RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W UTR2P32623 467 aa7.38□□□□□ -1.23
SWD1YAR003W RGT1P32862 1170 aa7.38□□□□□ -1.23
SWD1YAR003W RKM3P38222 552 aa7.38□□□□□ -1.23
SWD1YAR003W REG2P38232 338 aa7.38□□□□□ -1.23
SWD1YAR003W HMF1P40037 129 aaKnown RBP7.38□□□□□ -1.23
SWD1YAR003W FYV10P40492 516 aa7.38□□□□□ -1.23
SWD1YAR003W UBP15P50101 1230 aa7.38□□□□□ -1.23
SWD1YAR003W PGA2P53903 129 aa7.38□□□□□ -1.23
SWD1YAR003W DMA2P53924 522 aa7.38□□□□□ -1.23
SWD1YAR003W ADY4Q05955 493 aa7.38□□□□□ -1.23
SWD1YAR003W DUS4Q06063 367 aa7.38□□□□□ -1.23
SWD1YAR003W CRD1Q07560 283 aa7.38□□□□□ -1.23
SWD1YAR003W MET7Q08645 548 aa7.38□□□□□ -1.23
SWD1YAR003W ERP3Q12403 225 aa7.38□□□□□ -1.23
SWD1YAR003W CLN3P13365 580 aa7.37□□□□□ -1.23
SWD1YAR003W DAT1P13483 248 aaKnown RBP7.37□□□□□ -1.23
SWD1YAR003W TFC4P33339 1025 aa7.37□□□□□ -1.23
SWD1YAR003W MIC60P36112 540 aa7.37□□□□□ -1.23
SWD1YAR003W PET10P36139 283 aa7.37□□□□□ -1.23
SWD1YAR003W THI6P41835 540 aa7.37□□□□□ -1.23
SWD1YAR003W GFD1Q04839 188 aaKnown RBP7.37□□□□□ -1.23
SWD1YAR003W MSC6Q08818 692 aaKnown RBP7.37□□□□□ -1.23
SWD1YAR003W SRD1P09007 221 aa7.36□□□□□ -1.23
SWD1YAR003W GSY2P27472 705 aa7.36□□□□□ -1.23
SWD1YAR003W KNS1P32350 737 aaPredicted RBP7.36□□□□□ -1.23
SWD1YAR003W SUV3P32580 737 aa7.36□□□□□ -1.23
SWD1YAR003W MRPL10P36520 322 aa7.36□□□□□ -1.23
SWD1YAR003W TBS1P38114 1094 aa7.36□□□□□ -1.23
SWD1YAR003W SIP3P38717 1229 aa7.36□□□□□ -1.23
SWD1YAR003W RPN3P40016 523 aaKnown RBP7.36□□□□□ -1.23
SWD1YAR003W TFG2P41896 400 aaPredicted RBP7.36□□□□□ -1.23
SWD1YAR003W DUS1P53759 423 aaKnown RBP7.36□□□□□ -1.23
SWD1YAR003W SEC5P89102 971 aa7.36□□□□□ -1.23
SWD1YAR003W MRX10Q05648 414 aa7.36□□□□□ -1.23
SWD1YAR003W YLL058WQ12198 575 aa7.36□□□□□ -1.23
SWD1YAR003W WTM2Q12206 467 aa7.36□□□□□ -1.23
SWD1YAR003W ATE1P16639 503 aa7.35□□□□□ -1.23
SWD1YAR003W CDC48P25694 835 aaKnown RBP7.35□□□□□ -1.23
SWD1YAR003W ATG19P35193 415 aa7.35□□□□□ -1.23
SWD1YAR003W MXR1P40029 184 aa7.35□□□□□ -1.23
SWD1YAR003W NUP82P40368 713 aa7.35□□□□□ -1.23
SWD1YAR003W GPD2P41911 440 aaKnown RBP7.35□□□□□ -1.23
SWD1YAR003W VTC4P47075 721 aa7.35□□□□□ -1.23
SWD1YAR003W FUS2Q05670 677 aa7.35□□□□□ -1.23
SWD1YAR003W WHI4Q07655 649 aaKnown RBP7.35□□□□□ -1.23
SWD1YAR003W YEL076C-AP0CX16 216 aa7.34□□□□□ -1.23
SWD1YAR003W YLR464WP0CX17 216 aa7.34□□□□□ -1.23
SWD1YAR003W TCP1P12612 559 aaKnown RBP7.34□□□□□ -1.23
SWD1YAR003W OM45P16547 393 aa7.34□□□□□ -1.23
SWD1YAR003W PFK1P16861 987 aaKnown RBP7.34□□□□□ -1.23
SWD1YAR003W RDS2P19541 446 aaKnown RBP7.34□□□□□ -1.23
SWD1YAR003W PRE10P21242 288 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
SWD1YAR003W TIM23P32897 222 aa7.34□□□□□ -1.23
SWD1YAR003W TVP38P36164 337 aa7.34□□□□□ -1.23
SWD1YAR003W ADE17P38009 592 aaKnown RBP7.34□□□□□ -1.23
SWD1YAR003W PPS1P38148 807 aa7.34□□□□□ -1.23
SWD1YAR003W OSH7P38755 437 aa7.34□□□□□ -1.23
SWD1YAR003W PIH1P38768 344 aa7.34□□□□□ -1.23
SWD1YAR003W YEL076CP39971 216 aa7.34□□□□□ -1.23
SWD1YAR003W FIS1P40515 155 aa7.34□□□□□ -1.23
SWD1YAR003W YFL034WP43564 1073 aa7.34□□□□□ -1.23
SWD1YAR003W GUP1P53154 560 aa7.34□□□□□ -1.23
SWD1YAR003W MDR1P53258 950 aa7.34□□□□□ -1.23
SWD1YAR003W DIP5P53388 608 aa7.34□□□□□ -1.23
SWD1YAR003W SMC5Q08204 1093 aa7.34□□□□□ -1.23
SWD1YAR003W ENO1P00924 437 aaKnown RBP7.33□□□□□ -1.24
SWD1YAR003W CDC37P06101 506 aaKnown RBP7.33□□□□□ -1.24
SWD1YAR003W RPC53P25441 422 aa7.33□□□□□ -1.24
SWD1YAR003W VPS35P34110 944 aa7.33□□□□□ -1.24
SWD1YAR003W UBP11P36026 717 aa7.33□□□□□ -1.24
SWD1YAR003W YIR007WP40566 764 aa7.33□□□□□ -1.24
SWD1YAR003W NCS6P53088 359 aa7.33□□□□□ -1.24
SWD1YAR003W SPP382Q06411 708 aaPredicted RBP7.33□□□□□ -1.24
SWD1YAR003W HDA3Q06623 655 aa7.33□□□□□ -1.24
SWD1YAR003W AFT2Q08957 416 aa7.33□□□□□ -1.24
SWD1YAR003W ICL2Q12031 575 aa7.33□□□□□ -1.24
SWD1YAR003W TRM11Q12463 433 aa7.33□□□□□ -1.24
SWD1YAR003W DBP5P20449 482 aaKnown RBP7.32□□□□□ -1.24
SWD1YAR003W ISY1P21374 235 aaPredicted RBP7.32□□□□□ -1.24
SWD1YAR003W PRP22P24384 1145 aaKnown RBP7.32□□□□□ -1.24
SWD1YAR003W DAL1P32375 460 aa7.32□□□□□ -1.24
SWD1YAR003W YKL091CP33324 310 aaKnown RBP7.32□□□□□ -1.24
SWD1YAR003W SAP190P36123 1033 aa7.32□□□□□ -1.24
SWD1YAR003W GPT2P36148 743 aa7.32□□□□□ -1.24
SWD1YAR003W BCD1P38772 366 aa7.32□□□□□ -1.24
SWD1YAR003W YEL025CP39991 1188 aa7.32□□□□□ -1.24
SWD1YAR003W PSF2P40359 213 aa7.32□□□□□ -1.24
SWD1YAR003W YGL039WP53183 348 aaKnown RBP7.32□□□□□ -1.24
SWD1YAR003W NCS2P53923 493 aaPredicted RBP7.32□□□□□ -1.24
SWD1YAR003W GPI13Q07830 1017 aa7.32□□□□□ -1.24
SWD1YAR003W PCK1P10963 549 aa7.31□□□□□ -1.24
SWD1YAR003W UBP13P38187 747 aa7.31□□□□□ -1.24
SWD1YAR003W SPT8P38915 602 aa7.31□□□□□ -1.24
SWD1YAR003W PSP2P50109 593 aaKnown RBP7.31□□□□□ -1.24
SWD1YAR003W FKS1P38631 1876 aaKnown RBP7.3□□□□□ -1.24
SWD1YAR003W MRC1P25588 1096 aa7.3□□□□□ -1.24
SWD1YAR003W YUR1P26725 428 aa7.3□□□□□ -1.24
SWD1YAR003W PSO2P30620 661 aa7.3□□□□□ -1.24
SWD1YAR003W DBP7P36120 742 aaKnown RBP7.3□□□□□ -1.24
SWD1YAR003W SLX8P40072 274 aa7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms