RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W NPR3P38742 1146 aa17.28■□□□□ 0.36
CCC1YLR220W ECM29P38737 1868 aa17.28■□□□□ 0.36
CCC1YLR220W BCS1P32839 456 aa17.27■□□□□ 0.36
CCC1YLR220W SIP3P38717 1229 aa17.27■□□□□ 0.36
CCC1YLR220W SUT2Q12286 268 aa17.27■□□□□ 0.36
CCC1YLR220W TRS33Q99394 268 aa17.27■□□□□ 0.36
CCC1YLR220W DBP1P24784 617 aaKnown RBP17.26■□□□□ 0.35
CCC1YLR220W CDC15P27636 974 aa17.26■□□□□ 0.35
CCC1YLR220W RME1P32338 300 aaKnown RBP17.26■□□□□ 0.35
CCC1YLR220W RPS7BP48164 190 aaKnown RBP17.26■□□□□ 0.35
CCC1YLR220W PIH1P38768 344 aa17.25■□□□□ 0.35
CCC1YLR220W YEL025CP39991 1188 aa17.25■□□□□ 0.35
CCC1YLR220W BRE5P53741 515 aaKnown RBP17.25■□□□□ 0.35
CCC1YLR220W PSR2Q07949 397 aa17.25■□□□□ 0.35
CCC1YLR220W PDC1P06169 563 aaKnown RBP17.23■□□□□ 0.35
CCC1YLR220W NOC2P39744 710 aaKnown RBP17.23■□□□□ 0.35
CCC1YLR220W FYV10P40492 516 aa17.23■□□□□ 0.35
CCC1YLR220W ULP2P40537 1034 aaPredicted RBP17.23■□□□□ 0.35
CCC1YLR220W YJR107WP47145 328 aa17.23■□□□□ 0.35
CCC1YLR220W GUP1P53154 560 aa17.23■□□□□ 0.35
CCC1YLR220W MDR1P53258 950 aa17.23■□□□□ 0.35
CCC1YLR220W KIN82P25341 720 aa17.22■□□□□ 0.35
CCC1YLR220W RAM2P29703 316 aa17.22■□□□□ 0.35
CCC1YLR220W KNS1P32350 737 aaPredicted RBP17.22■□□□□ 0.35
CCC1YLR220W FLR1P38124 548 aa17.22■□□□□ 0.35
CCC1YLR220W KSP1P38691 1029 aaKnown RBP17.22■□□□□ 0.35
CCC1YLR220W AFG3P39925 761 aa17.22■□□□□ 0.35
CCC1YLR220W SEC5P89102 971 aa17.22■□□□□ 0.35
CCC1YLR220W VMS1Q04311 632 aaKnown RBP17.22■□□□□ 0.35
CCC1YLR220W YLL058WQ12198 575 aa17.22■□□□□ 0.35
CCC1YLR220W TCP1P12612 559 aaKnown RBP17.21■□□□□ 0.35
CCC1YLR220W PFK1P16861 987 aaKnown RBP17.21■□□□□ 0.35
CCC1YLR220W GSY2P27472 705 aa17.21■□□□□ 0.35
CCC1YLR220W SKP2P42843 763 aa17.21■□□□□ 0.35
CCC1YLR220W MDM20Q12387 796 aaKnown RBP17.21■□□□□ 0.35
CCC1YLR220W PAH1P32567 862 aa17.2■□□□□ 0.34
CCC1YLR220W SAC6P32599 642 aaKnown RBP17.2■□□□□ 0.34
CCC1YLR220W RRM3P38766 723 aa17.2■□□□□ 0.34
CCC1YLR220W ROD1Q02805 837 aa17.2■□□□□ 0.34
CCC1YLR220W YML020WQ03722 664 aa17.2■□□□□ 0.34
CCC1YLR220W YOR131CQ12486 218 aa17.2■□□□□ 0.34
CCC1YLR220W GPT2P36148 743 aa17.19■□□□□ 0.34
CCC1YLR220W PGM2P37012 569 aaKnown RBP17.19■□□□□ 0.34
CCC1YLR220W BCD1P38772 366 aa17.19■□□□□ 0.34
CCC1YLR220W RPN3P40016 523 aaKnown RBP17.19■□□□□ 0.34
CCC1YLR220W SVF1Q05515 481 aa17.19■□□□□ 0.34
CCC1YLR220W RKM3P38222 552 aa17.18■□□□□ 0.34
CCC1YLR220W VPS62P53285 467 aa17.18■□□□□ 0.34
CCC1YLR220W ARK1P53974 638 aa17.18■□□□□ 0.34
CCC1YLR220W GPI13Q07830 1017 aa17.18■□□□□ 0.34
CCC1YLR220W MAS2P11914 482 aa17.17■□□□□ 0.34
CCC1YLR220W CDC48P25694 835 aaKnown RBP17.17■□□□□ 0.34
CCC1YLR220W NCS2P53923 493 aaPredicted RBP17.17■□□□□ 0.34
CCC1YLR220W COQ9Q05779 260 aa17.17■□□□□ 0.34
CCC1YLR220W CUR1Q06469 252 aa17.17■□□□□ 0.34
CCC1YLR220W YDL057WQ07379 328 aa17.17■□□□□ 0.34
CCC1YLR220W SMC5Q08204 1093 aa17.17■□□□□ 0.34
CCC1YLR220W DED1P06634 604 aaKnown RBP17.16■□□□□ 0.34
CCC1YLR220W TAF13P11747 167 aa17.16■□□□□ 0.34
CCC1YLR220W DAK1P54838 584 aaKnown RBP17.16■□□□□ 0.34
CCC1YLR220W ATE1P16639 503 aa17.15■□□□□ 0.34
CCC1YLR220W UBC1P21734 215 aaKnown RBP17.15■□□□□ 0.34
CCC1YLR220W PPS1P38148 807 aa17.15■□□□□ 0.34
CCC1YLR220W HUL4P40985 892 aa17.15■□□□□ 0.34
CCC1YLR220W CAF130P53280 1122 aaPredicted RBP17.15■□□□□ 0.34
CCC1YLR220W MSC2Q03455 724 aa17.15■□□□□ 0.34
CCC1YLR220W NCR1Q12200 1170 aa17.15■□□□□ 0.34
CCC1YLR220W SNA3P14359 133 aa17.14■□□□□ 0.33
CCC1YLR220W EFT1P32324 842 aaKnown RBP17.14■□□□□ 0.33
CCC1YLR220W TCO89Q08921 799 aa17.14■□□□□ 0.33
CCC1YLR220W AFT2Q08957 416 aa17.14■□□□□ 0.33
CCC1YLR220W PCK1P10963 549 aa17.13■□□□□ 0.33
CCC1YLR220W YGR237CP50089 785 aa17.13■□□□□ 0.33
CCC1YLR220W RSC1P53236 928 aa17.13■□□□□ 0.33
CCC1YLR220W ATG11Q12527 1178 aa17.13■□□□□ 0.33
CCC1YLR220W IRE1P32361 1115 aa17.12■□□□□ 0.33
CCC1YLR220W ATG19P35193 415 aa17.12■□□□□ 0.33
CCC1YLR220W YFL034WP43564 1073 aa17.12■□□□□ 0.33
CCC1YLR220W PSP2P50109 593 aaKnown RBP17.12■□□□□ 0.33
CCC1YLR220W TLG2Q08144 397 aa17.12■□□□□ 0.33
CCC1YLR220W YPL277CQ08989 487 aa17.12■□□□□ 0.33
CCC1YLR220W RTP1Q12751 981 aa17.12■□□□□ 0.33
CCC1YLR220W DBP5P20449 482 aaKnown RBP17.11■□□□□ 0.33
CCC1YLR220W COT1P32798 439 aa17.11■□□□□ 0.33
CCC1YLR220W VID30P53076 958 aa17.11■□□□□ 0.33
CCC1YLR220W SPP382Q06411 708 aaPredicted RBP17.11■□□□□ 0.33
CCC1YLR220W AFT1P22149 690 aa17.1■□□□□ 0.33
CCC1YLR220W UIP5P36137 443 aa17.1■□□□□ 0.33
CCC1YLR220W ADE17P38009 592 aaKnown RBP17.1■□□□□ 0.33
CCC1YLR220W LDH1P38139 375 aa17.1■□□□□ 0.33
CCC1YLR220W NBP1P52919 319 aaPredicted RBP17.1■□□□□ 0.33
CCC1YLR220W YSC83P32792 385 aa17.09■□□□□ 0.33
CCC1YLR220W SMY2P32909 740 aaKnown RBP17.09■□□□□ 0.33
CCC1YLR220W YKL091CP33324 310 aaKnown RBP17.09■□□□□ 0.33
CCC1YLR220W UBP13P38187 747 aa17.09■□□□□ 0.33
CCC1YLR220W BIM1P40013 344 aa17.09■□□□□ 0.33
CCC1YLR220W AIP1P46680 615 aaKnown RBP17.09■□□□□ 0.33
CCC1YLR220W LSC2P53312 427 aa17.09■□□□□ 0.33
CCC1YLR220W TOF1P53840 1238 aa17.09■□□□□ 0.33
CCC1YLR220W SSL2Q00578 843 aa17.09■□□□□ 0.33
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms