RNA–Protein interactions for RNA: YGL227W

VID30, Transcript of Central component of GID Complex, involved in FBPase degradation, yeastyeast

Gene VID30, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VID30YGL227W VMA4P22203 233 aaKnown RBP5.65□□□□□ -1.5
VID30YGL227W RPC53P25441 422 aa5.65□□□□□ -1.5
VID30YGL227W YSC83P32792 385 aa5.65□□□□□ -1.5
VID30YGL227W TTI1P36097 1038 aa5.65□□□□□ -1.5
VID30YGL227W POL12P38121 705 aaPredicted RBP5.65□□□□□ -1.5
VID30YGL227W AIM9P40053 627 aaKnown RBP5.65□□□□□ -1.5
VID30YGL227W BDP1P46678 594 aa5.65□□□□□ -1.5
VID30YGL227W BNI5P53890 448 aaKnown RBP5.65□□□□□ -1.5
VID30YGL227W YDL121CQ07541 149 aa5.65□□□□□ -1.5
VID30YGL227W SSB1P11484 613 aaKnown RBP5.65□□□□□ -1.51
VID30YGL227W PRO3P32263 286 aaKnown RBP5.65□□□□□ -1.51
VID30YGL227W SUL1P38359 859 aa5.65□□□□□ -1.51
VID30YGL227W YER186CP40101 306 aa5.65□□□□□ -1.51
VID30YGL227W SSB2P40150 613 aaKnown RBP5.65□□□□□ -1.51
VID30YGL227W GCR2Q01722 534 aa5.65□□□□□ -1.51
VID30YGL227W PUF4P25339 888 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
VID30YGL227W FBP26P32604 452 aa5.64□□□□□ -1.51
VID30YGL227W TSA1P34760 196 aaKnown RBP5.64□□□□□ -1.51
VID30YGL227W FUI1P38196 639 aa5.64□□□□□ -1.51
VID30YGL227W ATG12P38316 186 aa5.64□□□□□ -1.51
VID30YGL227W TY4A-JP47023 414 aa5.64□□□□□ -1.51
VID30YGL227W LAA1P39526 2014 aa5.64□□□□□ -1.51
VID30YGL227W CLN3P13365 580 aa5.64□□□□□ -1.51
VID30YGL227W YMC2P38087 329 aa5.64□□□□□ -1.51
VID30YGL227W MMS4P38257 691 aa5.64□□□□□ -1.51
VID30YGL227W BUD6P41697 788 aa5.64□□□□□ -1.51
VID30YGL227W GAL80P04387 435 aa5.63□□□□□ -1.51
VID30YGL227W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
VID30YGL227W PUP3P25451 205 aaKnown RBP5.63□□□□□ -1.51
VID30YGL227W CSM2P40465 213 aa5.63□□□□□ -1.51
VID30YGL227W MUK1Q02866 612 aa5.63□□□□□ -1.51
VID30YGL227W YPL150WQ12152 901 aa5.63□□□□□ -1.51
VID30YGL227W OSW2Q12202 724 aa5.63□□□□□ -1.51
VID30YGL227W REV1P12689 985 aa5.63□□□□□ -1.51
VID30YGL227W BMH1P29311 267 aaKnown RBP5.63□□□□□ -1.51
VID30YGL227W BCH2P36122 765 aa5.63□□□□□ -1.51
VID30YGL227W YNL108CP53929 270 aa5.63□□□□□ -1.51
VID30YGL227W PHO8P11491 566 aa5.62□□□□□ -1.51
VID30YGL227W YKE2P52553 114 aa5.62□□□□□ -1.51
VID30YGL227W GPD1Q00055 391 aaKnown RBP5.62□□□□□ -1.51
VID30YGL227W FPR4Q06205 392 aaPredicted RBP5.62□□□□□ -1.51
VID30YGL227W TIF35Q04067 274 aaKnown RBP5.62□□□□□ -1.51
VID30YGL227W PUF6Q04373 656 aaKnown RBP5.62□□□□□ -1.51
VID30YGL227W NKP2Q06162 153 aa5.62□□□□□ -1.51
VID30YGL227W YDL057WQ07379 328 aa5.62□□□□□ -1.51
VID30YGL227W PDH1Q12428 516 aaKnown RBP5.62□□□□□ -1.51
VID30YGL227W QCR6P00127 147 aa5.61□□□□□ -1.51
VID30YGL227W CAB3P36076 571 aa5.61□□□□□ -1.51
VID30YGL227W EMI2Q04409 500 aaKnown RBP5.61□□□□□ -1.51
VID30YGL227W SHE3P38272 425 aaKnown RBP5.61□□□□□ -1.51
VID30YGL227W TIF5P38431 405 aaKnown RBP5.61□□□□□ -1.51
VID30YGL227W YMR147WP40218 223 aaKnown RBP5.61□□□□□ -1.51
VID30YGL227W YGL039WP53183 348 aaKnown RBP5.61□□□□□ -1.51
VID30YGL227W CLU1Q03690 1277 aaKnown RBP5.61□□□□□ -1.51
VID30YGL227W IES4Q08561 116 aa5.61□□□□□ -1.51
VID30YGL227W WHI5Q12416 295 aa5.61□□□□□ -1.51
VID30YGL227W APM4Q99186 491 aa5.61□□□□□ -1.51
VID30YGL227W MET6P05694 767 aaKnown RBP5.61□□□□□ -1.51
VID30YGL227W TAT2P38967 592 aa5.61□□□□□ -1.51
VID30YGL227W HOS4P40480 1083 aa5.61□□□□□ -1.51
VID30YGL227W SCS3P53012 380 aa5.61□□□□□ -1.51
VID30YGL227W NUT1P53114 1132 aa5.61□□□□□ -1.51
VID30YGL227W LCD1Q04377 747 aa5.61□□□□□ -1.51
VID30YGL227W TPK1P06244 397 aa5.6□□□□□ -1.51
VID30YGL227W COX11P19516 300 aaKnown RBP5.6□□□□□ -1.51
VID30YGL227W SLA2P33338 968 aa5.6□□□□□ -1.51
VID30YGL227W KAP123P40069 1113 aaKnown RBP5.6□□□□□ -1.51
VID30YGL227W FTR1P40088 404 aa5.6□□□□□ -1.51
VID30YGL227W YGR153WP48238 217 aa5.6□□□□□ -1.51
VID30YGL227W FLC3P53121 802 aa5.6□□□□□ -1.51
VID30YGL227W RSM10Q03201 203 aa5.6□□□□□ -1.51
VID30YGL227W PLP2Q12017 286 aa5.6□□□□□ -1.51
VID30YGL227W MEX67Q99257 599 aaKnown RBP5.6□□□□□ -1.51
VID30YGL227W CHO2P05374 869 aaKnown RBP5.6□□□□□ -1.51
VID30YGL227W PUP1P25043 261 aa5.6□□□□□ -1.51
VID30YGL227W HYR1P40581 163 aaKnown RBP5.6□□□□□ -1.51
VID30YGL227W MNP1P53163 194 aaPredicted RBP5.6□□□□□ -1.51
VID30YGL227W TAF10Q12030 206 aa5.6□□□□□ -1.51
VID30YGL227W SNF1P06782 633 aaKnown RBP5.59□□□□□ -1.51
VID30YGL227W RGR1P19263 1082 aa5.59□□□□□ -1.51
VID30YGL227W DSS4P32601 143 aa5.59□□□□□ -1.51
VID30YGL227W BTT1P40314 149 aaPredicted RBP5.59□□□□□ -1.51
VID30YGL227W RPS7BP48164 190 aaKnown RBP5.59□□□□□ -1.51
VID30YGL227W ASE1P50275 885 aa5.59□□□□□ -1.51
VID30YGL227W TCO89Q08921 799 aa5.59□□□□□ -1.51
VID30YGL227W YOL098CQ12496 1037 aa5.59□□□□□ -1.51
VID30YGL227W PYC1P11154 1178 aaKnown RBP5.59□□□□□ -1.51
VID30YGL227W VMA1P17255 1071 aaKnown RBP5.59□□□□□ -1.51
VID30YGL227W RKM3P38222 552 aa5.59□□□□□ -1.51
VID30YGL227W PPX1P38698 397 aa5.59□□□□□ -1.51
VID30YGL227W UBP5P39944 805 aa5.59□□□□□ -1.51
VID30YGL227W CAF120P53836 1060 aa5.59□□□□□ -1.51
VID30YGL227W IMP4P53941 290 aaKnown RBP5.59□□□□□ -1.51
VID30YGL227W YML053CQ04978 212 aa5.59□□□□□ -1.51
VID30YGL227W RPS3P05750 240 aaKnown RBP5.58□□□□□ -1.52
VID30YGL227W DED1P06634 604 aaKnown RBP5.58□□□□□ -1.52
VID30YGL227W TSR4P25040 408 aa5.58□□□□□ -1.52
VID30YGL227W SWI4P25302 1093 aaKnown RBP5.58□□□□□ -1.52
VID30YGL227W DRE2P36152 348 aa5.58□□□□□ -1.52
VID30YGL227W NAB3P38996 802 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms