RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C TIM23P32897 222 aa8.56□□□□□ -1.04
PUP3YER094C MFT1P33441 392 aaKnown RBP8.56□□□□□ -1.04
PUP3YER094C LEO1P38439 464 aa8.56□□□□□ -1.04
PUP3YER094C MIP6P38760 659 aaKnown RBP8.56□□□□□ -1.04
PUP3YER094C PSP2P50109 593 aaKnown RBP8.56□□□□□ -1.04
PUP3YER094C DUS1P53759 423 aaKnown RBP8.56□□□□□ -1.04
PUP3YER094C CUR1Q06469 252 aa8.56□□□□□ -1.04
PUP3YER094C POX1P13711 748 aa8.55□□□□□ -1.04
PUP3YER094C SPO11P23179 398 aa8.55□□□□□ -1.04
PUP3YER094C IRE1P32361 1115 aa8.55□□□□□ -1.04
PUP3YER094C VPS35P34110 944 aa8.55□□□□□ -1.04
PUP3YER094C YEL1P34225 687 aa8.55□□□□□ -1.04
PUP3YER094C SHM1P37292 490 aaPredicted RBP8.55□□□□□ -1.04
PUP3YER094C FLR1P38124 548 aa8.55□□□□□ -1.04
PUP3YER094C ERC1P38767 581 aa8.55□□□□□ -1.04
PUP3YER094C RTT107P38850 1070 aa8.55□□□□□ -1.04
PUP3YER094C EAF5P39995 279 aa8.55□□□□□ -1.04
PUP3YER094C AVT1P47082 602 aa8.55□□□□□ -1.04
PUP3YER094C SCS3P53012 380 aa8.55□□□□□ -1.04
PUP3YER094C YLR287CQ05881 355 aa8.55□□□□□ -1.04
PUP3YER094C COG4Q06096 861 aa8.55□□□□□ -1.04
PUP3YER094C ICL2Q12031 575 aa8.55□□□□□ -1.04
PUP3YER094C SCP160P06105 1222 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
PUP3YER094C DED1P06634 604 aaKnown RBP8.54□□□□□ -1.04
PUP3YER094C SWI6P09959 803 aa8.54□□□□□ -1.04
PUP3YER094C MAS2P11914 482 aa8.54□□□□□ -1.04
PUP3YER094C SSD1P24276 1250 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
PUP3YER094C GPT2P36148 743 aa8.54□□□□□ -1.04
PUP3YER094C OSW7P43611 510 aa8.54□□□□□ -1.04
PUP3YER094C ROD1Q02805 837 aa8.54□□□□□ -1.04
PUP3YER094C GIR2Q03768 265 aaPredicted RBP8.54□□□□□ -1.04
PUP3YER094C MLH2Q07980 695 aa8.54□□□□□ -1.04
PUP3YER094C CWC2Q12046 339 aaPredicted RBP8.54□□□□□ -1.04
PUP3YER094C SSB1P11484 613 aaKnown RBP8.53□□□□□ -1.04
PUP3YER094C APL1P27351 700 aa8.53□□□□□ -1.04
PUP3YER094C SPC110P32380 944 aa8.53□□□□□ -1.04
PUP3YER094C MNR2P35724 969 aa8.53□□□□□ -1.04
PUP3YER094C UBP5P39944 805 aa8.53□□□□□ -1.04
PUP3YER094C SSB2P40150 613 aaKnown RBP8.53□□□□□ -1.04
PUP3YER094C PSF2P40359 213 aa8.53□□□□□ -1.04
PUP3YER094C TPO2P53283 614 aa8.53□□□□□ -1.04
PUP3YER094C COQ9Q05779 260 aa8.53□□□□□ -1.04
PUP3YER094C ESC2Q06340 456 aa8.53□□□□□ -1.04
PUP3YER094C APL4Q12028 832 aa8.53□□□□□ -1.04
PUP3YER094C RRP6Q12149 733 aaKnown RBP8.53□□□□□ -1.04
PUP3YER094C MOT1P32333 1867 aa8.52□□□□□ -1.05
PUP3YER094C CHS2P14180 963 aa8.52□□□□□ -1.05
PUP3YER094C KIN82P25341 720 aa8.52□□□□□ -1.05
PUP3YER094C EFT1P32324 842 aaKnown RBP8.52□□□□□ -1.05
PUP3YER094C COT1P32798 439 aa8.52□□□□□ -1.05
PUP3YER094C SMY2P32909 740 aaKnown RBP8.52□□□□□ -1.05
PUP3YER094C VFA1P40080 203 aa8.52□□□□□ -1.05
PUP3YER094C STR2P47164 639 aa8.52□□□□□ -1.05
PUP3YER094C NCS6P53088 359 aa8.52□□□□□ -1.05
PUP3YER094C TAM41P53230 385 aa8.52□□□□□ -1.05
PUP3YER094C CAF130P53280 1122 aaPredicted RBP8.52□□□□□ -1.05
PUP3YER094C RTT102P53330 157 aa8.52□□□□□ -1.05
PUP3YER094C BRE5P53741 515 aaKnown RBP8.52□□□□□ -1.05
PUP3YER094C YCG1Q06680 1035 aa8.52□□□□□ -1.05
PUP3YER094C OSW2Q12202 724 aa8.52□□□□□ -1.05
PUP3YER094C RRP43P25359 394 aaPredicted RBP8.51□□□□□ -1.05
PUP3YER094C NAM7P30771 971 aaKnown RBP8.51□□□□□ -1.05
PUP3YER094C XRS2P33301 854 aa8.51□□□□□ -1.05
PUP3YER094C EFM2P38347 419 aa8.51□□□□□ -1.05
PUP3YER094C GUA1P38625 525 aaKnown RBP8.51□□□□□ -1.05
PUP3YER094C ACF4P47129 309 aa8.51□□□□□ -1.05
PUP3YER094C YJR107WP47145 328 aa8.51□□□□□ -1.05
PUP3YER094C COS5P47187 383 aa8.51□□□□□ -1.05
PUP3YER094C HFM1P51979 1187 aa8.51□□□□□ -1.05
PUP3YER094C TIM8P57744 87 aa8.51□□□□□ -1.05
PUP3YER094C IES4Q08561 116 aa8.51□□□□□ -1.05
PUP3YER094C HMI1Q12039 706 aa8.51□□□□□ -1.05
PUP3YER094C ATG9Q12142 997 aa8.51□□□□□ -1.05
PUP3YER094C YOR131CQ12486 218 aa8.51□□□□□ -1.05
PUP3YER094C SNA3P14359 133 aa8.5□□□□□ -1.05
PUP3YER094C DBP1P24784 617 aaKnown RBP8.5□□□□□ -1.05
PUP3YER094C RME1P32338 300 aaKnown RBP8.5□□□□□ -1.05
PUP3YER094C MUD1P32605 298 aaKnown RBP8.5□□□□□ -1.05
PUP3YER094C NIP100P33420 868 aa8.5□□□□□ -1.05
PUP3YER094C MNN4P36044 1178 aa8.5□□□□□ -1.05
PUP3YER094C KSP1P38691 1029 aaKnown RBP8.5□□□□□ -1.05
PUP3YER094C RRD1P40454 393 aaKnown RBP8.5□□□□□ -1.05
PUP3YER094C LCB2P40970 561 aa8.5□□□□□ -1.05
PUP3YER094C SKP2P42843 763 aa8.5□□□□□ -1.05
PUP3YER094C VTC3Q02725 835 aa8.5□□□□□ -1.05
PUP3YER094C UME1Q03010 460 aa8.5□□□□□ -1.05
PUP3YER094C YPR078CQ06813 372 aa8.5□□□□□ -1.05
PUP3YER094C PLP2Q12017 286 aa8.5□□□□□ -1.05
PUP3YER094C HIF1Q12373 385 aa8.5□□□□□ -1.05
PUP3YER094C RIF1P29539 1916 aa8.49□□□□□ -1.05
PUP3YER094C VMA1P17255 1071 aaKnown RBP8.49□□□□□ -1.05
PUP3YER094C UBC1P21734 215 aaKnown RBP8.49□□□□□ -1.05
PUP3YER094C KTR2P33550 425 aa8.49□□□□□ -1.05
PUP3YER094C PXL1P36166 706 aa8.49□□□□□ -1.05
PUP3YER094C ATG3P40344 310 aa8.49□□□□□ -1.05
PUP3YER094C SMC3P47037 1230 aa8.49□□□□□ -1.05
PUP3YER094C CUL3P53202 744 aa8.49□□□□□ -1.05
PUP3YER094C YNL146WP53906 100 aa8.49□□□□□ -1.05
PUP3YER094C DAK1P54838 584 aaKnown RBP8.49□□□□□ -1.05
PUP3YER094C YDR090CQ03193 310 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms