RNA–Protein interactions for RNA: YCL048W-A

YCL048W-A, Transcript of Putative protein of unknown function, yeastyeast

Gene YCL048W-A, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL048W-AYCL048W-A SMC3P47037 1230 aa12.89□□□□□ -0.35
YCL048W-AYCL048W-A CUL3P53202 744 aa12.89□□□□□ -0.35
YCL048W-AYCL048W-A TIM8P57744 87 aa12.89□□□□□ -0.35
YCL048W-AYCL048W-A NEW1Q08972 1196 aaKnown RBP12.89□□□□□ -0.35
YCL048W-AYCL048W-A MDM20Q12387 796 aaKnown RBP12.89□□□□□ -0.35
YCL048W-AYCL048W-A SCP160P06105 1222 aaKnown RBP RIP-Chip data12.88□□□□□ -0.35not detected
YCL048W-AYCL048W-A MUD1P32605 298 aaKnown RBP12.88□□□□□ -0.35
YCL048W-AYCL048W-A RTT107P38850 1070 aa12.88□□□□□ -0.35
YCL048W-AYCL048W-A ACF4P47129 309 aa12.88□□□□□ -0.35
YCL048W-AYCL048W-A ULP1Q02724 621 aa12.88□□□□□ -0.35
YCL048W-AYCL048W-A YLR297WQ05899 129 aa12.88□□□□□ -0.35
YCL048W-AYCL048W-A RRP6Q12149 733 aaKnown RBP12.88□□□□□ -0.35
YCL048W-AYCL048W-A RIF1P29539 1916 aa12.88□□□□□ -0.35
YCL048W-AYCL048W-A MSS51P32335 436 aa12.87□□□□□ -0.35
YCL048W-AYCL048W-A PAH1P32567 862 aa12.87□□□□□ -0.35
YCL048W-AYCL048W-A TMT1P32643 299 aa12.87□□□□□ -0.35
YCL048W-AYCL048W-A ALF1P53904 254 aa12.87□□□□□ -0.35
YCL048W-AYCL048W-A ESC2Q06340 456 aa12.87□□□□□ -0.35
YCL048W-AYCL048W-A YPR078CQ06813 372 aa12.87□□□□□ -0.35
YCL048W-AYCL048W-A ATG9Q12142 997 aa12.87□□□□□ -0.35
YCL048W-AYCL048W-A SMC2P38989 1170 aaKnown RBP12.86□□□□□ -0.35
YCL048W-AYCL048W-A AFG3P39925 761 aa12.86□□□□□ -0.35
YCL048W-AYCL048W-A YAP5P40574 245 aa12.86□□□□□ -0.35
YCL048W-AYCL048W-A VPS62P53285 467 aa12.86□□□□□ -0.35
YCL048W-AYCL048W-A WHI2P12611 486 aa12.85□□□□□ -0.35
YCL048W-AYCL048W-A SKG6P32900 734 aaPredicted RBP12.85□□□□□ -0.35
YCL048W-AYCL048W-A YKL023WP36103 277 aaKnown RBP12.85□□□□□ -0.35
YCL048W-AYCL048W-A STU2P46675 888 aa12.85□□□□□ -0.35
YCL048W-AYCL048W-A ENV11P53246 860 aa12.85□□□□□ -0.35
YCL048W-AYCL048W-A ERG5P54781 538 aa12.85□□□□□ -0.35
YCL048W-AYCL048W-A VPS38Q05919 439 aa12.85□□□□□ -0.35
YCL048W-AYCL048W-A CSR1Q06705 408 aaKnown RBP12.85□□□□□ -0.35
YCL048W-AYCL048W-A APL4Q12028 832 aa12.85□□□□□ -0.35
YCL048W-AYCL048W-A NAT1P12945 854 aaKnown RBP12.84□□□□□ -0.35
YCL048W-AYCL048W-A BUD2P33314 1104 aa12.84□□□□□ -0.35
YCL048W-AYCL048W-A SCD6P45978 349 aaKnown RBP RIP-Chip data12.84□□□□□ -0.35not detected
YCL048W-AYCL048W-A ASN1P49089 572 aaKnown RBP12.84□□□□□ -0.35
YCL048W-AYCL048W-A UME1Q03010 460 aa12.84□□□□□ -0.35
YCL048W-AYCL048W-A UTP5Q04177 643 aaKnown RBP12.84□□□□□ -0.35
YCL048W-AYCL048W-A UTP14Q04500 899 aaKnown RBP12.84□□□□□ -0.35
YCL048W-AYCL048W-A MRX3P38172 270 aa12.83□□□□□ -0.36
YCL048W-AYCL048W-A MMS4P38257 691 aa12.83□□□□□ -0.36
YCL048W-AYCL048W-A ORC5P50874 479 aa12.83□□□□□ -0.36
YCL048W-AYCL048W-A MNP1P53163 194 aaPredicted RBP12.83□□□□□ -0.36
YCL048W-AYCL048W-A ESBP6P53918 673 aa12.83□□□□□ -0.36
YCL048W-AYCL048W-A OPY2Q06810 360 aa12.83□□□□□ -0.36
YCL048W-AYCL048W-A PPR1P07272 904 aaPredicted RBP12.82□□□□□ -0.36
YCL048W-AYCL048W-A XRS2P33301 854 aa12.82□□□□□ -0.36
YCL048W-AYCL048W-A DUR3P33413 735 aa12.82□□□□□ -0.36
YCL048W-AYCL048W-A NIP100P33420 868 aa12.82□□□□□ -0.36
YCL048W-AYCL048W-A MNR2P35724 969 aa12.82□□□□□ -0.36
YCL048W-AYCL048W-A VID24P38263 362 aa12.82□□□□□ -0.36
YCL048W-AYCL048W-A FTR1P40088 404 aa12.82□□□□□ -0.36
YCL048W-AYCL048W-A SHQ1P40486 507 aaPredicted RBP12.82□□□□□ -0.36
YCL048W-AYCL048W-A HSH155P49955 971 aaKnown RBP12.82□□□□□ -0.36
YCL048W-AYCL048W-A RPA49Q01080 415 aaPredicted RBP12.82□□□□□ -0.36
YCL048W-AYCL048W-A YDR090CQ03193 310 aa12.82□□□□□ -0.36
YCL048W-AYCL048W-A TRS130Q03660 1102 aa12.82□□□□□ -0.36
YCL048W-AYCL048W-A SPO12P17123 173 aa12.81□□□□□ -0.36
YCL048W-AYCL048W-A KIP1P28742 1111 aa12.81□□□□□ -0.36
YCL048W-AYCL048W-A PIN4P34217 668 aaKnown RBP RIP-Chip data12.81□□□□□ -0.36not detected
YCL048W-AYCL048W-A LDH1P38139 375 aa12.81□□□□□ -0.36
YCL048W-AYCL048W-A ALD5P40047 520 aaKnown RBP12.81□□□□□ -0.36
YCL048W-AYCL048W-A ATG3P40344 310 aa12.81□□□□□ -0.36
YCL048W-AYCL048W-A TSR1Q07381 788 aaKnown RBP12.81□□□□□ -0.36
YCL048W-AYCL048W-A MAM3Q12296 706 aa12.81□□□□□ -0.36
YCL048W-AYCL048W-A YDL206WQ12424 762 aa12.81□□□□□ -0.36
YCL048W-AYCL048W-A HEM1P09950 548 aaPredicted RBP12.8□□□□□ -0.36
YCL048W-AYCL048W-A SEC23P15303 768 aaKnown RBP12.8□□□□□ -0.36
YCL048W-AYCL048W-A TUP1P16649 713 aa12.8□□□□□ -0.36
YCL048W-AYCL048W-A SMC1P32908 1225 aa12.8□□□□□ -0.36
YCL048W-AYCL048W-A MFT1P33441 392 aaKnown RBP12.8□□□□□ -0.36
YCL048W-AYCL048W-A HXT8P40886 569 aa12.8□□□□□ -0.36
YCL048W-AYCL048W-A PDC6P26263 563 aaKnown RBP12.79□□□□□ -0.36
YCL048W-AYCL048W-A SWI3P32591 825 aa12.79□□□□□ -0.36
YCL048W-AYCL048W-A RAD54P32863 898 aa12.79□□□□□ -0.36
YCL048W-AYCL048W-A UIP5P36137 443 aa12.79□□□□□ -0.36
YCL048W-AYCL048W-A YAP1801P38856 637 aa12.79□□□□□ -0.36
YCL048W-AYCL048W-A IES1P43579 692 aa12.79□□□□□ -0.36
YCL048W-AYCL048W-A JSN1P47135 1091 aaKnown RBP RIP-Chip data12.79□□□□□ -0.36not detected
YCL048W-AYCL048W-A AZR1P50080 613 aa12.79□□□□□ -0.36
YCL048W-AYCL048W-A VPS72Q03388 795 aa12.79□□□□□ -0.36
YCL048W-AYCL048W-A GIS3Q12418 502 aa12.79□□□□□ -0.36
YCL048W-AYCL048W-A MTF2P10849 440 aa12.78□□□□□ -0.36
YCL048W-AYCL048W-A PCH2P38126 564 aa12.78□□□□□ -0.36
YCL048W-AYCL048W-A ISM1P48526 1002 aa12.78□□□□□ -0.36
YCL048W-AYCL048W-A TAD1P53065 400 aa12.78□□□□□ -0.36
YCL048W-AYCL048W-A SLX4Q12098 748 aa12.78□□□□□ -0.36
YCL048W-AYCL048W-A SNF1P06782 633 aaKnown RBP12.77□□□□□ -0.37
YCL048W-AYCL048W-A ADE2P21264 571 aaKnown RBP12.77□□□□□ -0.37
YCL048W-AYCL048W-A RRP43P25359 394 aaPredicted RBP12.77□□□□□ -0.37
YCL048W-AYCL048W-A CCC2P38995 1004 aa12.77□□□□□ -0.37
YCL048W-AYCL048W-A OSW7P43611 510 aa12.77□□□□□ -0.37
YCL048W-AYCL048W-A DAS1P47005 663 aa12.77□□□□□ -0.37
YCL048W-AYCL048W-A TPO2P53283 614 aa12.77□□□□□ -0.37
YCL048W-AYCL048W-A FMP30Q02883 468 aa12.77□□□□□ -0.37
YCL048W-AYCL048W-A IWR1Q07532 353 aaPredicted RBP12.77□□□□□ -0.37
YCL048W-AYCL048W-A SGT2Q12118 346 aaKnown RBP12.77□□□□□ -0.37
YCL048W-AYCL048W-A GLN3P18494 730 aa12.76□□□□□ -0.37
YCL048W-AYCL048W-A RPT1P33299 467 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 68.4 ms