RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeast

Gene PHO88, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO88	YBR106W	GPG1	P53130	126 aa		4.24	□□□□□ -1.73
PHO88	YBR106W	PBP1	P53297	722 aa	Known RBP	4.24	□□□□□ -1.73
PHO88	YBR106W	GUP2	Q08929	609 aa		4.24	□□□□□ -1.73
PHO88	YBR106W	YVC1	Q12324	675 aa		4.24	□□□□□ -1.73
PHO88	YBR106W	DIF1	O13577	133 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	ENA1	P13587	1091 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	SAM35	P14693	329 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	NPP1	P25353	742 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	PTH2	P34222	208 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	SAP190	P36123	1033 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	ECM21	P38167	1117 aa	Known RBP	4.23	□□□□□ -1.73
PHO88	YBR106W	SHR5	P41912	237 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	YJR096W	P47137	282 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	PSP2	P50109	593 aa	Known RBP	4.23	□□□□□ -1.73
PHO88	YBR106W	TAN1	P53072	289 aa	Predicted RBP	4.23	□□□□□ -1.73
PHO88	YBR106W	SLD3	P53135	668 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	ENA2	Q01896	1091 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	RSM24	Q03976	319 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	ATG33	Q06485	197 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	TRE1	Q08919	783 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	RMP1	Q12530	201 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	ENA5	Q12691	1091 aa		4.23	□□□□□ -1.73
PHO88	YBR106W	SPS1	P08458	490 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	HSF1	P10961	833 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	DAL7	P21826	554 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	CYS3	P31373	394 aa	Known RBP	4.22	□□□□□ -1.73
PHO88	YBR106W	COQ2	P32378	372 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	YKL133C	P36066	463 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	MAL31	P38156	614 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	SAF1	P38352	637 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	RIM4	P38741	713 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	GIC1	P38785	314 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	YAP1801	P38856	637 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	RET2	P43621	546 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	COG6	P53959	839 aa		4.22	□□□□□ -1.73
PHO88	YBR106W	CHS2	P14180	963 aa		4.21	□□□□□ -1.74
PHO88	YBR106W	TRK2	P28584	889 aa		4.21	□□□□□ -1.74
PHO88	YBR106W	TYE7	P33122	291 aa	Predicted RBP	4.21	□□□□□ -1.74
PHO88	YBR106W	TDA3	P38758	523 aa		4.21	□□□□□ -1.74
PHO88	YBR106W	SET5	P38890	526 aa	Known RBP	4.21	□□□□□ -1.74
PHO88	YBR106W	OAF1	P39720	1047 aa	Predicted RBP	4.21	□□□□□ -1.74
PHO88	YBR106W	CCT5	P40413	562 aa	Known RBP	4.21	□□□□□ -1.74
PHO88	YBR106W	YFL052W	P43551	465 aa		4.21	□□□□□ -1.74
PHO88	YBR106W	YRB30	P53107	440 aa	Predicted RBP	4.21	□□□□□ -1.74
PHO88	YBR106W	NPY1	P53164	384 aa		4.21	□□□□□ -1.74
PHO88	YBR106W	PUS2	P53167	370 aa		4.21	□□□□□ -1.74
PHO88	YBR106W	SND1	Q04007	877 aa		4.21	□□□□□ -1.74
PHO88	YBR106W	THI72	Q08579	599 aa		4.21	□□□□□ -1.74
PHO88	YBR106W	YOR378W	Q08902	515 aa		4.21	□□□□□ -1.74
PHO88	YBR106W	RRP6	Q12149	733 aa	Known RBP	4.21	□□□□□ -1.74
PHO88	YBR106W	NOT3	P06102	836 aa	Known RBP	4.2	□□□□□ -1.74
PHO88	YBR106W	ADP1	P25371	1049 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	APL1	P27351	700 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	URA1	P28272	314 aa	Predicted RBP	4.2	□□□□□ -1.74
PHO88	YBR106W	PTP2	P29461	750 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	HIR1	P32479	840 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	STE13	P33894	931 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	TAT1	P38085	619 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	NMD3	P38861	518 aa	Known RBP	4.2	□□□□□ -1.74
PHO88	YBR106W	YGR153W	P48238	217 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	RAI1	P53063	387 aa	Known RBP	4.2	□□□□□ -1.74
PHO88	YBR106W	TAD1	P53065	400 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	SPC105	P53148	917 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	GPD1	Q00055	391 aa	Known RBP	4.2	□□□□□ -1.74
PHO88	YBR106W	PTA1	Q01329	785 aa	Predicted RBP	4.2	□□□□□ -1.74
PHO88	YBR106W	YKR011C	Q02209	353 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	SKY1	Q03656	742 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	PSR2	Q07949	397 aa		4.2	□□□□□ -1.74
PHO88	YBR106W	RCL1	Q08096	367 aa	Predicted RBP	4.2	□□□□□ -1.74
PHO88	YBR106W	SST2	P11972	698 aa	Known RBP	4.19	□□□□□ -1.74
PHO88	YBR106W	AIM26	P32858	118 aa		4.19	□□□□□ -1.74
PHO88	YBR106W	WHI3	P34761	661 aa	Known RBP	4.19	□□□□□ -1.74
PHO88	YBR106W	PMC1	P38929	1173 aa	Predicted RBP	4.19	□□□□□ -1.74
PHO88	YBR106W	CEP3	P40969	608 aa		4.19	□□□□□ -1.74
PHO88	YBR106W	BNA2	P47125	453 aa		4.19	□□□□□ -1.74
PHO88	YBR106W	YJR120W	P47157	116 aa		4.19	□□□□□ -1.74
PHO88	YBR106W	SDH1	Q00711	640 aa		4.19	□□□□□ -1.74
PHO88	YBR106W	EAR1	Q03212	550 aa		4.19	□□□□□ -1.74
PHO88	YBR106W	YMR187C	Q03236	431 aa		4.19	□□□□□ -1.74
PHO88	YBR106W	ATG16	Q03818	150 aa		4.19	□□□□□ -1.74
PHO88	YBR106W	SIZ1	Q04195	904 aa		4.19	□□□□□ -1.74
PHO88	YBR106W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
PHO88	YBR106W	PRC1	P00729	532 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	NAM7	P30771	971 aa	Known RBP	4.18	□□□□□ -1.74
PHO88	YBR106W	CCR4	P31384	837 aa	Known RBP	4.18	□□□□□ -1.74
PHO88	YBR106W	PLC1	P32383	869 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	NGG1	P32494	702 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	NIC96	P34077	839 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	YKR075C	P36155	307 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	PEX7	P39108	375 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	GPP2	P40106	250 aa	Known RBP	4.18	□□□□□ -1.74
PHO88	YBR106W	NIT2	P47016	307 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	TY4A-J	P47023	414 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	HXT16	P47185	567 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	HFM1	P51979	1187 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	YGR021W	P53212	290 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	SFB2	P53953	876 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	UBX4	P54730	416 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	MSC2	Q03455	724 aa		4.18	□□□□□ -1.74
PHO88	YBR106W	YOR352W	Q08816	343 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 128.4 ms