RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS9	YML097C	SNP1	Q00916	300 aa	Predicted RBP	4.11	□□□□□ -1.75
VPS9	YML097C	ATP25	Q03153	612 aa		4.11	□□□□□ -1.75
VPS9	YML097C	EAR1	Q03212	550 aa		4.11	□□□□□ -1.75
VPS9	YML097C	ATG16	Q03818	150 aa		4.11	□□□□□ -1.75
VPS9	YML097C	ATG33	Q06485	197 aa		4.11	□□□□□ -1.75
VPS9	YML097C	GUP2	Q08929	609 aa		4.11	□□□□□ -1.75
VPS9	YML097C	ATP4	P05626	244 aa		4.1	□□□□□ -1.75
VPS9	YML097C	MPH2	P0CD99	609 aa		4.1	□□□□□ -1.75
VPS9	YML097C	DAL7	P21826	554 aa		4.1	□□□□□ -1.75
VPS9	YML097C	AEP2	P22136	580 aa		4.1	□□□□□ -1.75
VPS9	YML097C	SAP190	P36123	1033 aa		4.1	□□□□□ -1.75
VPS9	YML097C	GIC1	P38785	314 aa		4.1	□□□□□ -1.75
VPS9	YML097C	AKR1	P39010	764 aa		4.1	□□□□□ -1.75
VPS9	YML097C	OAF1	P39720	1047 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS9	YML097C	NPP2	P39997	493 aa		4.1	□□□□□ -1.75
VPS9	YML097C	GYP7	P48365	746 aa		4.1	□□□□□ -1.75
VPS9	YML097C	UBC9	P50623	157 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS9	YML097C	TAD1	P53065	400 aa		4.1	□□□□□ -1.75
VPS9	YML097C	BRE4	Q07660	1125 aa		4.1	□□□□□ -1.75
VPS9	YML097C	RCL1	Q08096	367 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS9	YML097C	RSB1	Q08417	382 aa		4.1	□□□□□ -1.75
VPS9	YML097C	TY1A-NL1	Q12391	440 aa	Known RBP	4.1	□□□□□ -1.75
VPS9	YML097C	SNF5	P18480	905 aa		4.09	□□□□□ -1.75
VPS9	YML097C	CCZ1	P38273	704 aa		4.09	□□□□□ -1.75
VPS9	YML097C	TDA3	P38758	523 aa		4.09	□□□□□ -1.75
VPS9	YML097C	SHR5	P41912	237 aa		4.09	□□□□□ -1.75
VPS9	YML097C	CTH1	P47976	325 aa		4.09	□□□□□ -1.75
VPS9	YML097C	CEF1	Q03654	590 aa	Predicted RBP	4.09	□□□□□ -1.75
VPS9	YML097C	NHX1	Q04121	633 aa		4.09	□□□□□ -1.75
VPS9	YML097C	CRR1	Q05790	422 aa		4.09	□□□□□ -1.75
VPS9	YML097C	REH1	Q06709	432 aa		4.09	□□□□□ -1.75
VPS9	YML097C	YDL121C	Q07541	149 aa		4.09	□□□□□ -1.75
VPS9	YML097C	RMP1	Q12530	201 aa		4.09	□□□□□ -1.75
VPS9	YML097C	RPS9A	O13516	197 aa	Known RBP	4.08	□□□□□ -1.76
VPS9	YML097C	CHS2	P14180	963 aa		4.08	□□□□□ -1.76
VPS9	YML097C	YCL002C	P25565	263 aa		4.08	□□□□□ -1.76
VPS9	YML097C	NAM7	P30771	971 aa	Known RBP	4.08	□□□□□ -1.76
VPS9	YML097C	YKR078W	P36158	585 aa	Known RBP	4.08	□□□□□ -1.76
VPS9	YML097C	YHL012W	P38709	493 aa		4.08	□□□□□ -1.76
VPS9	YML097C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
VPS9	YML097C	CEP3	P40969	608 aa		4.08	□□□□□ -1.76
VPS9	YML097C	GZF3	P42944	551 aa	Known RBP	4.08	□□□□□ -1.76
VPS9	YML097C	ALT1	P52893	592 aa		4.08	□□□□□ -1.76
VPS9	YML097C	SRT1	Q03175	343 aa		4.08	□□□□□ -1.76
VPS9	YML097C	LRS4	Q04087	347 aa	Known RBP	4.08	□□□□□ -1.76
VPS9	YML097C	YDR338C	Q05497	695 aa		4.08	□□□□□ -1.76
VPS9	YML097C	OSW2	Q12202	724 aa		4.08	□□□□□ -1.76
VPS9	YML097C	DIF1	O13577	133 aa		4.07	□□□□□ -1.76
VPS9	YML097C	PIF1	P07271	859 aa		4.07	□□□□□ -1.76
VPS9	YML097C	ENA1	P13587	1091 aa		4.07	□□□□□ -1.76
VPS9	YML097C	RNQ1	P25367	405 aa		4.07	□□□□□ -1.76
VPS9	YML097C	FUN30	P31380	1131 aa		4.07	□□□□□ -1.76
VPS9	YML097C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
VPS9	YML097C	NIC96	P34077	839 aa		4.07	□□□□□ -1.76
VPS9	YML097C	DUG1	P43616	481 aa	Known RBP	4.07	□□□□□ -1.76
VPS9	YML097C	SDH1	Q00711	640 aa		4.07	□□□□□ -1.76
VPS9	YML097C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
VPS9	YML097C	ENA2	Q01896	1091 aa		4.07	□□□□□ -1.76
VPS9	YML097C	MET14	Q02196	202 aa		4.07	□□□□□ -1.76
VPS9	YML097C	COG8	Q04632	607 aa		4.07	□□□□□ -1.76
VPS9	YML097C	PHM6	Q05637	104 aa		4.07	□□□□□ -1.76
VPS9	YML097C	YLL058W	Q12198	575 aa		4.07	□□□□□ -1.76
VPS9	YML097C	ENA5	Q12691	1091 aa		4.07	□□□□□ -1.76
VPS9	YML097C	PGI1	P12709	554 aa	Known RBP	4.06	□□□□□ -1.76
VPS9	YML097C	RSC6	P25632	483 aa		4.06	□□□□□ -1.76
VPS9	YML097C	URA1	P28272	314 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS9	YML097C	HSP78	P33416	811 aa		4.06	□□□□□ -1.76
VPS9	YML097C	WHI3	P34761	661 aa	Known RBP	4.06	□□□□□ -1.76
VPS9	YML097C	HSL7	P38274	827 aa		4.06	□□□□□ -1.76
VPS9	YML097C	PIK1	P39104	1066 aa		4.06	□□□□□ -1.76
VPS9	YML097C	RLP7	P40693	322 aa	Known RBP	4.06	□□□□□ -1.76
VPS9	YML097C	MNN11	P46985	422 aa	Known RBP	4.06	□□□□□ -1.76
VPS9	YML097C	NIT2	P47016	307 aa		4.06	□□□□□ -1.76
VPS9	YML097C	PIP2	P52960	996 aa		4.06	□□□□□ -1.76
VPS9	YML097C	MTC3	P53077	123 aa		4.06	□□□□□ -1.76
VPS9	YML097C	NPY1	P53164	384 aa		4.06	□□□□□ -1.76
VPS9	YML097C	NOG2	P53742	486 aa	Known RBP	4.06	□□□□□ -1.76
VPS9	YML097C	NBA1	Q08229	501 aa	Known RBP	4.06	□□□□□ -1.76
VPS9	YML097C	SVS1	Q12254	260 aa		4.06	□□□□□ -1.76
VPS9	YML097C	PRC1	P00729	532 aa		4.05	□□□□□ -1.76
VPS9	YML097C	GAL1	P04385	528 aa		4.05	□□□□□ -1.76
VPS9	YML097C	NOT3	P06102	836 aa	Known RBP	4.05	□□□□□ -1.76
VPS9	YML097C	DPB3	P27344	201 aa		4.05	□□□□□ -1.76
VPS9	YML097C	CYS3	P31373	394 aa	Known RBP	4.05	□□□□□ -1.76
VPS9	YML097C	SFA1	P32771	386 aa		4.05	□□□□□ -1.76
VPS9	YML097C	YKL222C	P35995	705 aa		4.05	□□□□□ -1.76
VPS9	YML097C	BIT2	P38346	545 aa		4.05	□□□□□ -1.76
VPS9	YML097C	GPP2	P40106	250 aa	Known RBP	4.05	□□□□□ -1.76
VPS9	YML097C	YFL052W	P43551	465 aa		4.05	□□□□□ -1.76
VPS9	YML097C	RET2	P43621	546 aa		4.05	□□□□□ -1.76
VPS9	YML097C	HFM1	P51979	1187 aa		4.05	□□□□□ -1.76
VPS9	YML097C	TAN1	P53072	289 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS9	YML097C	SPC105	P53148	917 aa		4.05	□□□□□ -1.76
VPS9	YML097C	PUS2	P53167	370 aa		4.05	□□□□□ -1.76
VPS9	YML097C	YGR021W	P53212	290 aa		4.05	□□□□□ -1.76
VPS9	YML097C	UBX4	P54730	416 aa		4.05	□□□□□ -1.76
VPS9	YML097C	YHM2	Q04013	314 aa		4.05	□□□□□ -1.76
VPS9	YML097C	YPR027C	Q12079	277 aa		4.05	□□□□□ -1.76
VPS9	YML097C	CYC7	P00045	113 aa		4.04	□□□□□ -1.76
VPS9	YML097C	HCA4	P20448	770 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms