RNA–Protein interactions for RNA: YCL074W

YCL074W, Transcript of Pseudogene: encodes fragment of Ty Pol protein, yeast

Gene YCL074W, Length 927 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL074W	YCL074W	LCB2	P40970	561 aa		11.06	□□□□□ -0.64
YCL074W	YCL074W	YJR039W	P47107	1121 aa		11.06	□□□□□ -0.64
YCL074W	YCL074W	YGR117C	P53270	476 aa		11.06	□□□□□ -0.64
YCL074W	YCL074W	YML037C	Q03703	340 aa		11.06	□□□□□ -0.64
YCL074W	YCL074W	YML082W	Q04533	649 aa	Known RBP	11.06	□□□□□ -0.64
YCL074W	YCL074W	GAL2	P13181	574 aa		11.05	□□□□□ -0.64
YCL074W	YCL074W	DBP5	P20449	482 aa	Known RBP	11.05	□□□□□ -0.64
YCL074W	YCL074W	SEC21	P32074	935 aa	Known RBP	11.05	□□□□□ -0.64
YCL074W	YCL074W	YSC83	P32792	385 aa		11.05	□□□□□ -0.64
YCL074W	YCL074W	RAD54	P32863	898 aa		11.05	□□□□□ -0.64
YCL074W	YCL074W	SPC72	P39723	622 aa		11.05	□□□□□ -0.64
YCL074W	YCL074W	TRS85	P46944	698 aa		11.05	□□□□□ -0.64
YCL074W	YCL074W	HUL5	P53119	910 aa		11.05	□□□□□ -0.64
YCL074W	YCL074W	ARK1	P53974	638 aa		11.05	□□□□□ -0.64
YCL074W	YCL074W	DON1	Q05610	365 aa		11.05	□□□□□ -0.64
YCL074W	YCL074W	GUD1	Q07729	489 aa		11.05	□□□□□ -0.64
YCL074W	YCL074W	SPO21	Q12411	609 aa		11.05	□□□□□ -0.64
YCL074W	YCL074W	RKM4	Q12504	494 aa		11.05	□□□□□ -0.64
YCL074W	YCL074W	TY1B-A	O13527	1196 aa	Known RBP	11.04	□□□□□ -0.64
YCL074W	YCL074W	BCH2	P36122	765 aa		11.04	□□□□□ -0.64
YCL074W	YCL074W	SAK1	P38990	1142 aa		11.04	□□□□□ -0.64
YCL074W	YCL074W	ZPR1	P53303	486 aa	Known RBP	11.04	□□□□□ -0.64
YCL074W	YCL074W	TMA64	Q04600	565 aa	Known RBP	11.04	□□□□□ -0.64
YCL074W	YCL074W	CRD1	Q07560	283 aa		11.04	□□□□□ -0.64
YCL074W	YCL074W	AIM41	Q12032	185 aa		11.04	□□□□□ -0.64
YCL074W	YCL074W	YLR462W	O13556	202 aa		11.03	□□□□□ -0.64
YCL074W	YCL074W	GAP1	P19145	602 aa	Predicted RBP	11.03	□□□□□ -0.64
YCL074W	YCL074W	KIP1	P28742	1111 aa		11.03	□□□□□ -0.64
YCL074W	YCL074W	VPS35	P34110	944 aa		11.03	□□□□□ -0.64
YCL074W	YCL074W	TGL1	P34163	548 aa		11.03	□□□□□ -0.64
YCL074W	YCL074W	YHL049C	P38722	271 aa		11.03	□□□□□ -0.64
YCL074W	YCL074W	YEL075C	P39972	122 aa		11.03	□□□□□ -0.64
YCL074W	YCL074W	LCP5	P40079	357 aa	Predicted RBP	11.03	□□□□□ -0.64
YCL074W	YCL074W	YER189W	P40104	122 aa		11.03	□□□□□ -0.64
YCL074W	YCL074W	FET4	P40988	552 aa		11.03	□□□□□ -0.64
YCL074W	YCL074W	YNL320W	P42840	284 aa		11.03	□□□□□ -0.64
YCL074W	YCL074W	YFL064C	P43540	174 aa		11.03	□□□□□ -0.64
YCL074W	YCL074W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	11.03	□□□□□ -0.64	not detected
YCL074W	YCL074W	YLR326W	Q06170	240 aa	Known RBP	11.03	□□□□□ -0.64
YCL074W	YCL074W	YBL111C	Q3E7Y5	667 aa		11.03	□□□□□ -0.64
YCL074W	YCL074W	SAM1	P10659	382 aa	Known RBP	11.02	□□□□□ -0.65
YCL074W	YCL074W	ATG19	P35193	415 aa		11.02	□□□□□ -0.65
YCL074W	YCL074W	HIS2	P38635	335 aa		11.02	□□□□□ -0.65
YCL074W	YCL074W	PTA1	Q01329	785 aa	Predicted RBP	11.02	□□□□□ -0.65
YCL074W	YCL074W	SPH1	Q06160	661 aa		11.02	□□□□□ -0.65
YCL074W	YCL074W	CDC33	P07260	213 aa	Known RBP	11.01	□□□□□ -0.65
YCL074W	YCL074W	TRZ1	P36159	838 aa	Predicted RBP	11.01	□□□□□ -0.65
YCL074W	YCL074W	FPK1	P53739	893 aa		11.01	□□□□□ -0.65
YCL074W	YCL074W	SVF1	Q05515	481 aa		11.01	□□□□□ -0.65
YCL074W	YCL074W	AIM7	Q12156	149 aa		11.01	□□□□□ -0.65
YCL074W	YCL074W	YDL206W	Q12424	762 aa		11.01	□□□□□ -0.65
YCL074W	YCL074W	ARG4	P04076	463 aa	Predicted RBP	11	□□□□□ -0.65
YCL074W	YCL074W	PRP9	P19736	530 aa	Known RBP	11	□□□□□ -0.65
YCL074W	YCL074W	PER1	P25625	357 aa		11	□□□□□ -0.65
YCL074W	YCL074W	NAM7	P30771	971 aa	Known RBP	11	□□□□□ -0.65
YCL074W	YCL074W	MUD1	P32605	298 aa	Known RBP	11	□□□□□ -0.65
YCL074W	YCL074W	EXO5	P38289	585 aa		11	□□□□□ -0.65
YCL074W	YCL074W	RRT2	P38332	387 aa		11	□□□□□ -0.65
YCL074W	YCL074W	CCT2	P39076	527 aa	Known RBP	11	□□□□□ -0.65
YCL074W	YCL074W	BRO1	P48582	844 aa		11	□□□□□ -0.65
YCL074W	YCL074W	YMR187C	Q03236	431 aa		11	□□□□□ -0.65
YCL074W	YCL074W	CSR2	Q12734	1121 aa		11	□□□□□ -0.65
YCL074W	YCL074W	RPB2	P08518	1224 aa	Known RBP	10.99	□□□□□ -0.65
YCL074W	YCL074W	TFC4	P33339	1025 aa		10.99	□□□□□ -0.65
YCL074W	YCL074W	SQT1	P35184	431 aa		10.99	□□□□□ -0.65
YCL074W	YCL074W	ECM1	P39715	212 aa		10.99	□□□□□ -0.65
YCL074W	YCL074W	KAP123	P40069	1113 aa	Known RBP	10.99	□□□□□ -0.65
YCL074W	YCL074W	RIM8	P53179	542 aa		10.99	□□□□□ -0.65
YCL074W	YCL074W	UTP6	Q02354	440 aa	Known RBP	10.99	□□□□□ -0.65
YCL074W	YCL074W	MTG1	Q03151	367 aa	Predicted RBP	10.99	□□□□□ -0.65
YCL074W	YCL074W	TDA9	Q04545	1251 aa		10.99	□□□□□ -0.65
YCL074W	YCL074W	HIF1	Q12373	385 aa		10.99	□□□□□ -0.65
YCL074W	YCL074W	SEY1	Q99287	776 aa		10.99	□□□□□ -0.65
YCL074W	YCL074W	ADH4	P10127	382 aa		10.98	□□□□□ -0.65
YCL074W	YCL074W	CDC10	P25342	322 aa	Known RBP	10.98	□□□□□ -0.65
YCL074W	YCL074W	OAF3	P36023	863 aa		10.98	□□□□□ -0.65
YCL074W	YCL074W	MCR1	P36060	302 aa	Known RBP	10.98	□□□□□ -0.65
YCL074W	YCL074W	YKR018C	P36114	725 aa		10.98	□□□□□ -0.65
YCL074W	YCL074W	TIF5	P38431	405 aa	Known RBP	10.98	□□□□□ -0.65
YCL074W	YCL074W	YTA12	P40341	825 aa		10.98	□□□□□ -0.65
YCL074W	YCL074W	SAP185	P40856	1058 aa		10.98	□□□□□ -0.65
YCL074W	YCL074W	TAM41	P53230	385 aa		10.98	□□□□□ -0.65
YCL074W	YCL074W	RPL22B	P56628	122 aa	Known RBP	10.98	□□□□□ -0.65
YCL074W	YCL074W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	10.98	□□□□□ -0.65	not detected
YCL074W	YCL074W	SLX4	Q12098	748 aa		10.98	□□□□□ -0.65
YCL074W	YCL074W	SPT2	P06843	333 aa	Predicted RBP	10.97	□□□□□ -0.65
YCL074W	YCL074W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	10.97	□□□□□ -0.65	not detected
YCL074W	YCL074W	YME1	P32795	747 aa		10.97	□□□□□ -0.65
YCL074W	YCL074W	OCT1	P35999	772 aa		10.97	□□□□□ -0.65
YCL074W	YCL074W	ECM2	P38241	364 aa	Known RBP	10.97	□□□□□ -0.65
YCL074W	YCL074W	YSW1	P38280	609 aa		10.97	□□□□□ -0.65
YCL074W	YCL074W	SLI15	P38283	698 aa		10.97	□□□□□ -0.65
YCL074W	YCL074W	MED8	P38304	223 aa		10.97	□□□□□ -0.65
YCL074W	YCL074W	MMS21	P38632	267 aa		10.97	□□□□□ -0.65
YCL074W	YCL074W	NMD5	P46970	1048 aa		10.97	□□□□□ -0.65
YCL074W	YCL074W	VPS70	P47161	811 aa		10.97	□□□□□ -0.65
YCL074W	YCL074W	YGL039W	P53183	348 aa	Known RBP	10.97	□□□□□ -0.65
YCL074W	YCL074W	ATG16	Q03818	150 aa		10.97	□□□□□ -0.65
YCL074W	YCL074W	DUS3	Q06053	668 aa	Known RBP	10.97	□□□□□ -0.65
YCL074W	YCL074W	UBX5	Q06682	500 aa		10.97	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms