RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A RAD27P26793 382 aa2.38□□□□□ -2.03
SDH6YDR379C-A RPP1P38786 293 aa2.38□□□□□ -2.03
SDH6YDR379C-A SSL1Q04673 461 aaPredicted RBP2.38□□□□□ -2.03
SDH6YDR379C-A YPR196WQ06595 470 aa2.38□□□□□ -2.03
SDH6YDR379C-A IRC13Q08630 104 aa2.38□□□□□ -2.03
SDH6YDR379C-A HAT1Q12341 374 aa2.38□□□□□ -2.03
SDH6YDR379C-A TUB3P09734 445 aaKnown RBP2.37□□□□□ -2.03
SDH6YDR379C-A CCT7P42943 550 aaKnown RBP2.37□□□□□ -2.03
SDH6YDR379C-A AMA1P50082 593 aa2.37□□□□□ -2.03
SDH6YDR379C-A YGR122WP53272 402 aa2.37□□□□□ -2.03
SDH6YDR379C-A RAD2P07276 1031 aa2.36□□□□□ -2.03
SDH6YDR379C-A HRB1P38922 454 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SDH6YDR379C-A PAC2P39937 518 aa2.36□□□□□ -2.03
SDH6YDR379C-A SDP1P40479 209 aa2.36□□□□□ -2.03
SDH6YDR379C-A SMX3P54999 86 aaPredicted RBP2.36□□□□□ -2.03
SDH6YDR379C-A YPL068CQ02749 293 aa2.36□□□□□ -2.03
SDH6YDR379C-A PGK1P00560 416 aaKnown RBP2.35□□□□□ -2.03
SDH6YDR379C-A NUP1P20676 1076 aa2.35□□□□□ -2.03
SDH6YDR379C-A CDC3P32457 520 aaKnown RBP2.35□□□□□ -2.03
SDH6YDR379C-A HIS7P33734 552 aaKnown RBP2.35□□□□□ -2.03
SDH6YDR379C-A YPL066WQ12194 479 aa2.35□□□□□ -2.03
SDH6YDR379C-A NOT3P06102 836 aaKnown RBP2.34□□□□□ -2.03
SDH6YDR379C-A FBP1P09201 348 aa2.33□□□□□ -2.04
SDH6YDR379C-A MOT2P34909 587 aaKnown RBP2.33□□□□□ -2.04
SDH6YDR379C-A TEL2P53038 688 aa2.33□□□□□ -2.04
SDH6YDR379C-A INO1P11986 533 aa2.32□□□□□ -2.04
SDH6YDR379C-A DED81P38707 554 aaKnown RBP2.32□□□□□ -2.04
SDH6YDR379C-A CCT4P39078 528 aaKnown RBP2.32□□□□□ -2.04
SDH6YDR379C-A FMP52P40008 231 aa2.32□□□□□ -2.04
SDH6YDR379C-A THI12P42883 340 aa2.32□□□□□ -2.04
SDH6YDR379C-A THI5P43534 340 aa2.32□□□□□ -2.04
SDH6YDR379C-A THI11P47183 340 aa2.32□□□□□ -2.04
SDH6YDR379C-A THI13Q07748 340 aa2.32□□□□□ -2.04
SDH6YDR379C-A SLK19Q08581 821 aaKnown RBP2.32□□□□□ -2.04
SDH6YDR379C-A STE13P33894 931 aa2.31□□□□□ -2.04
SDH6YDR379C-A PPX1P38698 397 aa2.31□□□□□ -2.04
SDH6YDR379C-A GGA2P38817 585 aaKnown RBP2.31□□□□□ -2.04
SDH6YDR379C-A YIL108WP40483 696 aaKnown RBP2.31□□□□□ -2.04
SDH6YDR379C-A YIR042CP40586 236 aa2.31□□□□□ -2.04
SDH6YDR379C-A HSV2P50079 448 aaPredicted RBP2.31□□□□□ -2.04
SDH6YDR379C-A NEW1Q08972 1196 aaKnown RBP2.31□□□□□ -2.04
SDH6YDR379C-A RKM4Q12504 494 aa2.31□□□□□ -2.04
SDH6YDR379C-A CYC8P14922 966 aa2.3□□□□□ -2.04
SDH6YDR379C-A RPD3P32561 433 aa2.3□□□□□ -2.04
SDH6YDR379C-A YKL107WP34251 309 aa2.3□□□□□ -2.04
SDH6YDR379C-A CTF8P38877 133 aa2.3□□□□□ -2.04
SDH6YDR379C-A NDC80P40460 691 aa2.3□□□□□ -2.04
SDH6YDR379C-A VPS30Q02948 557 aa2.3□□□□□ -2.04
SDH6YDR379C-A PRP4P20053 465 aaKnown RBP2.29□□□□□ -2.04
SDH6YDR379C-A LYP1P32487 611 aa2.29□□□□□ -2.04
SDH6YDR379C-A RPS26AP39938 119 aaKnown RBP2.29□□□□□ -2.04
SDH6YDR379C-A RPS26BP39939 119 aaKnown RBP2.29□□□□□ -2.04
SDH6YDR379C-A GYP7P48365 746 aa2.29□□□□□ -2.04
SDH6YDR379C-A STP1Q00947 519 aa2.29□□□□□ -2.04
SDH6YDR379C-A SRP1Q02821 542 aaKnown RBP2.29□□□□□ -2.04
SDH6YDR379C-A TRP2P00899 507 aaKnown RBP2.28□□□□□ -2.04
SDH6YDR379C-A GLG1P36143 616 aa2.28□□□□□ -2.04
SDH6YDR379C-A BCD1P38772 366 aa2.28□□□□□ -2.04
SDH6YDR379C-A VHR1P40522 640 aa2.28□□□□□ -2.04
SDH6YDR379C-A UBC9P50623 157 aaPredicted RBP2.28□□□□□ -2.04
SDH6YDR379C-A MRK1P50873 501 aa2.28□□□□□ -2.04
SDH6YDR379C-A RTT10Q08924 1013 aa2.28□□□□□ -2.04
SDH6YDR379C-A WHI5Q12416 295 aa2.28□□□□□ -2.04
SDH6YDR379C-A APN1P22936 367 aa2.27□□□□□ -2.05
SDH6YDR379C-A CDC12P32468 407 aaKnown RBP2.27□□□□□ -2.05
SDH6YDR379C-A IRC8P47046 822 aa2.27□□□□□ -2.05
SDH6YDR379C-A ASM4Q05166 528 aa2.27□□□□□ -2.05
SDH6YDR379C-A MPH2P0CD99 609 aa2.26□□□□□ -2.05
SDH6YDR379C-A BDH2P39713 417 aa2.26□□□□□ -2.05
SDH6YDR379C-A CTR1P49573 406 aa2.26□□□□□ -2.05
SDH6YDR379C-A YAP1802P53309 568 aa2.26□□□□□ -2.05
SDH6YDR379C-A PKH1Q03407 766 aa2.26□□□□□ -2.05
SDH6YDR379C-A TMA46Q12000 345 aaKnown RBP2.26□□□□□ -2.05
SDH6YDR379C-A LAT1P12695 482 aaKnown RBP2.25□□□□□ -2.05
SDH6YDR379C-A SPC29P33419 253 aa2.25□□□□□ -2.05
SDH6YDR379C-A SLX1P38324 304 aa2.25□□□□□ -2.05
SDH6YDR379C-A YHR078WP38799 552 aa2.25□□□□□ -2.05
SDH6YDR379C-A CDC48P25694 835 aaKnown RBP2.24□□□□□ -2.05
SDH6YDR379C-A YKR078WP36158 585 aaKnown RBP2.24□□□□□ -2.05
SDH6YDR379C-A UBS1P38290 277 aa2.24□□□□□ -2.05
SDH6YDR379C-A TSL1P38427 1098 aaKnown RBP2.24□□□□□ -2.05
SDH6YDR379C-A ARG2P40360 574 aa2.24□□□□□ -2.05
SDH6YDR379C-A TYW3P53177 273 aa2.24□□□□□ -2.05
SDH6YDR379C-A FMP30Q02883 468 aa2.24□□□□□ -2.05
SDH6YDR379C-A NRG1Q03125 231 aa2.24□□□□□ -2.05
SDH6YDR379C-A PHR1P05066 565 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SDH6YDR379C-A CLN2P20438 545 aa2.23□□□□□ -2.05
SDH6YDR379C-A MAF1P41910 395 aa2.23□□□□□ -2.05
SDH6YDR379C-A UBC11P52492 156 aa2.23□□□□□ -2.05
SDH6YDR379C-A MSC6Q08818 692 aaKnown RBP2.23□□□□□ -2.05
SDH6YDR379C-A HIR1P32479 840 aa2.22□□□□□ -2.05
SDH6YDR379C-A TYE7P33122 291 aaPredicted RBP2.22□□□□□ -2.05
SDH6YDR379C-A HOS4P40480 1083 aa2.22□□□□□ -2.05
SDH6YDR379C-A ASI2P53895 289 aa2.22□□□□□ -2.05
SDH6YDR379C-A RPA135P22138 1203 aaKnown RBP2.21□□□□□ -2.06
SDH6YDR379C-A NGG1P32494 702 aa2.21□□□□□ -2.06
SDH6YDR379C-A YBR238CP38330 731 aaKnown RBP2.21□□□□□ -2.06
SDH6YDR379C-A MUP3P38734 546 aa2.21□□□□□ -2.06
SDH6YDR379C-A REV7P38927 245 aa2.21□□□□□ -2.06
SDH6YDR379C-A ULP2P40537 1034 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 77.8 ms