RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W ACE2P21192 770 aa5.05□□□□□ -1.6
HSH49YOR319W SRM1P21827 482 aa5.05□□□□□ -1.6
HSH49YOR319W RPL8BP29453 256 aaKnown RBP5.05□□□□□ -1.6
HSH49YOR319W ABD1P32783 436 aaPredicted RBP5.05□□□□□ -1.6
HSH49YOR319W SLA2P33338 968 aa5.05□□□□□ -1.6
HSH49YOR319W VBA5P36172 582 aa5.05□□□□□ -1.6
HSH49YOR319W PBY1P38254 753 aa5.05□□□□□ -1.6
HSH49YOR319W YJR142WP47173 342 aa5.05□□□□□ -1.6
HSH49YOR319W PBP1P53297 722 aaKnown RBP5.05□□□□□ -1.6
HSH49YOR319W RIB2Q12362 591 aaKnown RBP5.05□□□□□ -1.6
HSH49YOR319W CIT1P00890 479 aa5.04□□□□□ -1.6
HSH49YOR319W PRP9P19736 530 aaKnown RBP5.04□□□□□ -1.6
HSH49YOR319W THI4P32318 326 aa5.04□□□□□ -1.6
HSH49YOR319W PFD1P46988 109 aa5.04□□□□□ -1.6
HSH49YOR319W SIZ1Q04195 904 aa5.04□□□□□ -1.6
HSH49YOR319W YLR225CQ05948 407 aaKnown RBP5.04□□□□□ -1.6
HSH49YOR319W DUS4Q06063 367 aa5.04□□□□□ -1.6
HSH49YOR319W RXT3Q07458 294 aa5.04□□□□□ -1.6
HSH49YOR319W YPL066WQ12194 479 aa5.04□□□□□ -1.6
HSH49YOR319W TAD3Q9URQ3 322 aa5.04□□□□□ -1.6
HSH49YOR319W CAN1P04817 590 aa5.03□□□□□ -1.6
HSH49YOR319W SSB1P11484 613 aaKnown RBP5.03□□□□□ -1.6
HSH49YOR319W SSB2P40150 613 aaKnown RBP5.03□□□□□ -1.6
HSH49YOR319W HUL4P40985 892 aa5.03□□□□□ -1.6
HSH49YOR319W ESC2Q06340 456 aa5.03□□□□□ -1.6
HSH49YOR319W ERR1P0CX10 437 aa5.02□□□□□ -1.61
HSH49YOR319W ERR2P0CX11 437 aa5.02□□□□□ -1.61
HSH49YOR319W ARE1P25628 610 aa5.02□□□□□ -1.61
HSH49YOR319W SCT1P32784 759 aa5.02□□□□□ -1.61
HSH49YOR319W DOM34P33309 386 aa5.02□□□□□ -1.61
HSH49YOR319W TRM2P33753 639 aa5.02□□□□□ -1.61
HSH49YOR319W PIN4P34217 668 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
HSH49YOR319W TOM20P35180 183 aa5.02□□□□□ -1.61
HSH49YOR319W UTP8P53276 713 aaKnown RBP5.02□□□□□ -1.61
HSH49YOR319W MSC2Q03455 724 aa5.02□□□□□ -1.61
HSH49YOR319W EAF1Q06337 982 aa5.02□□□□□ -1.61
HSH49YOR319W GPB1Q08886 897 aa5.02□□□□□ -1.61
HSH49YOR319W GRX4P32642 244 aa5.01□□□□□ -1.61
HSH49YOR319W SIP5P40210 489 aaKnown RBP5.01□□□□□ -1.61
HSH49YOR319W HFM1P51979 1187 aa5.01□□□□□ -1.61
HSH49YOR319W GTF1P53260 183 aaPredicted RBP5.01□□□□□ -1.61
HSH49YOR319W TAF8Q03750 510 aa5.01□□□□□ -1.61
HSH49YOR319W UBX5Q06682 500 aa5.01□□□□□ -1.61
HSH49YOR319W ACK1Q07622 623 aaPredicted RBP5.01□□□□□ -1.61
HSH49YOR319W NOP14Q99207 810 aaKnown RBP5.01□□□□□ -1.61
HSH49YOR319W TOP1P04786 769 aa5□□□□□ -1.61
HSH49YOR319W CDC20P26309 610 aa5□□□□□ -1.61
HSH49YOR319W YDL124WQ07551 312 aaKnown RBP5□□□□□ -1.61
HSH49YOR319W MSH2P25847 964 aa4.99□□□□□ -1.61
HSH49YOR319W ALR2P43553 858 aa4.99□□□□□ -1.61
HSH49YOR319W PUS9Q12069 462 aa4.99□□□□□ -1.61
HSH49YOR319W OSW2Q12202 724 aa4.99□□□□□ -1.61
HSH49YOR319W UBP12P39538 1254 aa4.98□□□□□ -1.61
HSH49YOR319W YJR008WP47085 338 aa4.98□□□□□ -1.61
HSH49YOR319W RTA1P53047 317 aa4.98□□□□□ -1.61
HSH49YOR319W MTC3P53077 123 aa4.98□□□□□ -1.61
HSH49YOR319W TPO2P53283 614 aa4.98□□□□□ -1.61
HSH49YOR319W YLL058WQ12198 575 aa4.98□□□□□ -1.61
HSH49YOR319W CDC6P09119 513 aa4.97□□□□□ -1.61
HSH49YOR319W CRP1P38845 465 aaKnown RBP4.97□□□□□ -1.61
HSH49YOR319W MSE1P48525 536 aa4.97□□□□□ -1.61
HSH49YOR319W GCV2P49095 1034 aa4.97□□□□□ -1.61
HSH49YOR319W VPS62P53285 467 aa4.97□□□□□ -1.61
HSH49YOR319W RTS3P53289 263 aa4.97□□□□□ -1.61
HSH49YOR319W NTG2Q08214 380 aa4.97□□□□□ -1.61
HSH49YOR319W ENA1P13587 1091 aa4.96□□□□□ -1.62
HSH49YOR319W HCM1P25364 564 aa4.96□□□□□ -1.62
HSH49YOR319W EMC1P25574 760 aa4.96□□□□□ -1.62
HSH49YOR319W BET3P36149 193 aa4.96□□□□□ -1.62
HSH49YOR319W YAP1801P38856 637 aa4.96□□□□□ -1.62
HSH49YOR319W SAH1P39954 449 aaKnown RBP4.96□□□□□ -1.62
HSH49YOR319W ZRG8P40021 1076 aa4.96□□□□□ -1.62
HSH49YOR319W MND2P40577 368 aa4.96□□□□□ -1.62
HSH49YOR319W ATG36P46983 293 aa4.96□□□□□ -1.62
HSH49YOR319W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62 RIP-Chip
HSH49YOR319W ENA2Q01896 1091 aa4.96□□□□□ -1.62
HSH49YOR319W UGO1Q03327 502 aa4.96□□□□□ -1.62
HSH49YOR319W YAP6Q03935 383 aa4.96□□□□□ -1.62
HSH49YOR319W HRQ1Q05549 1077 aa4.96□□□□□ -1.62
HSH49YOR319W TMA10Q06177 86 aa4.96□□□□□ -1.62
HSH49YOR319W MDM38Q08179 573 aa4.96□□□□□ -1.62
HSH49YOR319W HMI1Q12039 706 aa4.96□□□□□ -1.62
HSH49YOR319W ENA5Q12691 1091 aa4.96□□□□□ -1.62
HSH49YOR319W STE11P23561 717 aa4.95□□□□□ -1.62
HSH49YOR319W SFP1P32432 683 aa4.95□□□□□ -1.62
HSH49YOR319W CDC11P32458 415 aa4.95□□□□□ -1.62
HSH49YOR319W YKL151CP36059 337 aa4.95□□□□□ -1.62
HSH49YOR319W POA1P38218 177 aa4.95□□□□□ -1.62
HSH49YOR319W CCC2P38995 1004 aa4.95□□□□□ -1.62
HSH49YOR319W MBP1P39678 833 aa4.95□□□□□ -1.62
HSH49YOR319W MNN10P50108 393 aaKnown RBP4.95□□□□□ -1.62
HSH49YOR319W MCM6P53091 1017 aaKnown RBP4.95□□□□□ -1.62
HSH49YOR319W DNM1P54861 757 aa4.95□□□□□ -1.62
HSH49YOR319W SRP1Q02821 542 aaKnown RBP4.95□□□□□ -1.62
HSH49YOR319W TPO1Q07824 586 aa4.95□□□□□ -1.62
HSH49YOR319W XYL2Q07993 356 aa4.95□□□□□ -1.62
HSH49YOR319W RPP2AP05319 106 aaKnown RBP4.94□□□□□ -1.62
HSH49YOR319W LST4P34239 828 aa4.94□□□□□ -1.62
HSH49YOR319W YEN1P40028 759 aa4.94□□□□□ -1.62
HSH49YOR319W HSV2P50079 448 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 69.1 ms