RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W YGR125WP53273 1036 aa3.37□□□□□ -1.87
SNX41YDR425W HDA1P53973 706 aa3.37□□□□□ -1.87
SNX41YDR425W NSE3Q05541 303 aa3.37□□□□□ -1.87
SNX41YDR425W LAS17Q12446 633 aa3.37□□□□□ -1.87
SNX41YDR425W TUB2P02557 457 aaKnown RBP3.37□□□□□ -1.87
SNX41YDR425W STI1P15705 589 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SNX41YDR425W URA1P28272 314 aaPredicted RBP3.37□□□□□ -1.87
SNX41YDR425W OCA5P38738 679 aa3.37□□□□□ -1.87
SNX41YDR425W PHO23P50947 330 aa3.37□□□□□ -1.87
SNX41YDR425W SLU7Q02775 382 aaKnown RBP3.37□□□□□ -1.87
SNX41YDR425W URN1Q06525 465 aaKnown RBP3.37□□□□□ -1.87
SNX41YDR425W ENV7Q12003 364 aa3.37□□□□□ -1.87
SNX41YDR425W KAR4P25583 335 aa3.36□□□□□ -1.87
SNX41YDR425W BET3P36149 193 aa3.36□□□□□ -1.87
SNX41YDR425W GGA2P38817 585 aaKnown RBP3.36□□□□□ -1.87
SNX41YDR425W RSP5P39940 809 aaKnown RBP3.36□□□□□ -1.87
SNX41YDR425W HUL4P40985 892 aa3.36□□□□□ -1.87
SNX41YDR425W YKR011CQ02209 353 aa3.36□□□□□ -1.87
SNX41YDR425W VPS30Q02948 557 aa3.36□□□□□ -1.87
SNX41YDR425W SSL1Q04673 461 aaPredicted RBP3.36□□□□□ -1.87
SNX41YDR425W YDL124WQ07551 312 aaKnown RBP3.36□□□□□ -1.87
SNX41YDR425W PPM2Q08282 695 aa3.36□□□□□ -1.87
SNX41YDR425W PUS9Q12069 462 aa3.36□□□□□ -1.87
SNX41YDR425W MPH2P0CD99 609 aa3.35□□□□□ -1.87
SNX41YDR425W TYE7P33122 291 aaPredicted RBP3.35□□□□□ -1.87
SNX41YDR425W CTF8P38877 133 aa3.35□□□□□ -1.87
SNX41YDR425W SDP1P40479 209 aa3.35□□□□□ -1.87
SNX41YDR425W BUL1P48524 976 aa3.35□□□□□ -1.87
SNX41YDR425W CAN1P04817 590 aa3.35□□□□□ -1.87
SNX41YDR425W SED4P25365 1065 aa3.35□□□□□ -1.87
SNX41YDR425W EMC3P36039 253 aa3.35□□□□□ -1.87
SNX41YDR425W MSE1P48525 536 aa3.35□□□□□ -1.87
SNX41YDR425W RTA1P53047 317 aa3.35□□□□□ -1.87
SNX41YDR425W YOL098CQ12496 1037 aa3.35□□□□□ -1.87
SNX41YDR425W PFK1P16861 987 aaKnown RBP3.34□□□□□ -1.87
SNX41YDR425W RFA1P22336 621 aaKnown RBP3.34□□□□□ -1.87
SNX41YDR425W RPD3P32561 433 aa3.34□□□□□ -1.87
SNX41YDR425W CHS7P38843 316 aa3.34□□□□□ -1.87
SNX41YDR425W MSS4P38994 779 aa3.34□□□□□ -1.87
SNX41YDR425W YIL108WP40483 696 aaKnown RBP3.34□□□□□ -1.87
SNX41YDR425W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
SNX41YDR425W YGR283CP53336 341 aaPredicted RBP3.34□□□□□ -1.87
SNX41YDR425W NOG2P53742 486 aaKnown RBP3.34□□□□□ -1.87
SNX41YDR425W SUN4P53616 420 aa3.33□□□□□ -1.88
SNX41YDR425W ERG5P54781 538 aa3.33□□□□□ -1.88
SNX41YDR425W RPN4Q03465 531 aa3.33□□□□□ -1.88
SNX41YDR425W CDC53Q12018 815 aaKnown RBP3.33□□□□□ -1.88
SNX41YDR425W GAL11P19659 1081 aa3.33□□□□□ -1.88
SNX41YDR425W SEC21P32074 935 aaKnown RBP3.33□□□□□ -1.88
SNX41YDR425W CHZ1P40019 153 aaPredicted RBP3.33□□□□□ -1.88
SNX41YDR425W AIM21P40563 679 aa3.33□□□□□ -1.88
SNX41YDR425W GYP8P43570 497 aa3.33□□□□□ -1.88
SNX41YDR425W NIT3P49954 291 aa3.33□□□□□ -1.88
SNX41YDR425W SLI1P53304 468 aa3.33□□□□□ -1.88
SNX41YDR425W ATP25Q03153 612 aa3.33□□□□□ -1.88
SNX41YDR425W TRP4P07285 380 aaPredicted RBP3.32□□□□□ -1.88
SNX41YDR425W TUB3P09734 445 aaKnown RBP3.32□□□□□ -1.88
SNX41YDR425W HRR25P29295 494 aaKnown RBP3.32□□□□□ -1.88
SNX41YDR425W CEP3P40969 608 aa3.32□□□□□ -1.88
SNX41YDR425W DAM1P53267 343 aa3.32□□□□□ -1.88
SNX41YDR425W KIN4Q01919 800 aa3.32□□□□□ -1.88
SNX41YDR425W PNS1Q12412 539 aa3.32□□□□□ -1.88
SNX41YDR425W TOM70P07213 617 aaKnown RBP3.31□□□□□ -1.88
SNX41YDR425W BUD6P41697 788 aa3.31□□□□□ -1.88
SNX41YDR425W ALG2P43636 503 aa3.31□□□□□ -1.88
SNX41YDR425W RPS9AO13516 197 aaKnown RBP3.3□□□□□ -1.88
SNX41YDR425W CYS3P31373 394 aaKnown RBP3.3□□□□□ -1.88
SNX41YDR425W TY4A-JP47023 414 aa3.3□□□□□ -1.88
SNX41YDR425W CTF4Q01454 927 aa3.3□□□□□ -1.88
SNX41YDR425W AIM39Q08223 395 aa3.3□□□□□ -1.88
SNX41YDR425W SKI3P17883 1432 aaKnown RBP3.3□□□□□ -1.88
SNX41YDR425W EFT1P32324 842 aaKnown RBP3.3□□□□□ -1.88
SNX41YDR425W SPC29P33419 253 aa3.3□□□□□ -1.88
SNX41YDR425W CTF13P35203 478 aa3.3□□□□□ -1.88
SNX41YDR425W KTR4P38131 464 aa3.3□□□□□ -1.88
SNX41YDR425W YHR078WP38799 552 aa3.3□□□□□ -1.88
SNX41YDR425W HXT16P47185 567 aa3.3□□□□□ -1.88
SNX41YDR425W MAL11P53048 616 aa3.3□□□□□ -1.88
SNX41YDR425W DUS1P53759 423 aaKnown RBP3.3□□□□□ -1.88
SNX41YDR425W REH1Q06709 432 aa3.3□□□□□ -1.88
SNX41YDR425W PEX19Q07418 342 aa3.3□□□□□ -1.88
SNX41YDR425W THI21Q08975 551 aa3.3□□□□□ -1.88
SNX41YDR425W HAL9Q12180 1030 aa3.3□□□□□ -1.88
SNX41YDR425W TRM11Q12463 433 aa3.3□□□□□ -1.88
SNX41YDR425W DAL7P21826 554 aa3.29□□□□□ -1.88
SNX41YDR425W GDH3P39708 457 aa3.29□□□□□ -1.88
SNX41YDR425W TAD1P53065 400 aa3.29□□□□□ -1.88
SNX41YDR425W ASI2P53895 289 aa3.29□□□□□ -1.88
SNX41YDR425W YOR131CQ12486 218 aa3.29□□□□□ -1.88
SNX41YDR425W PRP4P20053 465 aaKnown RBP3.28□□□□□ -1.88
SNX41YDR425W CAD1P24813 409 aaKnown RBP3.28□□□□□ -1.88
SNX41YDR425W SRP40P32583 406 aaPredicted RBP3.28□□□□□ -1.88
SNX41YDR425W LRS4Q04087 347 aaKnown RBP3.28□□□□□ -1.88
SNX41YDR425W YLR040CQ07988 224 aa3.28□□□□□ -1.88
SNX41YDR425W SWM1Q12379 170 aa3.28□□□□□ -1.88
SNX41YDR425W YBR182C-AQ8TGU6 64 aa3.28□□□□□ -1.88
SNX41YDR425W ERG4P25340 473 aa3.28□□□□□ -1.88
SNX41YDR425W YCL002CP25565 263 aa3.28□□□□□ -1.88
SNX41YDR425W PBP2P38151 413 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
SNX41YDR425W PUS2P53167 370 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms