RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W AIM21P40563 679 aa7.49□□□□□ -1.21
NUP49YGL172W MDR1P53258 950 aa7.49□□□□□ -1.21
NUP49YGL172W MSC2Q03455 724 aa7.49□□□□□ -1.21
NUP49YGL172W RTP1Q12751 981 aa7.49□□□□□ -1.21
NUP49YGL172W KIN82P25341 720 aa7.48□□□□□ -1.21
NUP49YGL172W IRE1P32361 1115 aa7.48□□□□□ -1.21
NUP49YGL172W SLD2P34252 453 aa7.48□□□□□ -1.21
NUP49YGL172W ATG19P35193 415 aa7.48□□□□□ -1.21
NUP49YGL172W NCS2P53923 493 aaPredicted RBP7.48□□□□□ -1.21
NUP49YGL172W YDR090CQ03193 310 aa7.48□□□□□ -1.21
NUP49YGL172W TLG2Q08144 397 aa7.48□□□□□ -1.21
NUP49YGL172W SMC5Q08204 1093 aa7.48□□□□□ -1.21
NUP49YGL172W ATG11Q12527 1178 aa7.48□□□□□ -1.21
NUP49YGL172W RPL22AP05749 121 aaKnown RBP7.47□□□□□ -1.21
NUP49YGL172W DED1P06634 604 aaKnown RBP7.47□□□□□ -1.21
NUP49YGL172W TCP1P12612 559 aaKnown RBP7.47□□□□□ -1.21
NUP49YGL172W SNA3P14359 133 aa7.47□□□□□ -1.21
NUP49YGL172W SMY2P32909 740 aaKnown RBP7.47□□□□□ -1.21
NUP49YGL172W NPR3P38742 1146 aa7.47□□□□□ -1.21
NUP49YGL172W SNF7P39929 240 aaKnown RBP7.47□□□□□ -1.21
NUP49YGL172W KRE33P53914 1056 aaKnown RBP7.47□□□□□ -1.21
NUP49YGL172W VPS72Q03388 795 aa7.47□□□□□ -1.21
NUP49YGL172W NOC3Q07896 663 aaPredicted RBP7.47□□□□□ -1.21
NUP49YGL172W DBP5P20449 482 aaKnown RBP7.46□□□□□ -1.21
NUP49YGL172W UBC1P21734 215 aaKnown RBP7.46□□□□□ -1.21
NUP49YGL172W PGM2P37012 569 aaKnown RBP7.46□□□□□ -1.21
NUP49YGL172W EAF5P39995 279 aa7.46□□□□□ -1.21
NUP49YGL172W ACF4P47129 309 aa7.46□□□□□ -1.21
NUP49YGL172W TOF1P53840 1238 aa7.46□□□□□ -1.21
NUP49YGL172W ARK1P53974 638 aa7.46□□□□□ -1.21
NUP49YGL172W YDL057WQ07379 328 aa7.46□□□□□ -1.21
NUP49YGL172W AFT2Q08957 416 aa7.46□□□□□ -1.21
NUP49YGL172W YPL216WQ08964 1102 aa7.46□□□□□ -1.21
NUP49YGL172W PSE1P32337 1089 aaKnown RBP7.45□□□□□ -1.22
NUP49YGL172W RME1P32338 300 aaKnown RBP7.45□□□□□ -1.22
NUP49YGL172W RRM3P38766 723 aa7.45□□□□□ -1.22
NUP49YGL172W ERC1P38767 581 aa7.45□□□□□ -1.22
NUP49YGL172W SAD1P43589 448 aa7.45□□□□□ -1.22
NUP49YGL172W AVT1P47082 602 aa7.45□□□□□ -1.22
NUP49YGL172W SEC5P89102 971 aa7.45□□□□□ -1.22
NUP49YGL172W ROD1Q02805 837 aa7.45□□□□□ -1.22
NUP49YGL172W COQ9Q05779 260 aa7.45□□□□□ -1.22
NUP49YGL172W RPC53P25441 422 aa7.44□□□□□ -1.22
NUP49YGL172W GSY2P27472 705 aa7.44□□□□□ -1.22
NUP49YGL172W EFT1P32324 842 aaKnown RBP7.44□□□□□ -1.22
NUP49YGL172W DUR3P33413 735 aa7.44□□□□□ -1.22
NUP49YGL172W RPL34BP40525 121 aaKnown RBP7.44□□□□□ -1.22
NUP49YGL172W YFL034WP43564 1073 aa7.44□□□□□ -1.22
NUP49YGL172W TPO2P53283 614 aa7.44□□□□□ -1.22
NUP49YGL172W LSC2P53312 427 aa7.44□□□□□ -1.22
NUP49YGL172W VPS13Q07878 3144 aa7.44□□□□□ -1.22
NUP49YGL172W DAL7P21826 554 aa7.44□□□□□ -1.22
NUP49YGL172W AFT1P22149 690 aa7.44□□□□□ -1.22
NUP49YGL172W YKL091CP33324 310 aaKnown RBP7.44□□□□□ -1.22
NUP49YGL172W SPP382Q06411 708 aaPredicted RBP7.44□□□□□ -1.22
NUP49YGL172W TIF1P10081 395 aaKnown RBP7.43□□□□□ -1.22
NUP49YGL172W PCK1P10963 549 aa7.43□□□□□ -1.22
NUP49YGL172W PSO2P30620 661 aa7.43□□□□□ -1.22
NUP49YGL172W MSS51P32335 436 aa7.43□□□□□ -1.22
NUP49YGL172W COT1P32798 439 aa7.43□□□□□ -1.22
NUP49YGL172W UBP13P38187 747 aa7.43□□□□□ -1.22
NUP49YGL172W INP51P40559 946 aaKnown RBP7.43□□□□□ -1.22
NUP49YGL172W HUL4P40985 892 aa7.43□□□□□ -1.22
NUP49YGL172W AZR1P50080 613 aa7.43□□□□□ -1.22
NUP49YGL172W YGR237CP50089 785 aa7.43□□□□□ -1.22
NUP49YGL172W NBP1P52919 319 aaPredicted RBP7.43□□□□□ -1.22
NUP49YGL172W RTT102P53330 157 aa7.43□□□□□ -1.22
NUP49YGL172W YPL034WQ03083 165 aa7.43□□□□□ -1.22
NUP49YGL172W ECM30Q06673 1274 aa7.43□□□□□ -1.22
NUP49YGL172W YOL075CQ08234 1294 aa7.43□□□□□ -1.22
NUP49YGL172W YPL277CQ08989 487 aa7.43□□□□□ -1.22
NUP49YGL172W HIF1Q12373 385 aa7.43□□□□□ -1.22
NUP49YGL172W YDR524C-BQ3E6R4 66 aa7.43□□□□□ -1.22
NUP49YGL172W OM45P16547 393 aa7.42□□□□□ -1.22
NUP49YGL172W ATE1P16639 503 aa7.42□□□□□ -1.22
NUP49YGL172W YSC83P32792 385 aa7.42□□□□□ -1.22
NUP49YGL172W VPS35P34110 944 aa7.42□□□□□ -1.22
NUP49YGL172W YEL1P34225 687 aa7.42□□□□□ -1.22
NUP49YGL172W RKM3P38222 552 aa7.42□□□□□ -1.22
NUP49YGL172W KIC1P38692 1080 aa7.42□□□□□ -1.22
NUP49YGL172W ALD5P40047 520 aaKnown RBP7.42□□□□□ -1.22
NUP49YGL172W TOS3P43637 560 aa7.42□□□□□ -1.22
NUP49YGL172W TAM41P53230 385 aa7.42□□□□□ -1.22
NUP49YGL172W SSL2Q00578 843 aa7.42□□□□□ -1.22
NUP49YGL172W IES4Q08561 116 aa7.42□□□□□ -1.22
NUP49YGL172W OSW2Q12202 724 aa7.42□□□□□ -1.22
NUP49YGL172W HEM1P09950 548 aaPredicted RBP7.41□□□□□ -1.22
NUP49YGL172W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
NUP49YGL172W TRK2P28584 889 aa7.41□□□□□ -1.22
NUP49YGL172W NAM7P30771 971 aaKnown RBP7.41□□□□□ -1.22
NUP49YGL172W MRF1P30775 413 aaPredicted RBP7.41□□□□□ -1.22
NUP49YGL172W KNS1P32350 737 aaPredicted RBP7.41□□□□□ -1.22
NUP49YGL172W ADE17P38009 592 aaKnown RBP7.41□□□□□ -1.22
NUP49YGL172W BCD1P38772 366 aa7.41□□□□□ -1.22
NUP49YGL172W TIF11P38912 153 aaKnown RBP7.41□□□□□ -1.22
NUP49YGL172W SGM1P47166 707 aa7.41□□□□□ -1.22
NUP49YGL172W CCM1P48237 864 aaPredicted RBP7.41□□□□□ -1.22
NUP49YGL172W RSC1P53236 928 aa7.41□□□□□ -1.22
NUP49YGL172W CAF130P53280 1122 aaPredicted RBP7.41□□□□□ -1.22
NUP49YGL172W YNL146WP53906 100 aa7.41□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms