□ -1.69
VPS17	YOR132W	HCM1	P25364	564 aa		4.5	□□□□□ -1.69
VPS17	YOR132W	CYS3	P31373	394 aa	Known RBP	4.5	□□□□□ -1.69
VPS17	YOR132W	DCG1	P32460	244 aa		4.5	□□□□□ -1.69
VPS17	YOR132W	STE14	P32584	239 aa		4.5	□□□□□ -1.69
VPS17	YOR132W	GYP8	P43570	497 aa		4.5	□□□□□ -1.69
VPS17	YOR132W	PUS2	P53167	370 aa		4.5	□□□□□ -1.69
VPS17	YOR132W	YDR514C	Q04408	483 aa		4.5	□□□□□ -1.69
VPS17	YOR132W	PMA1	P05030	918 aa	Known RBP	4.49	□□□□□ -1.69
VPS17	YOR132W	ERR1	P0CX10	437 aa		4.49	□□□□□ -1.69
VPS17	YOR132W	ERR2	P0CX11	437 aa		4.49	□□□□□ -1.69
VPS17	YOR132W	DAL7	P21826	554 aa		4.49	□□□□□ -1.69
VPS17	YOR132W	TIM23	P32897	222 aa		4.49	□□□□□ -1.69
VPS17	YOR132W	GDH3	P39708	457 aa		4.49	□□□□□ -1.69
VPS17	YOR132W	NUP82	P40368	713 aa		4.49	□□□□□ -1.69
VPS17	YOR132W	SDP1	P40479	209 aa		4.49	□□□□□ -1.69
VPS17	YOR132W	FPR4	Q06205	392 aa	Predicted RBP	4.49	□□□□□ -1.69
VPS17	YOR132W	REH1	Q06709	432 aa		4.49	□□□□□ -1.69
VPS17	YOR132W	SCC2	Q04002	1493 aa		4.49	□□□□□ -1.69
VPS17	YOR132W	HSV2	P50079	448 aa	Predicted RBP	4.48	□□□□□ -1.69
VPS17	YOR132W	ENB1	Q08299	606 aa		4.48	□□□□□ -1.69
VPS17	YOR132W	YLR125W	Q12138	136 aa		4.48	□□□□□ -1.69
VPS17	YOR132W	PFK1	P16861	987 aa	Known RBP	4.48	□□□□□ -1.69
VPS17	YOR132W	RAD53	P22216	821 aa		4.48	□□□□□ -1.69
VPS17	YOR132W	KAR4	P25583	335 aa		4.48	□□□□□ -1.69
VPS17	YOR132W	SPC29	P33419	253 aa		4.48	□□□□□ -1.69
VPS17	YOR132W	TRM2	P33753	639 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 134.8 ms