RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWH43	YCR017C	EAF5	P39995	279 aa		4.38	□□□□□ -1.71
CWH43	YCR017C	LAM5	P43560	674 aa		4.38	□□□□□ -1.71
CWH43	YCR017C	PIL1	P53252	339 aa	Known RBP	4.38	□□□□□ -1.71
CWH43	YCR017C	CBK1	P53894	756 aa		4.38	□□□□□ -1.71
CWH43	YCR017C	TCO89	Q08921	799 aa		4.38	□□□□□ -1.71
CWH43	YCR017C	PUS1	Q12211	544 aa	Known RBP	4.38	□□□□□ -1.71
CWH43	YCR017C	YLR422W	Q06409	1932 aa		4.38	□□□□□ -1.71
CWH43	YCR017C	DED1	P06634	604 aa	Known RBP	4.37	□□□□□ -1.71
CWH43	YCR017C	CDC6	P09119	513 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	RGR1	P19263	1082 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	DBP5	P20449	482 aa	Known RBP	4.37	□□□□□ -1.71
CWH43	YCR017C	TRM2	P33753	639 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	UBP13	P38187	747 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	VID28	P40547	921 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	OPT1	P40897	799 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	FIG4	P42837	879 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	BRE2	P43132	505 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	EPL1	P43572	832 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	COS5	P47187	383 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	YNL134C	P53912	376 aa	Known RBP	4.37	□□□□□ -1.71
CWH43	YCR017C	YPR109W	Q06104	294 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	GYP1	Q08484	637 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
CWH43	YCR017C	HAP2	P06774	265 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	RAM1	P22007	431 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	BCD1	P38772	366 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	TVP23	P38962	199 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	RTT102	P53330	157 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	TRS120	Q04183	1289 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	IES4	Q08561	116 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	PTC5	Q12511	572 aa		4.37	□□□□□ -1.71
CWH43	YCR017C	LAA1	P39526	2014 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	NAT1	P12945	854 aa	Known RBP	4.36	□□□□□ -1.71
CWH43	YCR017C	HCA4	P20448	770 aa	Known RBP	4.36	□□□□□ -1.71
CWH43	YCR017C	ATG19	P35193	415 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	MAL33	P38157	468 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	RFC5	P38251	354 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	MMS4	P38257	691 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	RGD1	P38339	666 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	RPN3	P40016	523 aa	Known RBP	4.36	□□□□□ -1.71
CWH43	YCR017C	DAS1	P47005	663 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	GCV2	P49095	1034 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	UBA2	P52488	636 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	SCS3	P53012	380 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	YNL034W	P53963	612 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	YNL018C	P53976	612 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	DOT1	Q04089	582 aa	Known RBP	4.36	□□□□□ -1.71
CWH43	YCR017C	DNL4	Q08387	944 aa	Predicted RBP	4.36	□□□□□ -1.71
CWH43	YCR017C	YPL277C	Q08989	487 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	DAP1	Q12091	152 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	SGT2	Q12118	346 aa	Known RBP	4.36	□□□□□ -1.71
CWH43	YCR017C	RAD59	Q12223	238 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	HIS4	P00815	799 aa	Known RBP	4.36	□□□□□ -1.71
CWH43	YCR017C	NUD1	P32336	851 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	MET4	P32389	672 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	MNN4	P36044	1178 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	YPT11	P48559	417 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	ENV11	P53246	860 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	SDA1	P53313	767 aa	Known RBP	4.36	□□□□□ -1.71
CWH43	YCR017C	SPO71	Q03868	1245 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	GIS4	Q04233	774 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	AIM33	Q04516	312 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	COG4	Q06096	861 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	GPI13	Q07830	1017 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	CIR2	Q08822	631 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	MED1	Q12321	566 aa		4.36	□□□□□ -1.71
CWH43	YCR017C	YEL076C-A	P0CX16	216 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	YLR464W	P0CX17	216 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	SSB1	P11484	613 aa	Known RBP	4.35	□□□□□ -1.71
CWH43	YCR017C	URA1	P28272	314 aa	Predicted RBP	4.35	□□□□□ -1.71
CWH43	YCR017C	YHL026C	P38740	315 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	YEL076C	P39971	216 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	SSB2	P40150	613 aa	Known RBP	4.35	□□□□□ -1.71
CWH43	YCR017C	DDP1	Q99321	188 aa	Known RBP	4.35	□□□□□ -1.71
CWH43	YCR017C	KGD2	P19262	463 aa	Predicted RBP	4.35	□□□□□ -1.71
CWH43	YCR017C	FTR1	P40088	404 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	YFL052W	P43551	465 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
CWH43	YCR017C	ERV41	Q04651	352 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	GIS3	Q12418	502 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	HSP82	P02829	709 aa	Known RBP	4.35	□□□□□ -1.71
CWH43	YCR017C	TAF13	P11747	167 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	EFM2	P38347	419 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	MNP1	P53163	194 aa	Predicted RBP	4.35	□□□□□ -1.71
CWH43	YCR017C	PGA2	P53903	129 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	YNL146W	P53906	100 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	SVF1	Q05515	481 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	HRQ1	Q05549	1077 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	MAG2	Q06436	670 aa	Known RBP	4.35	□□□□□ -1.71
CWH43	YCR017C	YLH47	Q06493	454 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	PEX19	Q07418	342 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	OXR1	Q08952	273 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	YPR015C	Q12531	247 aa		4.35	□□□□□ -1.71
CWH43	YCR017C	PFK1	P16861	987 aa	Known RBP	4.34	□□□□□ -1.71
CWH43	YCR017C	VPS24	P36095	224 aa	Known RBP	4.34	□□□□□ -1.71
CWH43	YCR017C	DID4	P36108	232 aa		4.34	□□□□□ -1.71
CWH43	YCR017C	UBX7	P38349	436 aa		4.34	□□□□□ -1.71
CWH43	YCR017C	YFL034W	P43564	1073 aa		4.34	□□□□□ -1.71
CWH43	YCR017C	ADA2	Q02336	434 aa		4.34	□□□□□ -1.71
CWH43	YCR017C	VPS20	Q04272	221 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms