RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 PRIM1P49642 420 aaKnown RBP13.07□□□□□ -0.32
COL2A1-208ENST00000493991 SDF4Q9BRK5 362 aa13.07□□□□□ -0.32
COL2A1-208ENST00000493991 LRRC7Q96NW7 1537 aa13.07□□□□□ -0.32
COL2A1-208ENST00000493991 SLFNL1Q499Z3 407 aa13.07□□□□□ -0.32
COL2A1-208ENST00000493991 ARHGEF10O15013 1369 aa13.07□□□□□ -0.32
COL2A1-208ENST00000493991 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
COL2A1-208ENST00000493991 CSPP1Q1MSJ5 1256 aa13.06□□□□□ -0.32
COL2A1-208ENST00000493991 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
COL2A1-208ENST00000493991 RASSF8Q8NHQ8 419 aa13.06□□□□□ -0.32
COL2A1-208ENST00000493991 NUP133Q8WUM0 1156 aa13.06□□□□□ -0.32
COL2A1-208ENST00000493991 HIP1O00291 1037 aa13.06□□□□□ -0.32
COL2A1-208ENST00000493991 ALDH1L1O75891 902 aa13.06□□□□□ -0.32
COL2A1-208ENST00000493991 SNX21Q969T3 373 aa13.06□□□□□ -0.32
COL2A1-208ENST00000493991 FAM182BQ5T319 152 aa13.06□□□□□ -0.32
COL2A1-208ENST00000493991 MROH2AA6NES4 1674 aa13.06□□□□□ -0.32
COL2A1-208ENST00000493991 PHKG2P15735 406 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 PTH1RQ03431 593 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 GCKRQ14397 625 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 RAB3GAP1Q15042 981 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 KIF3AQ9Y496 699 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 SPDYE4A6NLX3 237 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 G3V3G9 751 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 HCLS1P14317 486 aaPredicted RBP13.05□□□□□ -0.32
COL2A1-208ENST00000493991 ME1P48163 572 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 SYNE3Q6ZMZ3 975 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 RASEFQ8IZ41 740 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 C17orf53Q8N3J3 647 aaPredicted RBP13.05□□□□□ -0.32
COL2A1-208ENST00000493991 LRP2BPQ9P2M1 347 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 USP25Q9UHP3 1055 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 LMTK2Q8IWU2 1503 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 CAMSAP1Q5T5Y3 1602 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 MINDY4BA8MYZ0 360 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 STX6O43752 255 aa13.05□□□□□ -0.32
COL2A1-208ENST00000493991 GOLGA6L19H0YKK7 550 aa13.04□□□□□ -0.32
COL2A1-208ENST00000493991 MBD3O95983 291 aa13.04□□□□□ -0.32
COL2A1-208ENST00000493991 DNM1Q05193 864 aaKnown RBP13.04□□□□□ -0.32
COL2A1-208ENST00000493991 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
COL2A1-208ENST00000493991 RXRAP19793 462 aa13.04□□□□□ -0.32
COL2A1-208ENST00000493991 LRRFIP1Q32MZ4 808 aaKnown RBP13.04□□□□□ -0.32
COL2A1-208ENST00000493991 GIMAP6Q6P9H5 292 aa13.04□□□□□ -0.32
COL2A1-208ENST00000493991 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
COL2A1-208ENST00000493991 TSPY26PQ9H489 355 aa13.04□□□□□ -0.32
COL2A1-208ENST00000493991 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
COL2A1-208ENST00000493991 ZSCAN23Q3MJ62 389 aa13.04□□□□□ -0.32
COL2A1-208ENST00000493991 CPLX2Q6PUV4 134 aaKnown RBP13.04□□□□□ -0.32
COL2A1-208ENST00000493991 RAI14Q9P0K7 980 aa13.04□□□□□ -0.32
COL2A1-208ENST00000493991 CPSF1Q10570 1443 aaKnown RBP13.04□□□□□ -0.32
COL2A1-208ENST00000493991 ZNF335Q9H4Z2 1342 aaPredicted RBP13.04□□□□□ -0.32
COL2A1-208ENST00000493991 AKAP17AQ02040 695 aaKnown RBP13.03□□□□□ -0.32
COL2A1-208ENST00000493991 SPATA32Q96LK8 384 aa13.03□□□□□ -0.32
COL2A1-208ENST00000493991 ERBB3P21860 1342 aa13.03□□□□□ -0.32
COL2A1-208ENST00000493991 CHGBP05060 677 aa13.03□□□□□ -0.32
COL2A1-208ENST00000493991 KRT85P78386 507 aa13.03□□□□□ -0.32
COL2A1-208ENST00000493991 C8orf37Q96NL8 207 aa13.03□□□□□ -0.32
COL2A1-208ENST00000493991 SASS6Q6UVJ0 657 aa13.03□□□□□ -0.32
COL2A1-208ENST00000493991 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
COL2A1-208ENST00000493991 PDCL3Q9H2J4 239 aa13.03□□□□□ -0.32
COL2A1-208ENST00000493991 CCDC39Q9UFE4 941 aa13.03□□□□□ -0.32
COL2A1-208ENST00000493991 ADAMTS13Q76LX8 1427 aa13.02□□□□□ -0.32
COL2A1-208ENST00000493991 NEURL1BA8MQ27 555 aa13.02□□□□□ -0.32
COL2A1-208ENST00000493991 CYP27B1O15528 508 aa13.02□□□□□ -0.32
COL2A1-208ENST00000493991 POLR3DP05423 398 aaPredicted RBP13.02□□□□□ -0.32
COL2A1-208ENST00000493991 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.32
COL2A1-208ENST00000493991 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.32
COL2A1-208ENST00000493991 CCDC73Q6ZRK6 1079 aa13.02□□□□□ -0.32
COL2A1-208ENST00000493991 PTPRUQ92729 1446 aa13.02□□□□□ -0.32
COL2A1-208ENST00000493991 CDK12Q9NYV4 1490 aaPredicted RBP13.02□□□□□ -0.32
COL2A1-208ENST00000493991 SGSM2O43147 1006 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 DHX16O60231 1041 aaKnown RBP13.02□□□□□ -0.33
COL2A1-208ENST00000493991 TDO2P48775 406 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 CREB3L3Q68CJ9 461 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 USP48Q86UV5 1035 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 SNX14Q9Y5W7 946 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 MROH1Q8NDA8 1641 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 ATP6V1AP38606 617 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 TRIM29Q14134 588 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 ADCK5Q3MIX3 580 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 SYNE4Q8N205 404 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 AIDAQ96BJ3 306 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 RBSNQ9H1K0 784 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 TTC12Q9H892 705 aaPredicted RBP13.02□□□□□ -0.33
COL2A1-208ENST00000493991 IQGAP1P46940 1657 aa13.02□□□□□ -0.33
COL2A1-208ENST00000493991 PES1O00541 588 aaKnown RBP13.01□□□□□ -0.33
COL2A1-208ENST00000493991 PDCP20941 246 aa13.01□□□□□ -0.33
COL2A1-208ENST00000493991 NEK1Q96PY6 1258 aa13.01□□□□□ -0.33
COL2A1-208ENST00000493991 PUS3Q9BZE2 481 aaKnown RBP13.01□□□□□ -0.33
COL2A1-208ENST00000493991 A0A0D9SFI3 127 aa13.01□□□□□ -0.33
COL2A1-208ENST00000493991 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
COL2A1-208ENST00000493991 ISM2Q6H9L7 571 aa13.01□□□□□ -0.33
COL2A1-208ENST00000493991 TRIM5Q9C035 493 aa13.01□□□□□ -0.33
COL2A1-208ENST00000493991 WWC3Q9ULE0 1092 aa13.01□□□□□ -0.33
COL2A1-208ENST00000493991 CLTCQ00610 1675 aaKnown RBP13.01□□□□□ -0.33
COL2A1-208ENST00000493991 ZBTB9Q96C00 473 aa13.01□□□□□ -0.33
COL2A1-208ENST00000493991 NRXN1Q9ULB1 1477 aa13.01□□□□□ -0.33
COL2A1-208ENST00000493991 SNAP23O00161 211 aa13□□□□□ -0.33
COL2A1-208ENST00000493991 TAF5LO75529 589 aa13□□□□□ -0.33
COL2A1-208ENST00000493991 STK38Q15208 465 aa13□□□□□ -0.33
COL2A1-208ENST00000493991 MICU3Q86XE3 530 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms