RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W ERF2Q06551 359 aa5.74□□□□□ -1.49
SPG4YMR107W BDF2Q07442 638 aa5.74□□□□□ -1.49
SPG4YMR107W ALR1Q08269 859 aa5.74□□□□□ -1.49
SPG4YMR107W PPM2Q08282 695 aa5.74□□□□□ -1.49
SPG4YMR107W ALE1Q08548 619 aa5.74□□□□□ -1.49
SPG4YMR107W DAS2Q12084 232 aa5.74□□□□□ -1.49
SPG4YMR107W TY4A-HQ6Q5P6 413 aa5.74□□□□□ -1.49
SPG4YMR107W TY1B-AO13527 1196 aaKnown RBP5.73□□□□□ -1.49
SPG4YMR107W ENO2P00925 437 aaKnown RBP5.73□□□□□ -1.49
SPG4YMR107W CLN3P13365 580 aa5.73□□□□□ -1.49
SPG4YMR107W SNA3P14359 133 aa5.73□□□□□ -1.49
SPG4YMR107W ARG8P18544 423 aa5.73□□□□□ -1.49
SPG4YMR107W PRP4P20053 465 aaKnown RBP5.73□□□□□ -1.49
SPG4YMR107W SRB4P32569 687 aa5.73□□□□□ -1.49
SPG4YMR107W FRD1P32614 470 aaKnown RBP5.73□□□□□ -1.49
SPG4YMR107W ATO2P32907 282 aa5.73□□□□□ -1.49
SPG4YMR107W LAM1P38851 1228 aa5.73□□□□□ -1.49
SPG4YMR107W CRG1P38892 291 aaRIP-Chip data5.73□□□□□ -1.49not detected
SPG4YMR107W HAL5P38970 855 aaKnown RBP5.73□□□□□ -1.49
SPG4YMR107W AIM20P40451 204 aa5.73□□□□□ -1.49
SPG4YMR107W GCN20P43535 752 aaKnown RBP5.73□□□□□ -1.49
SPG4YMR107W DAK2P43550 591 aa5.73□□□□□ -1.49
SPG4YMR107W IES1P43579 692 aa5.73□□□□□ -1.49
SPG4YMR107W CCM1P48237 864 aaPredicted RBP5.73□□□□□ -1.49
SPG4YMR107W YNL193WP53870 558 aa5.73□□□□□ -1.49
SPG4YMR107W YOR389WQ08912 624 aa5.73□□□□□ -1.49
SPG4YMR107W NUC1P08466 329 aa5.72□□□□□ -1.49
SPG4YMR107W NAT1P12945 854 aaKnown RBP5.72□□□□□ -1.49
SPG4YMR107W GFA1P14742 717 aaKnown RBP5.72□□□□□ -1.49
SPG4YMR107W TAL1P15019 335 aaKnown RBP5.72□□□□□ -1.49
SPG4YMR107W CDC11P32458 415 aa5.72□□□□□ -1.49
SPG4YMR107W APL2P36000 726 aaPredicted RBP5.72□□□□□ -1.49
SPG4YMR107W SPL2P38839 148 aa5.72□□□□□ -1.49
SPG4YMR107W CCT2P39076 527 aaKnown RBP5.72□□□□□ -1.49
SPG4YMR107W NUP60P39705 539 aa5.72□□□□□ -1.49
SPG4YMR107W ATG32P40458 529 aa5.72□□□□□ -1.49
SPG4YMR107W GVP36P40531 326 aaKnown RBP5.72□□□□□ -1.49
SPG4YMR107W MAD1P40957 749 aa5.72□□□□□ -1.49
SPG4YMR107W ERP6P53198 216 aa5.72□□□□□ -1.49
SPG4YMR107W YNL247WP53852 767 aaKnown RBP5.72□□□□□ -1.49
SPG4YMR107W NOP15P53927 220 aaPredicted RBP5.72□□□□□ -1.49
SPG4YMR107W GTR1Q00582 310 aa5.72□□□□□ -1.49
SPG4YMR107W FMP30Q02883 468 aa5.72□□□□□ -1.49
SPG4YMR107W FCP1Q03254 732 aa5.72□□□□□ -1.49
SPG4YMR107W ECI1Q05871 280 aa5.72□□□□□ -1.49
SPG4YMR107W MRD1Q06106 887 aaKnown RBP5.72□□□□□ -1.49
SPG4YMR107W YOR296WQ08748 1289 aa5.72□□□□□ -1.49
SPG4YMR107W TUS1Q06412 1307 aa5.72□□□□□ -1.49
SPG4YMR107W CHO2P05374 869 aaKnown RBP5.71□□□□□ -1.5
SPG4YMR107W CDC37P06101 506 aaKnown RBP5.71□□□□□ -1.5
SPG4YMR107W PFK2P16862 959 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
SPG4YMR107W SDH2P21801 266 aa5.71□□□□□ -1.5
SPG4YMR107W UBP1P25037 809 aa5.71□□□□□ -1.5
SPG4YMR107W STE13P33894 931 aa5.71□□□□□ -1.5
SPG4YMR107W VPS35P34110 944 aa5.71□□□□□ -1.5
SPG4YMR107W BMH2P34730 273 aaKnown RBP5.71□□□□□ -1.5
SPG4YMR107W RER2P35196 286 aa5.71□□□□□ -1.5
SPG4YMR107W RPC25P35718 212 aa5.71□□□□□ -1.5
SPG4YMR107W SPP381P38282 291 aaPredicted RBP5.71□□□□□ -1.5
SPG4YMR107W FYV8P46949 817 aaKnown RBP5.71□□□□□ -1.5
SPG4YMR107W NMD5P46970 1048 aa5.71□□□□□ -1.5
SPG4YMR107W URB2P47108 1174 aa5.71□□□□□ -1.5
SPG4YMR107W ENP2P48234 707 aaKnown RBP5.71□□□□□ -1.5
SPG4YMR107W ATP25Q03153 612 aa5.71□□□□□ -1.5
SPG4YMR107W MTC5Q03897 1148 aa5.71□□□□□ -1.5
SPG4YMR107W YDR179W-AQ03983 463 aa5.71□□□□□ -1.5
SPG4YMR107W SXM1Q04175 944 aaKnown RBP5.71□□□□□ -1.5
SPG4YMR107W UTP5Q04177 643 aaKnown RBP5.71□□□□□ -1.5
SPG4YMR107W KRE28Q04431 385 aa5.71□□□□□ -1.5
SPG4YMR107W ITT1Q04638 464 aa5.71□□□□□ -1.5
SPG4YMR107W SLM3Q12093 417 aa5.71□□□□□ -1.5
SPG4YMR107W GET4Q12125 312 aa5.71□□□□□ -1.5
SPG4YMR107W AIM7Q12156 149 aa5.71□□□□□ -1.5
SPG4YMR107W ADR1P07248 1323 aa5.71□□□□□ -1.5
SPG4YMR107W SUP45P12385 437 aaKnown RBP5.7□□□□□ -1.5
SPG4YMR107W TYR1P20049 452 aa5.7□□□□□ -1.5
SPG4YMR107W CLN1P20437 546 aa5.7□□□□□ -1.5
SPG4YMR107W SIT4P20604 311 aa5.7□□□□□ -1.5
SPG4YMR107W ADY2P25613 283 aa5.7□□□□□ -1.5
SPG4YMR107W SAC6P32599 642 aaKnown RBP5.7□□□□□ -1.5
SPG4YMR107W CSE1P33307 960 aa5.7□□□□□ -1.5
SPG4YMR107W UBP5P39944 805 aa5.7□□□□□ -1.5
SPG4YMR107W YMR147WP40218 223 aaKnown RBP5.7□□□□□ -1.5
SPG4YMR107W THI6P41835 540 aa5.7□□□□□ -1.5
SPG4YMR107W SPR3P41901 512 aa5.7□□□□□ -1.5
SPG4YMR107W YRB1P41920 201 aaKnown RBP5.7□□□□□ -1.5
SPG4YMR107W STB1P42845 420 aa5.7□□□□□ -1.5
SPG4YMR107W VTC2P43585 828 aa5.7□□□□□ -1.5
SPG4YMR107W FPK1P53739 893 aa5.7□□□□□ -1.5
SPG4YMR107W RSM24Q03976 319 aa5.7□□□□□ -1.5
SPG4YMR107W YMR196WQ04336 1088 aa5.7□□□□□ -1.5
SPG4YMR107W YLR287CQ05881 355 aa5.7□□□□□ -1.5
SPG4YMR107W TAH18Q12181 623 aa5.7□□□□□ -1.5
SPG4YMR107W YLL054CQ12244 843 aa5.7□□□□□ -1.5
SPG4YMR107W YOR111WQ99210 232 aa5.7□□□□□ -1.5
SPG4YMR107W ENO1P00924 437 aaKnown RBP5.69□□□□□ -1.5
SPG4YMR107W YMR085WP0CF18 432 aa5.69□□□□□ -1.5
SPG4YMR107W PEP5P12868 1029 aa5.69□□□□□ -1.5
SPG4YMR107W COQ1P18900 473 aa5.69□□□□□ -1.5
SPG4YMR107W HCA4P20448 770 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms