RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	YGL140C	P53120	1219 aa		7.63	□□□□□ -1.19
TIF1	YKR059W	ZDS2	P54786	942 aa		7.63	□□□□□ -1.19
TIF1	YKR059W	PKH1	Q03407	766 aa		7.63	□□□□□ -1.19
TIF1	YKR059W	YLR225C	Q05948	407 aa	Known RBP	7.63	□□□□□ -1.19
TIF1	YKR059W	YDL121C	Q07541	149 aa		7.63	□□□□□ -1.19
TIF1	YKR059W	ACK1	Q07622	623 aa	Predicted RBP	7.63	□□□□□ -1.19
TIF1	YKR059W	SLX4	Q12098	748 aa		7.63	□□□□□ -1.19
TIF1	YKR059W	PSF3	Q12146	194 aa		7.63	□□□□□ -1.19
TIF1	YKR059W	SWI1	P09547	1314 aa		7.62	□□□□□ -1.19
TIF1	YKR059W	CDC11	P32458	415 aa		7.62	□□□□□ -1.19
TIF1	YKR059W	RER2	P35196	286 aa		7.62	□□□□□ -1.19
TIF1	YKR059W	SEA4	P38164	1038 aa		7.62	□□□□□ -1.19
TIF1	YKR059W	GYP7	P48365	746 aa		7.62	□□□□□ -1.19
TIF1	YKR059W	PEX8	P53248	589 aa		7.62	□□□□□ -1.19
TIF1	YKR059W	MTC5	Q03897	1148 aa		7.62	□□□□□ -1.19
TIF1	YKR059W	ESC2	Q06340	456 aa		7.62	□□□□□ -1.19
TIF1	YKR059W	YDR306C	Q06640	478 aa		7.62	□□□□□ -1.19
TIF1	YKR059W	TMA17	Q12513	150 aa		7.62	□□□□□ -1.19
TIF1	YKR059W	FLO11	P08640	1367 aa		7.61	□□□□□ -1.19
TIF1	YKR059W	ARG82	P07250	355 aa		7.61	□□□□□ -1.19
TIF1	YKR059W	CBP1	P07252	654 aa		7.61	□□□□□ -1.19
TIF1	YKR059W	GSY1	P23337	708 aa		7.61	□□□□□ -1.19
TIF1	YKR059W	MSH3	P25336	1018 aa		7.61	□□□□□ -1.19
TIF1	YKR059W	YKL077W	P36081	392 aa		7.61	□□□□□ -1.19
TIF1	YKR059W	ATG14	P38270	344 aa		7.61	□□□□□ -1.19
TIF1	YKR059W	NIT1	P40447	199 aa		7.61	□□□□□ -1.19
TIF1	YKR059W	PFD1	P46988	109 aa		7.61	□□□□□ -1.19
TIF1	YKR059W	GNP1	P48813	663 aa		7.61	□□□□□ -1.19
TIF1	YKR059W	CUS1	Q02554	436 aa	Predicted RBP	7.61	□□□□□ -1.19
TIF1	YKR059W	NOG1	Q02892	647 aa	Known RBP	7.61	□□□□□ -1.19
TIF1	YKR059W	TMA64	Q04600	565 aa	Known RBP	7.61	□□□□□ -1.19
TIF1	YKR059W	RKM4	Q12504	494 aa		7.61	□□□□□ -1.19
TIF1	YKR059W	INO1	P11986	533 aa		7.6	□□□□□ -1.19
TIF1	YKR059W	YKL107W	P34251	309 aa		7.6	□□□□□ -1.19
TIF1	YKR059W	PNT1	P38969	423 aa		7.6	□□□□□ -1.19
TIF1	YKR059W	BRE2	P43132	505 aa		7.6	□□□□□ -1.19
TIF1	YKR059W	ALO1	P54783	526 aa	Known RBP	7.6	□□□□□ -1.19
TIF1	YKR059W	RSC2	Q06488	889 aa		7.6	□□□□□ -1.19
TIF1	YKR059W	FAP7	Q12055	197 aa	Predicted RBP	7.6	□□□□□ -1.19
TIF1	YKR059W	RPP1A	P05318	106 aa	Predicted RBP	7.59	□□□□□ -1.19
TIF1	YKR059W	RPS31	P05759	152 aa	Known RBP	7.59	□□□□□ -1.19
TIF1	YKR059W	GAR1	P28007	205 aa	Known RBP	7.59	□□□□□ -1.19
TIF1	YKR059W	APM2	P38700	605 aa		7.59	□□□□□ -1.19
TIF1	YKR059W	RTA1	P53047	317 aa		7.59	□□□□□ -1.19
TIF1	YKR059W	MTC3	P53077	123 aa		7.59	□□□□□ -1.19
TIF1	YKR059W	RPT4	P53549	437 aa	Known RBP	7.59	□□□□□ -1.19
TIF1	YKR059W	GCR2	Q01722	534 aa		7.59	□□□□□ -1.19
TIF1	YKR059W	UME1	Q03010	460 aa		7.59	□□□□□ -1.19
TIF1	YKR059W	FCP1	Q03254	732 aa		7.59	□□□□□ -1.19
TIF1	YKR059W	HED1	Q03937	162 aa		7.59	□□□□□ -1.19
TIF1	YKR059W	ATP4	P05626	244 aa		7.58	□□□□□ -1.2
TIF1	YKR059W	TOM70	P07213	617 aa	Known RBP	7.58	□□□□□ -1.2
TIF1	YKR059W	VMA4	P22203	233 aa	Known RBP	7.58	□□□□□ -1.2
TIF1	YKR059W	TRX2	P22803	104 aa	Known RBP	7.58	□□□□□ -1.2
TIF1	YKR059W	MGM1	P32266	881 aa		7.58	□□□□□ -1.2
TIF1	YKR059W	CCC2	P38995	1004 aa		7.58	□□□□□ -1.2
TIF1	YKR059W	GDH3	P39708	457 aa		7.58	□□□□□ -1.2
TIF1	YKR059W	SDA1	P53313	767 aa	Known RBP	7.58	□□□□□ -1.2
TIF1	YKR059W	YNL193W	P53870	558 aa		7.58	□□□□□ -1.2
TIF1	YKR059W	THI22	Q06490	572 aa		7.58	□□□□□ -1.2
TIF1	YKR059W	THI73	Q07904	523 aa		7.58	□□□□□ -1.2
TIF1	YKR059W	REC8	Q12188	680 aa		7.58	□□□□□ -1.2
TIF1	YKR059W	NPR1	P22211	790 aa		7.57	□□□□□ -1.2
TIF1	YKR059W	DUR3	P33413	735 aa		7.57	□□□□□ -1.2
TIF1	YKR059W	SHM1	P37292	490 aa	Predicted RBP	7.57	□□□□□ -1.2
TIF1	YKR059W	DSS1	P39112	969 aa		7.57	□□□□□ -1.2
TIF1	YKR059W	THI3	Q07471	609 aa		7.57	□□□□□ -1.2
TIF1	YKR059W	TAO3	P40468	2376 aa		7.56	□□□□□ -1.2
TIF1	YKR059W	SUP35	P05453	685 aa	Known RBP	7.56	□□□□□ -1.2
TIF1	YKR059W	DED1	P06634	604 aa	Known RBP	7.56	□□□□□ -1.2
TIF1	YKR059W	LCB1	P25045	558 aa	Known RBP	7.56	□□□□□ -1.2
TIF1	YKR059W	PDC6	P26263	563 aa	Known RBP	7.56	□□□□□ -1.2
TIF1	YKR059W	FUI1	P38196	639 aa		7.56	□□□□□ -1.2
TIF1	YKR059W	NCL1	P38205	684 aa	Known RBP	7.56	□□□□□ -1.2
TIF1	YKR059W	RIM11	P38615	370 aa		7.56	□□□□□ -1.2
TIF1	YKR059W	SKP1	P52286	194 aa		7.56	□□□□□ -1.2
TIF1	YKR059W	ATG16	Q03818	150 aa		7.56	□□□□□ -1.2
TIF1	YKR059W	NKP1	Q12493	238 aa		7.56	□□□□□ -1.2
TIF1	YKR059W	CMR1	Q12510	522 aa	Known RBP	7.56	□□□□□ -1.2
TIF1	YKR059W	LEU1	P07264	779 aa	Known RBP	7.55	□□□□□ -1.2
TIF1	YKR059W	SYP1	P25623	870 aa	Known RBP	7.55	□□□□□ -1.2
TIF1	YKR059W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.55	□□□□□ -1.2	not detected
TIF1	YKR059W	BET3	P36149	193 aa		7.55	□□□□□ -1.2
TIF1	YKR059W	ERP2	P39704	215 aa		7.55	□□□□□ -1.2
TIF1	YKR059W	HXT13	P39924	564 aa		7.55	□□□□□ -1.2
TIF1	YKR059W	HXT17	P53631	564 aa		7.55	□□□□□ -1.2
TIF1	YKR059W	HXT15	P54854	567 aa		7.55	□□□□□ -1.2
TIF1	YKR059W	ROD1	Q02805	837 aa		7.55	□□□□□ -1.2
TIF1	YKR059W	EST2	Q06163	884 aa		7.55	□□□□□ -1.2
TIF1	YKR059W	YOR378W	Q08902	515 aa		7.55	□□□□□ -1.2
TIF1	YKR059W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	7.54	□□□□□ -1.2	RIP-Chip
TIF1	YKR059W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.54	□□□□□ -1.2	not detected
TIF1	YKR059W	DOM34	P33309	386 aa		7.54	□□□□□ -1.2
TIF1	YKR059W	ASH1	P34233	588 aa		7.54	□□□□□ -1.2
TIF1	YKR059W	NUP133	P36161	1157 aa		7.54	□□□□□ -1.2
TIF1	YKR059W	MCM7	P38132	845 aa		7.54	□□□□□ -1.2
TIF1	YKR059W	MAL31	P38156	614 aa		7.54	□□□□□ -1.2
TIF1	YKR059W	BOI2	P39969	1040 aa		7.54	□□□□□ -1.2
TIF1	YKR059W	GSM1	P42950	618 aa		7.54	□□□□□ -1.2
TIF1	YKR059W	YGL176C	P46945	554 aa		7.54	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms