RNA–Protein interactions for RNA: YLR228C

ECM22, Transcript of Sterol regulatory element binding protein, yeast

Gene ECM22, Length 2,445 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM22	YLR228C	POB3	Q04636	552 aa	Known RBP	4.26	□□□□□ -1.73
ECM22	YLR228C	PIG1	Q06216	648 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	ATG17	Q06410	417 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	MCP2	Q06567	569 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	DCS2	Q12123	353 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	SEM1	O94742	89 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	APL1	P27351	700 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	UTP11	P34247	250 aa	Predicted RBP	4.26	□□□□□ -1.73
ECM22	YLR228C	ECM21	P38167	1117 aa	Known RBP	4.26	□□□□□ -1.73
ECM22	YLR228C	RFT1	P38206	574 aa	Predicted RBP	4.26	□□□□□ -1.73
ECM22	YLR228C	SOL3	P38858	249 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	YGL176C	P46945	554 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	HOP2	P53187	214 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	MMT1	Q03218	510 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	UTP5	Q04177	643 aa	Known RBP	4.26	□□□□□ -1.73
ECM22	YLR228C	HMI1	Q12039	706 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	YLR125W	Q12138	136 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	RUP1	Q12242	671 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	BBP1	Q12365	385 aa		4.26	□□□□□ -1.73
ECM22	YLR228C	HXK1	P04806	485 aa	Known RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	SNA3	P14359	133 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	SPO12	P17123	173 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	YET1	P35723	206 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	OCT1	P35999	772 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	AKL1	P38080	1108 aa	Known RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	PEX18	P38855	283 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	MAM1	P40065	302 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	NOP9	P47077	666 aa	Known RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	YKE2	P52553	114 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	MDR1	P53258	950 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	FAR11	P53917	953 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	PTA1	Q01329	785 aa	Predicted RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	COA4	Q05809	96 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	SSQ1	Q05931	657 aa	Predicted RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	YDL073W	Q07454	984 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	BRE1	Q07457	700 aa	Known RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	SCM3	Q12334	223 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	PET494	P07390	489 aa	Predicted RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	STE6	P12866	1290 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	GCN3	P14741	305 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	SEN2	P16658	377 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	CLB2	P24869	491 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	YCR016W	P25617	290 aa	Known RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	MSH2	P25847	964 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	MLS1	P30952	554 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	EFT1	P32324	842 aa	Known RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	GRX4	P32642	244 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	GYP6	P32806	458 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	JNM1	P36224	373 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	YHR020W	P38708	688 aa	Known RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	PCF11	P39081	626 aa	Predicted RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	TDA10	P42938	290 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	HOS2	P53096	452 aa	Predicted RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	NMA111	P53920	997 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	SLU7	Q02775	382 aa	Known RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	USA1	Q03714	838 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	VTI1	Q04338	217 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	CAB1	Q04430	367 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	YMR114C	Q04471	368 aa	Known RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	SOV1	Q04748	898 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	ARP9	Q05123	467 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	YOL057W	Q08225	711 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	RPN8	Q08723	338 aa	Known RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	UIP4	Q08926	304 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	NUP192	P47054	1683 aa		4.25	□□□□□ -1.73
ECM22	YLR228C	DUR1,2	P32528	1835 aa	Known RBP	4.25	□□□□□ -1.73
ECM22	YLR228C	PGI1	P12709	554 aa	Known RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	RAD4	P14736	754 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	TEC1	P18412	486 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	KGD2	P19262	463 aa	Predicted RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	CKI1	P20485	582 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	MSB1	P21339	1137 aa	Known RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	BUD23	P25627	275 aa	Predicted RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	YCR051W	P25631	222 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	NIP1	P32497	812 aa	Known RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	PEP7	P32609	515 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	SLA2	P33338	968 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	RTS1	P38903	757 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	IRR1	P40541	1150 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	GCD10	P41814	478 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	COS6	P53344	381 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	LSC1	P53598	329 aa	Known RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	NAF1	P53919	492 aa	Known RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	RPM2	Q02773	1202 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	URH1	Q04179	340 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	YPR172W	Q06608	200 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
ECM22	YLR228C	PYC1	P11154	1178 aa	Known RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	SEC63	P14906	663 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	UBA1	P22515	1024 aa	Known RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	CNA1	P23287	553 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	YJU2	P28320	278 aa	Predicted RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	HCS1	P34243	683 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	PIK1	P39104	1066 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	YHB1	P39676	399 aa	Known RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	REF2	P42073	533 aa	Predicted RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	RFX1	P48743	811 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	LGE1	Q02796	332 aa	Known RBP	4.24	□□□□□ -1.73
ECM22	YLR228C	UME1	Q03010	460 aa		4.24	□□□□□ -1.73
ECM22	YLR228C	DML1	Q03652	475 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms