RNA–Protein interactions for RNA: YGL206C

CHC1, Transcript of Clathrin heavy chain, yeast

Gene CHC1, Length 4,962 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHC1	YGL206C	TRE2	Q08693	809 aa		2.26	□□□□□ -2.05
CHC1	YGL206C	SRF1	Q12516	437 aa		2.26	□□□□□ -2.05
CHC1	YGL206C	SRD1	P09007	221 aa		2.26	□□□□□ -2.05
CHC1	YGL206C	NAR1	P23503	491 aa	Known RBP	2.26	□□□□□ -2.05
CHC1	YGL206C	CCR4	P31384	837 aa	Known RBP	2.26	□□□□□ -2.05
CHC1	YGL206C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	2.26	□□□□□ -2.05	not detected
CHC1	YGL206C	TAF5	P38129	798 aa		2.26	□□□□□ -2.05
CHC1	YGL206C	CEM1	P39525	442 aa		2.26	□□□□□ -2.05
CHC1	YGL206C	GIP2	P40036	548 aa		2.26	□□□□□ -2.05
CHC1	YGL206C	TIM54	P47045	478 aa		2.26	□□□□□ -2.05
CHC1	YGL206C	UME1	Q03010	460 aa		2.26	□□□□□ -2.05
CHC1	YGL206C	SRC1	Q03707	834 aa		2.26	□□□□□ -2.05
CHC1	YGL206C	MCM21	Q06675	368 aa		2.26	□□□□□ -2.05
CHC1	YGL206C	INO1	P11986	533 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.25	□□□□□ -2.05	not detected
CHC1	YGL206C	REI1	P38344	393 aa	Predicted RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	UBA2	P52488	636 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	COG6	P53959	839 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	NAM8	Q00539	523 aa	Known RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	ROD1	Q02805	837 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	YMR265C	Q03508	461 aa	Known RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	SKY1	Q03656	742 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	BRE1	Q07457	700 aa	Known RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	AEP2	P22136	580 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	MCM3	P24279	971 aa	Known RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	BET3	P36149	193 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	ALG3	P38179	458 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	PAN5	P38787	379 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	SKN7	P38889	622 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	UTP7	P40055	554 aa	Known RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	RSC8	P43609	557 aa	Known RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	RTA1	P53047	317 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	EAF1	Q06337	982 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	MRL1	Q06815	381 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	PUS7	Q08647	676 aa	Known RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	TY1A-NL1	Q12391	440 aa	Known RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	CBF2	P32504	956 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	SEC6	P32844	805 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	CCT3	P39077	534 aa	Known RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	GPP2	P40106	250 aa	Known RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	PEF1	P53238	335 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	RTS3	P53289	263 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	PKH1	Q03407	766 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	YPL277C	Q08989	487 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	SCM3	Q12334	223 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	MTF2	P10849	440 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	HSF1	P10961	833 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.25	□□□□□ -2.05	not detected
CHC1	YGL206C	ECM21	P38167	1117 aa	Known RBP	2.25	□□□□□ -2.05
CHC1	YGL206C	RKM3	P38222	552 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	HSL7	P38274	827 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	GIC1	P38785	314 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	GYP8	P43570	497 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	IES1	P43579	692 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	MET12	P46151	657 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	GPG1	P53130	126 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	YGR045C	P53229	120 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	PPN1	Q04119	674 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	TFC6	Q06339	672 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	ATG23	Q06671	453 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	ADY3	Q07732	790 aa		2.25	□□□□□ -2.05
CHC1	YGL206C	MCD4	P36051	919 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	MIP6	P38760	659 aa	Known RBP	2.24	□□□□□ -2.05
CHC1	YGL206C	CRP1	P38845	465 aa	Known RBP	2.24	□□□□□ -2.05
CHC1	YGL206C	SRT1	Q03175	343 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	VPS5	Q92331	675 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	SEM1	O94742	89 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	SIS1	P25294	352 aa	Known RBP	2.24	□□□□□ -2.05
CHC1	YGL206C	MF(ALPHA)2	P32435	120 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	VPS27	P40343	622 aa	Known RBP	2.24	□□□□□ -2.05
CHC1	YGL206C	YGR125W	P53273	1036 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	CRD1	Q07560	283 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	PTC5	Q12511	572 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	HEM12	P32347	362 aa	Predicted RBP	2.24	□□□□□ -2.05
CHC1	YGL206C	YKL151C	P36059	337 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	YER158C	P40095	573 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	LSB6	P42951	607 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	YDR132C	Q03900	495 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	MTQ2	Q03920	221 aa	Predicted RBP	2.24	□□□□□ -2.05
CHC1	YGL206C	PUS5	Q06244	254 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	RSC58	Q07979	502 aa		2.24	□□□□□ -2.05
CHC1	YGL206C	NOP12	Q08208	459 aa	Known RBP	2.24	□□□□□ -2.05
CHC1	YGL206C	AI1	P03875	834 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	PTP2	P29461	750 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	ELM1	P32801	640 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	PPG1	P32838	368 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	MDJ1	P35191	511 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	ACA1	P39970	489 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	GPP1	P41277	250 aa	Known RBP	2.23	□□□□□ -2.05
CHC1	YGL206C	BAP3	P41815	604 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	SLS1	P42900	643 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	KIP3	P53086	805 aa	Known RBP	2.23	□□□□□ -2.05
CHC1	YGL206C	TGL2	P54857	326 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	NEW1	Q08972	1196 aa	Known RBP	2.23	□□□□□ -2.05
CHC1	YGL206C	KIN2	P13186	1147 aa	Known RBP	2.23	□□□□□ -2.05
CHC1	YGL206C	YKL133C	P36066	463 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	PEX7	P39108	375 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	YOR378W	Q08902	515 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	GPR1	Q12361	961 aa		2.23	□□□□□ -2.05
CHC1	YGL206C	CWH43	P25618	953 aa		2.23	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms