RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W GYP8P43570 497 aa1.84□□□□□ -2.11
SLX4YLR135W PMT3P47190 753 aa1.84□□□□□ -2.11
SLX4YLR135W UBA2P52488 636 aa1.84□□□□□ -2.11
SLX4YLR135W ENV11P53246 860 aa1.84□□□□□ -2.11
SLX4YLR135W DAM1P53267 343 aa1.84□□□□□ -2.11
SLX4YLR135W SLI1P53304 468 aa1.84□□□□□ -2.11
SLX4YLR135W YGR283CP53336 341 aaPredicted RBP1.84□□□□□ -2.11
SLX4YLR135W YNL193WP53870 558 aa1.84□□□□□ -2.11
SLX4YLR135W SIZ1Q04195 904 aa1.84□□□□□ -2.11
SLX4YLR135W YAP7Q08182 245 aa1.84□□□□□ -2.11
SLX4YLR135W ENV7Q12003 364 aa1.84□□□□□ -2.11
SLX4YLR135W SRD1P09007 221 aa1.83□□□□□ -2.12
SLX4YLR135W MRC1P25588 1096 aa1.83□□□□□ -2.12
SLX4YLR135W VBA3P25594 458 aa1.83□□□□□ -2.12
SLX4YLR135W ENP1P38333 483 aaKnown RBP1.83□□□□□ -2.12
SLX4YLR135W SEC26P41810 973 aaKnown RBP1.83□□□□□ -2.12
SLX4YLR135W CAF16P43569 289 aa1.83□□□□□ -2.12
SLX4YLR135W NIT3P49954 291 aa1.83□□□□□ -2.12
SLX4YLR135W MPH2P0CD99 609 aa1.83□□□□□ -2.12
SLX4YLR135W PCL2P25693 308 aa1.83□□□□□ -2.12
SLX4YLR135W CUE2P36075 443 aaKnown RBP1.83□□□□□ -2.12
SLX4YLR135W ERT1P38140 529 aa1.83□□□□□ -2.12
SLX4YLR135W YAP1801P38856 637 aa1.83□□□□□ -2.12
SLX4YLR135W DSS1P39112 969 aa1.83□□□□□ -2.12
SLX4YLR135W TY4A-JP47023 414 aa1.83□□□□□ -2.12
SLX4YLR135W REH1Q06709 432 aa1.83□□□□□ -2.12
SLX4YLR135W RSB1Q08417 382 aa1.83□□□□□ -2.12
SLX4YLR135W AFT2Q08957 416 aa1.83□□□□□ -2.12
SLX4YLR135W SVS1Q12254 260 aa1.83□□□□□ -2.12
SLX4YLR135W RIB2Q12362 591 aaKnown RBP1.83□□□□□ -2.12
SLX4YLR135W LPX1Q12405 387 aaKnown RBP1.83□□□□□ -2.12
SLX4YLR135W CDC9P04819 755 aa1.82□□□□□ -2.12
SLX4YLR135W PHR1P05066 565 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SLX4YLR135W STO1P34160 861 aaKnown RBP1.82□□□□□ -2.12
SLX4YLR135W MCD4P36051 919 aa1.82□□□□□ -2.12
SLX4YLR135W ECM21P38167 1117 aaKnown RBP1.82□□□□□ -2.12
SLX4YLR135W YEN1P40028 759 aa1.82□□□□□ -2.12
SLX4YLR135W JSN1P47135 1091 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SLX4YLR135W HFM1P51979 1187 aa1.82□□□□□ -2.12
SLX4YLR135W SUN4P53616 420 aa1.82□□□□□ -2.12
SLX4YLR135W UME1Q03010 460 aa1.82□□□□□ -2.12
SLX4YLR135W MSC2Q03455 724 aa1.82□□□□□ -2.12
SLX4YLR135W RSC3Q06639 885 aa1.82□□□□□ -2.12
SLX4YLR135W SPS1P08458 490 aa1.82□□□□□ -2.12
SLX4YLR135W URA1P28272 314 aaPredicted RBP1.82□□□□□ -2.12
SLX4YLR135W RFC5P38251 354 aa1.82□□□□□ -2.12
SLX4YLR135W ETP1P38748 585 aaKnown RBP1.82□□□□□ -2.12
SLX4YLR135W HXT16P47185 567 aa1.82□□□□□ -2.12
SLX4YLR135W HLJ1P48353 224 aa1.82□□□□□ -2.12
SLX4YLR135W YGR237CP50089 785 aa1.82□□□□□ -2.12
SLX4YLR135W GPG1P53130 126 aa1.82□□□□□ -2.12
SLX4YLR135W SDA1P53313 767 aaKnown RBP1.82□□□□□ -2.12
SLX4YLR135W NOG2P53742 486 aaKnown RBP1.82□□□□□ -2.12
SLX4YLR135W SNP1Q00916 300 aaPredicted RBP1.82□□□□□ -2.12
SLX4YLR135W THI73Q07904 523 aa1.82□□□□□ -2.12
SLX4YLR135W MET7Q08645 548 aa1.82□□□□□ -2.12
SLX4YLR135W OSW2Q12202 724 aa1.82□□□□□ -2.12
SLX4YLR135W NUP145P49687 1317 aa1.81□□□□□ -2.12
SLX4YLR135W KIN2P13186 1147 aaKnown RBP1.81□□□□□ -2.12
SLX4YLR135W HCM1P25364 564 aa1.81□□□□□ -2.12
SLX4YLR135W HOG1P32485 435 aa1.81□□□□□ -2.12
SLX4YLR135W AIM26P32858 118 aa1.81□□□□□ -2.12
SLX4YLR135W PCM1P38628 557 aaKnown RBP1.81□□□□□ -2.12
SLX4YLR135W PTC7P38797 343 aa1.81□□□□□ -2.12
SLX4YLR135W NOP2P40991 618 aaKnown RBP1.81□□□□□ -2.12
SLX4YLR135W SFB2P53953 876 aa1.81□□□□□ -2.12
SLX4YLR135W YDR514CQ04408 483 aa1.81□□□□□ -2.12
SLX4YLR135W XYL2Q07993 356 aa1.81□□□□□ -2.12
SLX4YLR135W YDL177CQ12257 170 aa1.81□□□□□ -2.12
SLX4YLR135W SFL1P20134 766 aa1.81□□□□□ -2.12
SLX4YLR135W ATG36P46983 293 aa1.81□□□□□ -2.12
SLX4YLR135W RAI1P53063 387 aaKnown RBP1.81□□□□□ -2.12
SLX4YLR135W YPR196WQ06595 470 aa1.81□□□□□ -2.12
SLX4YLR135W CDA1Q06702 301 aa1.81□□□□□ -2.12
SLX4YLR135W YBR182C-AQ8TGU6 64 aa1.81□□□□□ -2.12
SLX4YLR135W RPP2AP05319 106 aaKnown RBP1.8□□□□□ -2.12
SLX4YLR135W NOT3P06102 836 aaKnown RBP1.8□□□□□ -2.12
SLX4YLR135W FBP1P09201 348 aa1.8□□□□□ -2.12
SLX4YLR135W RAD18P10862 487 aa1.8□□□□□ -2.12
SLX4YLR135W HSF1P10961 833 aa1.8□□□□□ -2.12
SLX4YLR135W MIH1P23748 554 aa1.8□□□□□ -2.12
SLX4YLR135W PMI40P29952 429 aaKnown RBP1.8□□□□□ -2.12
SLX4YLR135W TYE7P33122 291 aaPredicted RBP1.8□□□□□ -2.12
SLX4YLR135W STE13P33894 931 aa1.8□□□□□ -2.12
SLX4YLR135W ATG19P35193 415 aa1.8□□□□□ -2.12
SLX4YLR135W RLP7P40693 322 aaKnown RBP1.8□□□□□ -2.12
SLX4YLR135W GTS1P40956 396 aa1.8□□□□□ -2.12
SLX4YLR135W GPP1P41277 250 aaKnown RBP1.8□□□□□ -2.12
SLX4YLR135W TAD1P53065 400 aa1.8□□□□□ -2.12
SLX4YLR135W MET13P53128 600 aa1.8□□□□□ -2.12
SLX4YLR135W YGR012WP53206 393 aa1.8□□□□□ -2.12
SLX4YLR135W SEC5P89102 971 aa1.8□□□□□ -2.12
SLX4YLR135W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
SLX4YLR135W YKR011CQ02209 353 aa1.8□□□□□ -2.12
SLX4YLR135W MTQ2Q03920 221 aaPredicted RBP1.8□□□□□ -2.12
SLX4YLR135W RSM24Q03976 319 aa1.8□□□□□ -2.12
SLX4YLR135W NHX1Q04121 633 aa1.8□□□□□ -2.12
SLX4YLR135W HFD1Q04458 532 aa1.8□□□□□ -2.12
SLX4YLR135W GUP2Q08929 609 aa1.8□□□□□ -2.12
SLX4YLR135W THI21Q08975 551 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms