RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W KEX2P13134 814 aa6.26□□□□□ -1.41
VMS1YDR049W PCL2P25693 308 aa6.26□□□□□ -1.41
VMS1YDR049W CKB2P38930 258 aa6.26□□□□□ -1.41
VMS1YDR049W SPC72P39723 622 aa6.26□□□□□ -1.41
VMS1YDR049W GZF3P42944 551 aaKnown RBP6.26□□□□□ -1.41
VMS1YDR049W YGR250CP53316 781 aaKnown RBP6.26□□□□□ -1.41
VMS1YDR049W VPS9P54787 451 aa6.26□□□□□ -1.41
VMS1YDR049W UTP21Q06078 939 aaPredicted RBP6.26□□□□□ -1.41
VMS1YDR049W HBN1Q96VH4 193 aa6.26□□□□□ -1.41
VMS1YDR049W SRD1P09007 221 aa6.26□□□□□ -1.41
VMS1YDR049W TOP3P13099 656 aa6.26□□□□□ -1.41
VMS1YDR049W PMS1P14242 873 aa6.26□□□□□ -1.41
VMS1YDR049W MRPL33P20084 86 aa6.26□□□□□ -1.41
VMS1YDR049W RPL5P26321 297 aaKnown RBP6.26□□□□□ -1.41
VMS1YDR049W YEL1P34225 687 aa6.26□□□□□ -1.41
VMS1YDR049W RPC37P36121 282 aa6.26□□□□□ -1.41
VMS1YDR049W TIF5P38431 405 aaKnown RBP6.26□□□□□ -1.41
VMS1YDR049W LSM5P40089 93 aaKnown RBP6.26□□□□□ -1.41
VMS1YDR049W RIC1P40395 1056 aa6.26□□□□□ -1.41
VMS1YDR049W XKS1P42826 600 aa6.26□□□□□ -1.41
VMS1YDR049W AGX1P43567 385 aa6.26□□□□□ -1.41
VMS1YDR049W CIT3P43635 486 aa6.26□□□□□ -1.41
VMS1YDR049W MAD3P47074 515 aa6.26□□□□□ -1.41
VMS1YDR049W NUT1P53114 1132 aa6.26□□□□□ -1.41
VMS1YDR049W MNP1P53163 194 aaPredicted RBP6.26□□□□□ -1.41
VMS1YDR049W YOL114CQ12322 202 aa6.26□□□□□ -1.41
VMS1YDR049W FLP1P03870 423 aa6.25□□□□□ -1.41
VMS1YDR049W PET111P08468 800 aa6.25□□□□□ -1.41
VMS1YDR049W MSH3P25336 1018 aa6.25□□□□□ -1.41
VMS1YDR049W RPN2P32565 945 aaKnown RBP6.25□□□□□ -1.41
VMS1YDR049W DLD1P32891 587 aa6.25□□□□□ -1.41
VMS1YDR049W APM2P38700 605 aa6.25□□□□□ -1.41
VMS1YDR049W POL31P46957 487 aa6.25□□□□□ -1.41
VMS1YDR049W PIL1P53252 339 aaKnown RBP6.25□□□□□ -1.41
VMS1YDR049W FDC1Q03034 503 aa6.25□□□□□ -1.41
VMS1YDR049W ATG38Q05789 226 aaKnown RBP6.25□□□□□ -1.41
VMS1YDR049W ERF2Q06551 359 aa6.25□□□□□ -1.41
VMS1YDR049W MLH2Q07980 695 aa6.25□□□□□ -1.41
VMS1YDR049W CDC9P04819 755 aa6.24□□□□□ -1.41
VMS1YDR049W RAD18P10862 487 aa6.24□□□□□ -1.41
VMS1YDR049W SFL1P20134 766 aa6.24□□□□□ -1.41
VMS1YDR049W RAD53P22216 821 aa6.24□□□□□ -1.41
VMS1YDR049W PPQ1P32945 549 aa6.24□□□□□ -1.41
VMS1YDR049W MDL1P33310 695 aa6.24□□□□□ -1.41
VMS1YDR049W CCL1P37366 393 aa6.24□□□□□ -1.41
VMS1YDR049W YLF2P38746 405 aa6.24□□□□□ -1.41
VMS1YDR049W ETP1P38748 585 aaKnown RBP6.24□□□□□ -1.41
VMS1YDR049W EMP65P40085 556 aa6.24□□□□□ -1.41
VMS1YDR049W YTA6P40328 754 aa6.24□□□□□ -1.41
VMS1YDR049W RPA14P50106 137 aa6.24□□□□□ -1.41
VMS1YDR049W SRC1Q03707 834 aa6.24□□□□□ -1.41
VMS1YDR049W YRM1Q12340 786 aa6.24□□□□□ -1.41
VMS1YDR049W PGA3Q12746 312 aaKnown RBP6.24□□□□□ -1.41
VMS1YDR049W SEC21P32074 935 aaKnown RBP6.24□□□□□ -1.41
VMS1YDR049W SMY1P32364 656 aaKnown RBP6.24□□□□□ -1.41
VMS1YDR049W CBF2P32504 956 aa6.24□□□□□ -1.41
VMS1YDR049W MIC60P36112 540 aa6.24□□□□□ -1.41
VMS1YDR049W SAH1P39954 449 aaKnown RBP6.24□□□□□ -1.41
VMS1YDR049W YEL068CP39977 110 aa6.24□□□□□ -1.41
VMS1YDR049W YER034WP40022 185 aaKnown RBP6.24□□□□□ -1.41
VMS1YDR049W RMD8P43620 662 aa6.24□□□□□ -1.41
VMS1YDR049W ZIP2P53061 704 aa6.24□□□□□ -1.41
VMS1YDR049W APL4Q12028 832 aa6.24□□□□□ -1.41
VMS1YDR049W SEM1O94742 89 aa6.23□□□□□ -1.41
VMS1YDR049W SWI5P08153 709 aa6.23□□□□□ -1.41
VMS1YDR049W COX11P19516 300 aaKnown RBP6.23□□□□□ -1.41
VMS1YDR049W SPT8P38915 602 aa6.23□□□□□ -1.41
VMS1YDR049W RAD55P38953 406 aa6.23□□□□□ -1.41
VMS1YDR049W FMP10P40098 244 aa6.23□□□□□ -1.41
VMS1YDR049W IMA5P40884 581 aa6.23□□□□□ -1.41
VMS1YDR049W SKP2P42843 763 aa6.23□□□□□ -1.41
VMS1YDR049W BUD27P43573 796 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
VMS1YDR049W MNN11P46985 422 aaKnown RBP6.23□□□□□ -1.41
VMS1YDR049W AIM14P53109 570 aa6.23□□□□□ -1.41
VMS1YDR049W YGL140CP53120 1219 aa6.23□□□□□ -1.41
VMS1YDR049W ERV25P54837 211 aaKnown RBP6.23□□□□□ -1.41
VMS1YDR049W NFI1Q12216 726 aa6.23□□□□□ -1.41
VMS1YDR049W BI4P03879 638 aa6.22□□□□□ -1.41
VMS1YDR049W YER152CP10356 443 aa6.22□□□□□ -1.41
VMS1YDR049W RPB4P20433 221 aaPredicted RBP6.22□□□□□ -1.41
VMS1YDR049W CBP3P21560 335 aa6.22□□□□□ -1.41
VMS1YDR049W MCM3P24279 971 aaKnown RBP6.22□□□□□ -1.41
VMS1YDR049W MNE1P24720 663 aa6.22□□□□□ -1.41
VMS1YDR049W HBS1P32769 611 aaKnown RBP6.22□□□□□ -1.41
VMS1YDR049W RER2P35196 286 aa6.22□□□□□ -1.41
VMS1YDR049W RDH54P38086 958 aa6.22□□□□□ -1.41
VMS1YDR049W RFC1P38630 861 aaKnown RBP6.22□□□□□ -1.41
VMS1YDR049W YJL068CP40363 299 aa6.22□□□□□ -1.41
VMS1YDR049W AIM20P40451 204 aa6.22□□□□□ -1.41
VMS1YDR049W FOL2P51601 243 aaKnown RBP6.22□□□□□ -1.41
VMS1YDR049W SLD3P53135 668 aa6.22□□□□□ -1.41
VMS1YDR049W CNM67P53865 581 aaKnown RBP6.22□□□□□ -1.41
VMS1YDR049W CTR9P89105 1077 aa6.22□□□□□ -1.41
VMS1YDR049W YMR155WQ03795 547 aa6.22□□□□□ -1.41
VMS1YDR049W SMD2Q06217 110 aaKnown RBP6.22□□□□□ -1.41
VMS1YDR049W HIM1Q06674 414 aa6.22□□□□□ -1.41
VMS1YDR049W YCG1Q06680 1035 aa6.22□□□□□ -1.41
VMS1YDR049W PEX15Q08215 383 aa6.22□□□□□ -1.41
VMS1YDR049W DIT1P21623 536 aa6.22□□□□□ -1.41
VMS1YDR049W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms