RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 NPHP3Q7Z494 1330 aa6.65□□□□□ -1.35
LRCH3-214ENST00000473177 GLI3P10071 1580 aa6.65□□□□□ -1.35
LRCH3-214ENST00000473177 TMEM131LA2VDJ0 1609 aa6.65□□□□□ -1.35
LRCH3-214ENST00000473177 C1QTNF8P60827 252 aa6.64□□□□□ -1.35
LRCH3-214ENST00000473177 SRPK2P78362 688 aaKnown RBP6.64□□□□□ -1.35
LRCH3-214ENST00000473177 DHX9Q08211 1270 aaKnown RBP6.64□□□□□ -1.35
LRCH3-214ENST00000473177 TSGA10IPQ3SY00 556 aa6.64□□□□□ -1.35
LRCH3-214ENST00000473177 ZNF784Q8NCA9 323 aaPredicted RBP6.64□□□□□ -1.35
LRCH3-214ENST00000473177 PBXIP1Q96AQ6 731 aa6.64□□□□□ -1.35
LRCH3-214ENST00000473177 TOR4AQ9NXH8 423 aa6.64□□□□□ -1.35
LRCH3-214ENST00000473177 DOLKQ9UPQ8 538 aa6.64□□□□□ -1.35
LRCH3-214ENST00000473177 FANCIQ9NVI1 1328 aa6.64□□□□□ -1.35
LRCH3-214ENST00000473177 ANKRD30AQ9BXX3 1397 aa6.64□□□□□ -1.35
LRCH3-214ENST00000473177 COL22A1Q8NFW1 1626 aaPredicted RBP6.64□□□□□ -1.35
LRCH3-214ENST00000473177 ERVH48-1M5A8F1 160 aa6.63□□□□□ -1.35
LRCH3-214ENST00000473177 ALDH1A1P00352 501 aa6.63□□□□□ -1.35
LRCH3-214ENST00000473177 RFX1P22670 979 aa6.63□□□□□ -1.35
LRCH3-214ENST00000473177 XPCQ01831 940 aaPredicted RBP6.63□□□□□ -1.35
LRCH3-214ENST00000473177 NCOA4Q13772 614 aa6.63□□□□□ -1.35
LRCH3-214ENST00000473177 CCDC116Q8IYX3 515 aa6.63□□□□□ -1.35
LRCH3-214ENST00000473177 XRN1Q8IZH2 1706 aaKnown RBP6.63□□□□□ -1.35
LRCH3-214ENST00000473177 CYP4X1Q8N118 509 aa6.63□□□□□ -1.35
LRCH3-214ENST00000473177 PCDHB11Q9Y5F2 797 aa6.63□□□□□ -1.35
LRCH3-214ENST00000473177 SLIT2O94813 1529 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 ABCC5O15440 1437 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 LRPPRCP42704 1394 aaKnown RBP6.62□□□□□ -1.35
LRCH3-214ENST00000473177 NINLQ9Y2I6 1382 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 TTC24A2A3L6 582 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-214ENST00000473177 TNFRSF10AO00220 468 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 DGAT1O75907 488 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 NR3C2P08235 984 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 VPS72Q15906 364 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 EZH2Q15910 746 aaKnown RBP6.62□□□□□ -1.35
LRCH3-214ENST00000473177 EML3Q32P44 896 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 ZNF326Q5BKZ1 582 aaKnown RBP6.62□□□□□ -1.35
LRCH3-214ENST00000473177 ESCO1Q5FWF5 840 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 KANK4Q5T7N3 995 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-214ENST00000473177 DEPDC4Q8N2C3 294 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 ARXQ96QS3 562 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 SPON1Q9HCB6 807 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 WASF2Q9Y6W5 498 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 NALCNQ8IZF0 1738 aa6.62□□□□□ -1.35
LRCH3-214ENST00000473177 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.62□□□□□ -1.35
LRCH3-214ENST00000473177 LAMC1P11047 1609 aa6.61□□□□□ -1.35
LRCH3-214ENST00000473177 DAPK1P53355 1430 aa6.61□□□□□ -1.35
LRCH3-214ENST00000473177 METP08581 1390 aa6.61□□□□□ -1.35
LRCH3-214ENST00000473177 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-214ENST00000473177 RAB15P59190 212 aa6.61□□□□□ -1.35
LRCH3-214ENST00000473177 USP4Q13107 963 aa6.61□□□□□ -1.35
LRCH3-214ENST00000473177 NBPF8Q3BBV2 869 aa6.61□□□□□ -1.35
LRCH3-214ENST00000473177 PPP1R26Q5T8A7 1209 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-214ENST00000473177 SIRT1Q96EB6 747 aa6.61□□□□□ -1.35
LRCH3-214ENST00000473177 CDCA7Q9BWT1 371 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-214ENST00000473177 BCL11AQ9H165 835 aa6.61□□□□□ -1.35
LRCH3-214ENST00000473177 VRTNQ9H8Y1 702 aa6.61□□□□□ -1.35
LRCH3-214ENST00000473177 EP400Q96L91 3159 aa6.61□□□□□ -1.35
LRCH3-214ENST00000473177 ADGRB2O60241 1585 aa6.61□□□□□ -1.35
LRCH3-214ENST00000473177 ATP5J2-PTCD1G3V325 749 aa6.6□□□□□ -1.35
LRCH3-214ENST00000473177 J3QL48 77 aa6.6□□□□□ -1.35
LRCH3-214ENST00000473177 FOXO3O43524 673 aa6.6□□□□□ -1.35
LRCH3-214ENST00000473177 ERVK-9P63128 1117 aa6.6□□□□□ -1.35
LRCH3-214ENST00000473177 NNTQ13423 1086 aa6.6□□□□□ -1.35
LRCH3-214ENST00000473177 OXLD1Q5BKU9 147 aa6.6□□□□□ -1.35
LRCH3-214ENST00000473177 MKRN1Q9UHC7 482 aaKnown RBP6.6□□□□□ -1.35
LRCH3-214ENST00000473177 NOD1Q9Y239 953 aa6.6□□□□□ -1.35
LRCH3-214ENST00000473177 RBM19Q9Y4C8 960 aaKnown RBP6.6□□□□□ -1.35
LRCH3-214ENST00000473177 EMILIN1Q9Y6C2 1016 aa6.6□□□□□ -1.35
LRCH3-214ENST00000473177 CROCC2H7BZ55 1655 aa6.6□□□□□ -1.35
LRCH3-214ENST00000473177 ADGRL2O95490 1459 aa6.6□□□□□ -1.35
LRCH3-214ENST00000473177 DISP2A7MBM2 1401 aa6.59□□□□□ -1.35
LRCH3-214ENST00000473177 FAM187AA6NFU0 413 aa6.59□□□□□ -1.35
LRCH3-214ENST00000473177 KCNQ2O43526 872 aa6.59□□□□□ -1.35
LRCH3-214ENST00000473177 SMPD1P17405 629 aa6.59□□□□□ -1.35
LRCH3-214ENST00000473177 FAM182BQ5T319 152 aa6.59□□□□□ -1.35
LRCH3-214ENST00000473177 CC2D2BQ6DHV5 1058 aa6.59□□□□□ -1.35
LRCH3-214ENST00000473177 TRIM50Q86XT4 487 aa6.59□□□□□ -1.35
LRCH3-214ENST00000473177 TMPRSS4Q9NRS4 437 aa6.59□□□□□ -1.35
LRCH3-214ENST00000473177 PGPEP1Q9NXJ5 209 aa6.59□□□□□ -1.35
LRCH3-214ENST00000473177 MYO5BQ9ULV0 1848 aa6.59□□□□□ -1.35
LRCH3-214ENST00000473177 PXDNQ92626 1479 aa6.59□□□□□ -1.36
LRCH3-214ENST00000473177 PARD3Q8TEW0 1356 aa6.58□□□□□ -1.36
LRCH3-214ENST00000473177 USP32Q8NFA0 1604 aa6.58□□□□□ -1.36
LRCH3-214ENST00000473177 PTPN23Q9H3S7 1636 aa6.58□□□□□ -1.36
LRCH3-214ENST00000473177 LILRA1O75019 489 aa6.58□□□□□ -1.36
LRCH3-214ENST00000473177 ATG7O95352 703 aa6.58□□□□□ -1.36
LRCH3-214ENST00000473177 APBA3O96018 575 aa6.58□□□□□ -1.36
LRCH3-214ENST00000473177 MYCP01106 439 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-214ENST00000473177 SCTRP47872 440 aa6.58□□□□□ -1.36
LRCH3-214ENST00000473177 KLF16Q9BXK1 252 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-214ENST00000473177 RGPD1P0DJD0 1748 aa6.58□□□□□ -1.36
LRCH3-214ENST00000473177 BRWD3Q6RI45 1802 aa6.57□□□□□ -1.36
LRCH3-214ENST00000473177 MARF1Q9Y4F3 1742 aaKnown RBP6.57□□□□□ -1.36
LRCH3-214ENST00000473177 FAM196BA6NMK8 535 aa6.57□□□□□ -1.36
LRCH3-214ENST00000473177 TRIM37O94972 964 aa6.57□□□□□ -1.36
LRCH3-214ENST00000473177 RASA1P20936 1047 aa6.57□□□□□ -1.36
LRCH3-214ENST00000473177 ATP1A2P50993 1020 aa6.57□□□□□ -1.36
LRCH3-214ENST00000473177 ZNF775Q96BV0 537 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-214ENST00000473177 CYLDQ9NQC7 956 aa6.57□□□□□ -1.36
LRCH3-214ENST00000473177 ANKRD50Q9ULJ7 1429 aa6.57□□□□□ -1.36
LRCH3-214ENST00000473177 NRXN3Q9Y4C0 1643 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms