RNA–Protein interactions for RNA: YBR231C

SWC5, Transcript of Component of the SWR1 complex, yeast

Gene SWC5, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC5	YBR231C	COT1	P32798	439 aa		11.77	□□□□□ -0.53
SWC5	YBR231C	MPE1	P35728	441 aa	Known RBP	11.77	□□□□□ -0.53
SWC5	YBR231C	VPS62	P53285	467 aa		11.77	□□□□□ -0.53
SWC5	YBR231C	TOF1	P53840	1238 aa		11.77	□□□□□ -0.53
SWC5	YBR231C	DAK1	P54838	584 aa	Known RBP	11.77	□□□□□ -0.53
SWC5	YBR231C	MSC2	Q03455	724 aa		11.77	□□□□□ -0.53
SWC5	YBR231C	MED1	Q12321	566 aa		11.77	□□□□□ -0.53
SWC5	YBR231C	MDM20	Q12387	796 aa	Known RBP	11.77	□□□□□ -0.53
SWC5	YBR231C	CDC37	P06101	506 aa	Known RBP	11.76	□□□□□ -0.53
SWC5	YBR231C	PHO8	P11491	566 aa		11.76	□□□□□ -0.53
SWC5	YBR231C	MRC1	P25588	1096 aa		11.76	□□□□□ -0.53
SWC5	YBR231C	MRF1	P30775	413 aa	Predicted RBP	11.76	□□□□□ -0.53
SWC5	YBR231C	SMY2	P32909	740 aa	Known RBP	11.76	□□□□□ -0.53
SWC5	YBR231C	MIC60	P36112	540 aa		11.76	□□□□□ -0.53
SWC5	YBR231C	PSY4	P38193	441 aa		11.76	□□□□□ -0.53
SWC5	YBR231C	GUA1	P38625	525 aa	Known RBP	11.76	□□□□□ -0.53
SWC5	YBR231C	EAF5	P39995	279 aa		11.76	□□□□□ -0.53
SWC5	YBR231C	EBS1	Q03466	884 aa	Known RBP	11.76	□□□□□ -0.53
SWC5	YBR231C	COG4	Q06096	861 aa		11.76	□□□□□ -0.53
SWC5	YBR231C	NOC3	Q07896	663 aa	Predicted RBP	11.76	□□□□□ -0.53
SWC5	YBR231C	HIF1	Q12373	385 aa		11.76	□□□□□ -0.53
SWC5	YBR231C	RTP1	Q12751	981 aa		11.76	□□□□□ -0.53
SWC5	YBR231C	PSO2	P30620	661 aa		11.75	□□□□□ -0.53
SWC5	YBR231C	AFG3	P39925	761 aa		11.75	□□□□□ -0.53
SWC5	YBR231C	TOS3	P43637	560 aa		11.75	□□□□□ -0.53
SWC5	YBR231C	TMA16	Q08687	178 aa		11.75	□□□□□ -0.53
SWC5	YBR231C	HFI1	Q12060	488 aa		11.75	□□□□□ -0.53
SWC5	YBR231C	RIF1	P29539	1916 aa		11.75	□□□□□ -0.53
SWC5	YBR231C	CCM1	P48237	864 aa	Predicted RBP	11.74	□□□□□ -0.53
SWC5	YBR231C	RTT102	P53330	157 aa		11.74	□□□□□ -0.53
SWC5	YBR231C	YAP7	Q08182	245 aa		11.74	□□□□□ -0.53
SWC5	YBR231C	YPL216W	Q08964	1102 aa		11.74	□□□□□ -0.53
SWC5	YBR231C	NCR1	Q12200	1170 aa		11.74	□□□□□ -0.53
SWC5	YBR231C	TFC8	Q12308	588 aa		11.74	□□□□□ -0.53
SWC5	YBR231C	ATG11	Q12527	1178 aa		11.74	□□□□□ -0.53
SWC5	YBR231C	DAL7	P21826	554 aa		11.73	□□□□□ -0.53
SWC5	YBR231C	TRK2	P28584	889 aa		11.73	□□□□□ -0.53
SWC5	YBR231C	DPH2	P32461	534 aa		11.73	□□□□□ -0.53
SWC5	YBR231C	MNN4	P36044	1178 aa		11.73	□□□□□ -0.53
SWC5	YBR231C	SAP190	P36123	1033 aa		11.73	□□□□□ -0.53
SWC5	YBR231C	AVT1	P47082	602 aa		11.73	□□□□□ -0.53
SWC5	YBR231C	JJJ3	P47138	172 aa		11.73	□□□□□ -0.53
SWC5	YBR231C	CUS1	Q02554	436 aa	Predicted RBP	11.73	□□□□□ -0.53
SWC5	YBR231C	YOL075C	Q08234	1294 aa		11.73	□□□□□ -0.53
SWC5	YBR231C	IES4	Q08561	116 aa		11.73	□□□□□ -0.53
SWC5	YBR231C	OSW2	Q12202	724 aa		11.73	□□□□□ -0.53
SWC5	YBR231C	YEL1	P34225	687 aa		11.72	□□□□□ -0.53
SWC5	YBR231C	YET1	P35723	206 aa		11.72	□□□□□ -0.53
SWC5	YBR231C	LDH1	P38139	375 aa		11.72	□□□□□ -0.53
SWC5	YBR231C	SHE10	P53075	577 aa		11.72	□□□□□ -0.53
SWC5	YBR231C	TAM41	P53230	385 aa		11.72	□□□□□ -0.53
SWC5	YBR231C	NAM7	P30771	971 aa	Known RBP	11.71	□□□□□ -0.53
SWC5	YBR231C	EBP2	P36049	427 aa	Known RBP	11.71	□□□□□ -0.53
SWC5	YBR231C	EFM2	P38347	419 aa		11.71	□□□□□ -0.53
SWC5	YBR231C	ERC1	P38767	581 aa		11.71	□□□□□ -0.53
SWC5	YBR231C	RLP24	Q07915	199 aa	Known RBP	11.71	□□□□□ -0.53
SWC5	YBR231C	CDC53	Q12018	815 aa	Known RBP	11.71	□□□□□ -0.53
SWC5	YBR231C	MSS51	P32335	436 aa		11.7	□□□□□ -0.54
SWC5	YBR231C	UIP5	P36137	443 aa		11.7	□□□□□ -0.54
SWC5	YBR231C	CTM1	P38818	585 aa		11.7	□□□□□ -0.54
SWC5	YBR231C	UBP5	P39944	805 aa		11.7	□□□□□ -0.54
SWC5	YBR231C	ACF4	P47129	309 aa		11.7	□□□□□ -0.54
SWC5	YBR231C	YNL146W	P53906	100 aa		11.7	□□□□□ -0.54
SWC5	YBR231C	VTC3	Q02725	835 aa		11.7	□□□□□ -0.54
SWC5	YBR231C	DON1	Q05610	365 aa		11.7	□□□□□ -0.54
SWC5	YBR231C	MAM3	Q12296	706 aa		11.7	□□□□□ -0.54
SWC5	YBR231C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	11.69	□□□□□ -0.54	not detected
SWC5	YBR231C	APL1	P27351	700 aa		11.69	□□□□□ -0.54
SWC5	YBR231C	DUR3	P33413	735 aa		11.69	□□□□□ -0.54
SWC5	YBR231C	FYV8	P46949	817 aa	Known RBP	11.69	□□□□□ -0.54
SWC5	YBR231C	COS5	P47187	383 aa		11.69	□□□□□ -0.54
SWC5	YBR231C	CUL3	P53202	744 aa		11.69	□□□□□ -0.54
SWC5	YBR231C	VPS75	P53853	264 aa		11.69	□□□□□ -0.54
SWC5	YBR231C	ECM7	Q06200	448 aa		11.69	□□□□□ -0.54
SWC5	YBR231C	HEM1	P09950	548 aa	Predicted RBP	11.68	□□□□□ -0.54
SWC5	YBR231C	PHO13	P19881	312 aa		11.68	□□□□□ -0.54
SWC5	YBR231C	SPO11	P23179	398 aa		11.68	□□□□□ -0.54
SWC5	YBR231C	MIP6	P38760	659 aa	Known RBP	11.68	□□□□□ -0.54
SWC5	YBR231C	MGA2	P40578	1113 aa		11.68	□□□□□ -0.54
SWC5	YBR231C	LCB2	P40970	561 aa		11.68	□□□□□ -0.54
SWC5	YBR231C	FIG4	P42837	879 aa		11.68	□□□□□ -0.54
SWC5	YBR231C	ECM30	Q06673	1274 aa		11.68	□□□□□ -0.54
SWC5	YBR231C	VMA1	P17255	1071 aa	Known RBP	11.67	□□□□□ -0.54
SWC5	YBR231C	TMT1	P32643	299 aa		11.67	□□□□□ -0.54
SWC5	YBR231C	BUD2	P33314	1104 aa		11.67	□□□□□ -0.54
SWC5	YBR231C	SPT8	P38915	602 aa		11.67	□□□□□ -0.54
SWC5	YBR231C	ALD5	P40047	520 aa	Known RBP	11.67	□□□□□ -0.54
SWC5	YBR231C	FMP30	Q02883	468 aa		11.67	□□□□□ -0.54
SWC5	YBR231C	GIR2	Q03768	265 aa	Predicted RBP	11.67	□□□□□ -0.54
SWC5	YBR231C	SPO75	Q07798	868 aa		11.67	□□□□□ -0.54
SWC5	YBR231C	SSB1	P11484	613 aa	Known RBP	11.66	□□□□□ -0.54
SWC5	YBR231C	WHI2	P12611	486 aa		11.66	□□□□□ -0.54
SWC5	YBR231C	MSH3	P25336	1018 aa		11.66	□□□□□ -0.54
SWC5	YBR231C	MCM2	P29469	868 aa		11.66	□□□□□ -0.54
SWC5	YBR231C	PXL1	P36166	706 aa		11.66	□□□□□ -0.54
SWC5	YBR231C	NPP2	P39997	493 aa		11.66	□□□□□ -0.54
SWC5	YBR231C	SSB2	P40150	613 aa	Known RBP	11.66	□□□□□ -0.54
SWC5	YBR231C	TIM8	P57744	87 aa		11.66	□□□□□ -0.54
SWC5	YBR231C	VPS72	Q03388	795 aa		11.66	□□□□□ -0.54
SWC5	YBR231C	MLH2	Q07980	695 aa		11.66	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms