RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROD1	YOR018W	RRD1	P40454	393 aa	Known RBP	4.24	□□□□□ -1.73
ROD1	YOR018W	TOS3	P43637	560 aa		4.24	□□□□□ -1.73
ROD1	YOR018W	TAD1	P53065	400 aa		4.24	□□□□□ -1.73
ROD1	YOR018W	MFM1	Q02783	413 aa		4.24	□□□□□ -1.73
ROD1	YOR018W	UTP13	Q05946	817 aa	Known RBP	4.24	□□□□□ -1.73
ROD1	YOR018W	CDC37	P06101	506 aa	Known RBP	4.23	□□□□□ -1.73
ROD1	YOR018W	SDH2	P21801	266 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	MSH3	P25336	1018 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	PER1	P25625	357 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	ASF1	P32447	279 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	PAM1	P37304	830 aa	Known RBP	4.23	□□□□□ -1.73
ROD1	YOR018W	ADE17	P38009	592 aa	Known RBP	4.23	□□□□□ -1.73
ROD1	YOR018W	PES4	P39684	611 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	BOL3	P39724	118 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	MDJ2	P42834	146 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	VTC2	P43585	828 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	STE20	Q03497	939 aa	Known RBP	4.23	□□□□□ -1.73
ROD1	YOR018W	SVF1	Q05515	481 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	ISA1	Q07821	250 aa	Predicted RBP	4.23	□□□□□ -1.73
ROD1	YOR018W	ALR1	Q08269	859 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	FOB1	O13329	566 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	PHO87	P25360	923 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	SRO9	P25567	434 aa	Known RBP	4.23	□□□□□ -1.73
ROD1	YOR018W	HUL4	P40985	892 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	OSW7	P43611	510 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	RTC4	P53850	401 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	YAP7	Q08182	245 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	YEL077C	Q3E7X8	1277 aa		4.23	□□□□□ -1.73
ROD1	YOR018W	DED1	P06634	604 aa	Known RBP	4.22	□□□□□ -1.73
ROD1	YOR018W	GUT2	P32191	649 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	YKL023W	P36103	277 aa	Known RBP	4.22	□□□□□ -1.73
ROD1	YOR018W	BSD2	P38356	321 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	SOH1	P38633	127 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	KSP1	P38691	1029 aa	Known RBP	4.22	□□□□□ -1.73
ROD1	YOR018W	GPB2	P39717	880 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	AFG3	P39925	761 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	SPR3	P41901	512 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	ATG1	P53104	897 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	YGR125W	P53273	1036 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	DUS1	P53759	423 aa	Known RBP	4.22	□□□□□ -1.73
ROD1	YOR018W	FUS2	Q05670	677 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	GUD1	Q07729	489 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	SPO75	Q07798	868 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	MSC6	Q08818	692 aa	Known RBP	4.22	□□□□□ -1.73
ROD1	YOR018W	YBL113C	Q7M4S9	792 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	SRD1	P09007	221 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	CDC11	P32458	415 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	BCS1	P32839	456 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	PGM1	P33401	570 aa	Known RBP	4.22	□□□□□ -1.73
ROD1	YOR018W	KTR2	P33550	425 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	SPT23	P35210	1082 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	RPN3	P40016	523 aa	Known RBP	4.22	□□□□□ -1.73
ROD1	YOR018W	FIS1	P40515	155 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	HFM1	P51979	1187 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	CTR9	P89105	1077 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	GFD1	Q04839	188 aa	Known RBP	4.22	□□□□□ -1.73
ROD1	YOR018W	HCR1	Q05775	265 aa	Known RBP	4.22	□□□□□ -1.73
ROD1	YOR018W	NOC3	Q07896	663 aa	Predicted RBP	4.22	□□□□□ -1.73
ROD1	YOR018W	WHI5	Q12416	295 aa		4.22	□□□□□ -1.73
ROD1	YOR018W	PGK1	P00560	416 aa	Known RBP	4.21	□□□□□ -1.74
ROD1	YOR018W	MIP6	P38760	659 aa	Known RBP	4.21	□□□□□ -1.74
ROD1	YOR018W	INP51	P40559	946 aa	Known RBP	4.21	□□□□□ -1.74
ROD1	YOR018W	LCB2	P40970	561 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	ACF4	P47129	309 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	UME1	Q03010	460 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	PHM6	Q05637	104 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	YLR225C	Q05948	407 aa	Known RBP	4.21	□□□□□ -1.74
ROD1	YOR018W	ETT1	Q08421	412 aa	Known RBP	4.21	□□□□□ -1.74
ROD1	YOR018W	MAS2	P11914	482 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	TUP1	P16649	713 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	IME1	P21190	360 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	KIN82	P25341	720 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	RRN6	P32786	894 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	EBP2	P36049	427 aa	Known RBP	4.21	□□□□□ -1.74
ROD1	YOR018W	TFG1	P41895	735 aa	Predicted RBP	4.21	□□□□□ -1.74
ROD1	YOR018W	TAM41	P53230	385 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	YLR001C	Q07895	862 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	SLX4	Q12098	748 aa		4.21	□□□□□ -1.74
ROD1	YOR018W	CDC19	P00549	500 aa	Known RBP	4.2	□□□□□ -1.74
ROD1	YOR018W	OM45	P16547	393 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	CKA2	P19454	339 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
ROD1	YOR018W	TFC4	P33339	1025 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	PXL1	P36166	706 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	VPS53	P47061	822 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	ENV11	P53246	860 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	NCS2	P53923	493 aa	Predicted RBP	4.2	□□□□□ -1.74
ROD1	YOR018W	ELP4	Q02884	456 aa	Known RBP	4.2	□□□□□ -1.74
ROD1	YOR018W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
ROD1	YOR018W	TRM11	Q12463	433 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	ZPS1	Q12512	249 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	TIF6	Q12522	245 aa	Known RBP	4.2	□□□□□ -1.74
ROD1	YOR018W	TSC13	Q99190	310 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	TAO3	P40468	2376 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	SPO12	P17123	173 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	HEM3	P28789	327 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	NAM7	P30771	971 aa	Known RBP	4.2	□□□□□ -1.74
ROD1	YOR018W	XRS2	P33301	854 aa		4.2	□□□□□ -1.74
ROD1	YOR018W	MPE1	P35728	441 aa	Known RBP	4.2	□□□□□ -1.74
ROD1	YOR018W	BCD1	P38772	366 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms