RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C TAF3Q12297 353 aa4.78□□□□□ -1.64
PRP28YDR243C SCM3Q12334 223 aa4.78□□□□□ -1.64
PRP28YDR243C IES3Q12345 250 aa4.78□□□□□ -1.64
PRP28YDR243C ENT1Q12518 454 aa4.78□□□□□ -1.64
PRP28YDR243C CDC16P09798 840 aa4.77□□□□□ -1.65
PRP28YDR243C FUS1P11710 512 aa4.77□□□□□ -1.65
PRP28YDR243C KGD2P19262 463 aaPredicted RBP4.77□□□□□ -1.65
PRP28YDR243C OSM1P21375 501 aaKnown RBP4.77□□□□□ -1.65
PRP28YDR243C VPS1P21576 704 aaKnown RBP4.77□□□□□ -1.65
PRP28YDR243C MRPL25P23369 157 aa4.77□□□□□ -1.65
PRP28YDR243C DPB3P27344 201 aa4.77□□□□□ -1.65
PRP28YDR243C YJU2P28320 278 aaPredicted RBP4.77□□□□□ -1.65
PRP28YDR243C UBC6P33296 250 aaPredicted RBP4.77□□□□□ -1.65
PRP28YDR243C MIA40P36046 403 aa4.77□□□□□ -1.65
PRP28YDR243C MET1P36150 593 aa4.77□□□□□ -1.65
PRP28YDR243C REI1P38344 393 aaPredicted RBP4.77□□□□□ -1.65
PRP28YDR243C SOH1P38633 127 aa4.77□□□□□ -1.65
PRP28YDR243C CCT4P39078 528 aaKnown RBP4.77□□□□□ -1.65
PRP28YDR243C RLP7P40693 322 aaKnown RBP4.77□□□□□ -1.65
PRP28YDR243C LSB3P43603 459 aaKnown RBP4.77□□□□□ -1.65
PRP28YDR243C ALB1P47019 175 aaPredicted RBP4.77□□□□□ -1.65
PRP28YDR243C APS3P47064 194 aa4.77□□□□□ -1.65
PRP28YDR243C URB2P47108 1174 aa4.77□□□□□ -1.65
PRP28YDR243C HAM1P47119 197 aaKnown RBP4.77□□□□□ -1.65
PRP28YDR243C EFM5P53200 248 aaKnown RBP4.77□□□□□ -1.65
PRP28YDR243C IPI3P53877 555 aa4.77□□□□□ -1.65
PRP28YDR243C ENT2Q05785 613 aa4.77□□□□□ -1.65
PRP28YDR243C YLR177WQ06251 628 aa4.77□□□□□ -1.65
PRP28YDR243C RSC3Q06639 885 aa4.77□□□□□ -1.65
PRP28YDR243C MDM36Q06820 579 aa4.77□□□□□ -1.65
PRP28YDR243C SYO1Q07395 620 aa4.77□□□□□ -1.65
PRP28YDR243C YMR085WP0CF18 432 aa4.76□□□□□ -1.65
PRP28YDR243C YAP1P19880 650 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C RPO26P20435 155 aa4.76□□□□□ -1.65
PRP28YDR243C ADE2P21264 571 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C PRP22P24384 1145 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C SNQ2P32568 1501 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C SSE1P32589 693 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C GDA1P32621 518 aa4.76□□□□□ -1.65
PRP28YDR243C SAS3P34218 831 aa4.76□□□□□ -1.65
PRP28YDR243C YKL063CP35725 167 aa4.76□□□□□ -1.65
PRP28YDR243C KES1P35844 434 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C MAL31P38156 614 aa4.76□□□□□ -1.65
PRP28YDR243C SLX1P38324 304 aa4.76□□□□□ -1.65
PRP28YDR243C STN1P38960 494 aa4.76□□□□□ -1.65
PRP28YDR243C FCY21P40039 528 aa4.76□□□□□ -1.65
PRP28YDR243C MRX1P40050 688 aa4.76□□□□□ -1.65
PRP28YDR243C MDJ2P42834 146 aa4.76□□□□□ -1.65
PRP28YDR243C TRS85P46944 698 aa4.76□□□□□ -1.65
PRP28YDR243C MDV1P47025 714 aa4.76□□□□□ -1.65
PRP28YDR243C SQS1P53866 767 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C CIK1Q01649 594 aa4.76□□□□□ -1.65
PRP28YDR243C ESC1Q03661 1658 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C RSM24Q03976 319 aa4.76□□□□□ -1.65
PRP28YDR243C PDR15Q04182 1529 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C VTI1Q04338 217 aa4.76□□□□□ -1.65
PRP28YDR243C ATG17Q06410 417 aa4.76□□□□□ -1.65
PRP28YDR243C OPY2Q06810 360 aa4.76□□□□□ -1.65
PRP28YDR243C YPR204WQ08995 1032 aa4.76□□□□□ -1.65
PRP28YDR243C TY3B-IQ7LHG5 1498 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C NMT1P14743 455 aa4.76□□□□□ -1.65
PRP28YDR243C THR1P17423 357 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C APN1P22936 367 aa4.76□□□□□ -1.65
PRP28YDR243C TSR4P25040 408 aa4.76□□□□□ -1.65
PRP28YDR243C HSP30P25619 332 aa4.76□□□□□ -1.65
PRP28YDR243C MSH2P25847 964 aa4.76□□□□□ -1.65
PRP28YDR243C AFG2P32794 780 aa4.76□□□□□ -1.65
PRP28YDR243C NFU1P32860 256 aa4.76□□□□□ -1.65
PRP28YDR243C MNN2P38069 597 aa4.76□□□□□ -1.65
PRP28YDR243C PSY4P38193 441 aa4.76□□□□□ -1.65
PRP28YDR243C BOI2P39969 1040 aa4.76□□□□□ -1.65
PRP28YDR243C IRR1P40541 1150 aa4.76□□□□□ -1.65
PRP28YDR243C INA22P40576 216 aa4.76□□□□□ -1.65
PRP28YDR243C SAP185P40856 1058 aa4.76□□□□□ -1.65
PRP28YDR243C STB2P46679 850 aa4.76□□□□□ -1.65
PRP28YDR243C DAS1P47005 663 aa4.76□□□□□ -1.65
PRP28YDR243C YJR079WP47126 109 aa4.76□□□□□ -1.65
PRP28YDR243C UBA2P52488 636 aa4.76□□□□□ -1.65
PRP28YDR243C ALT1P52893 592 aa4.76□□□□□ -1.65
PRP28YDR243C TEL2P53038 688 aa4.76□□□□□ -1.65
PRP28YDR243C MDM1Q01846 1127 aa4.76□□□□□ -1.65
PRP28YDR243C MUB1Q03162 620 aa4.76□□□□□ -1.65
PRP28YDR243C PPM1Q04081 328 aa4.76□□□□□ -1.65
PRP28YDR243C SXM1Q04175 944 aaKnown RBP4.76□□□□□ -1.65
PRP28YDR243C YDL121CQ07541 149 aa4.76□□□□□ -1.65
PRP28YDR243C YOR289WQ12012 251 aaPredicted RBP4.76□□□□□ -1.65
PRP28YDR243C ATP16Q12165 160 aa4.76□□□□□ -1.65
PRP28YDR243C MSH5Q12175 901 aa4.76□□□□□ -1.65
PRP28YDR243C LYS2P07702 1392 aa4.75□□□□□ -1.65
PRP28YDR243C ADE6P38972 1358 aaKnown RBP4.75□□□□□ -1.65
PRP28YDR243C PDE2P06776 526 aa4.75□□□□□ -1.65
PRP28YDR243C KAR1P11927 433 aa4.75□□□□□ -1.65
PRP28YDR243C HNM1P19807 563 aa4.75□□□□□ -1.65
PRP28YDR243C YEL043WP32618 956 aa4.75□□□□□ -1.65
PRP28YDR243C TFC4P33339 1025 aa4.75□□□□□ -1.65
PRP28YDR243C RSM22P36056 628 aa4.75□□□□□ -1.65
PRP28YDR243C BOI1P38041 980 aaKnown RBP4.75□□□□□ -1.65
PRP28YDR243C PMC1P38929 1173 aaPredicted RBP4.75□□□□□ -1.65
PRP28YDR243C SCS2P40075 244 aaKnown RBP4.75□□□□□ -1.65
PRP28YDR243C HUL4P40985 892 aa4.75□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms