RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C PIP2P52960 996 aa5.3□□□□□ -1.56
UBI4YLL039C KAR5Q04746 504 aa5.3□□□□□ -1.56
UBI4YLL039C OPI1P21957 404 aa5.29□□□□□ -1.56
UBI4YLL039C SFA1P32771 386 aa5.29□□□□□ -1.56
UBI4YLL039C TGL4P36165 910 aa5.29□□□□□ -1.56
UBI4YLL039C IRC8P47046 822 aa5.29□□□□□ -1.56
UBI4YLL039C PCL8Q08966 492 aa5.29□□□□□ -1.56
UBI4YLL039C CSR2Q12734 1121 aa5.29□□□□□ -1.56
UBI4YLL039C FLO1P32768 1537 aa5.28□□□□□ -1.56
UBI4YLL039C LAM4P38800 1345 aa5.28□□□□□ -1.56
UBI4YLL039C VAS1P07806 1104 aaKnown RBP5.28□□□□□ -1.56
UBI4YLL039C RAD53P22216 821 aa5.28□□□□□ -1.56
UBI4YLL039C ADP1P25371 1049 aa5.28□□□□□ -1.56
UBI4YLL039C VMA3P25515 160 aa5.28□□□□□ -1.56
UBI4YLL039C KEL1P38853 1164 aaKnown RBP5.28□□□□□ -1.56
UBI4YLL039C PNT1P38969 423 aa5.28□□□□□ -1.56
UBI4YLL039C ENP2P48234 707 aaKnown RBP5.28□□□□□ -1.56
UBI4YLL039C RRT6P53117 311 aaPredicted RBP5.28□□□□□ -1.56
UBI4YLL039C YOR296WQ08748 1289 aa5.28□□□□□ -1.56
UBI4YLL039C RIM20Q12033 661 aa5.28□□□□□ -1.56
UBI4YLL039C TAH18Q12181 623 aa5.28□□□□□ -1.56
UBI4YLL039C SLP1Q12232 587 aa5.28□□□□□ -1.56
UBI4YLL039C TRS33Q99394 268 aa5.28□□□□□ -1.56
UBI4YLL039C PMA1P05030 918 aaKnown RBP5.27□□□□□ -1.57
UBI4YLL039C COQ1P18900 473 aa5.27□□□□□ -1.57
UBI4YLL039C MRPL33P20084 86 aa5.27□□□□□ -1.57
UBI4YLL039C TTI1P36097 1038 aa5.27□□□□□ -1.57
UBI4YLL039C STM1P39015 273 aaKnown RBP5.27□□□□□ -1.57
UBI4YLL039C MSH4P40965 878 aaPredicted RBP5.27□□□□□ -1.57
UBI4YLL039C ECM23Q02710 187 aa5.27□□□□□ -1.57
UBI4YLL039C PPM2Q08282 695 aa5.27□□□□□ -1.57
UBI4YLL039C YPL260WQ08977 551 aa5.27□□□□□ -1.57
UBI4YLL039C KEL3Q08979 651 aaPredicted RBP5.27□□□□□ -1.57
UBI4YLL039C AAP1P37898 856 aaKnown RBP5.26□□□□□ -1.57
UBI4YLL039C BRN1P38170 754 aa5.26□□□□□ -1.57
UBI4YLL039C YBL028CP38202 106 aa5.26□□□□□ -1.57
UBI4YLL039C BSD2P38356 321 aa5.26□□□□□ -1.57
UBI4YLL039C ETP1P38748 585 aaKnown RBP5.26□□□□□ -1.57
UBI4YLL039C RIX1P38883 763 aaPredicted RBP5.26□□□□□ -1.57
UBI4YLL039C RTS1P38903 757 aa5.26□□□□□ -1.57
UBI4YLL039C FPR4Q06205 392 aaPredicted RBP5.26□□□□□ -1.57
UBI4YLL039C TY4B-PA0A0B7P3V8 1104 aa5.25□□□□□ -1.57
UBI4YLL039C HVG1P0CE11 249 aa5.25□□□□□ -1.57
UBI4YLL039C PFK2P16862 959 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
UBI4YLL039C YBR197CP38306 217 aa5.25□□□□□ -1.57
UBI4YLL039C YHL050CP38721 697 aa5.25□□□□□ -1.57
UBI4YLL039C YIR014WP40570 242 aa5.25□□□□□ -1.57
UBI4YLL039C YDL124WQ07551 312 aaKnown RBP5.25□□□□□ -1.57
UBI4YLL039C TY4A-HQ6Q5P6 413 aa5.25□□□□□ -1.57
UBI4YLL039C TRP3P00937 484 aa5.24□□□□□ -1.57
UBI4YLL039C TUB2P02557 457 aaKnown RBP5.24□□□□□ -1.57
UBI4YLL039C CHO2P05374 869 aaKnown RBP5.24□□□□□ -1.57
UBI4YLL039C PRE8P23639 250 aa5.24□□□□□ -1.57
UBI4YLL039C GIP1P38229 639 aa5.24□□□□□ -1.57
UBI4YLL039C DYS1P38791 387 aa5.24□□□□□ -1.57
UBI4YLL039C RRP8P38961 392 aaKnown RBP5.24□□□□□ -1.57
UBI4YLL039C GIP2P40036 548 aa5.24□□□□□ -1.57
UBI4YLL039C TED1P40533 473 aa5.24□□□□□ -1.57
UBI4YLL039C SNU71P53207 620 aaKnown RBP5.24□□□□□ -1.57
UBI4YLL039C MRD1Q06106 887 aaKnown RBP5.24□□□□□ -1.57
UBI4YLL039C GIN4Q12263 1142 aa5.24□□□□□ -1.57
UBI4YLL039C RAD61Q99359 647 aa5.24□□□□□ -1.57
UBI4YLL039C SRM1P21827 482 aa5.23□□□□□ -1.57
UBI4YLL039C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
UBI4YLL039C YKR073CP36153 106 aa5.23□□□□□ -1.57
UBI4YLL039C CST26P38226 397 aa5.23□□□□□ -1.57
UBI4YLL039C SNF7P39929 240 aaKnown RBP5.23□□□□□ -1.57
UBI4YLL039C VID27P40157 782 aa5.23□□□□□ -1.57
UBI4YLL039C HXT17P53631 564 aa5.23□□□□□ -1.57
UBI4YLL039C DUS1P53759 423 aaKnown RBP5.23□□□□□ -1.57
UBI4YLL039C RPS15Q01855 142 aaKnown RBP5.23□□□□□ -1.57
UBI4YLL039C SKG3Q06315 1026 aa5.23□□□□□ -1.57
UBI4YLL039C SPN1Q06505 410 aaPredicted RBP5.23□□□□□ -1.57
UBI4YLL039C SSF2Q12153 453 aaPredicted RBP5.23□□□□□ -1.57
UBI4YLL039C YLR122CQ12312 125 aa5.23□□□□□ -1.57
UBI4YLL039C TY1A-NL1Q12391 440 aaKnown RBP5.23□□□□□ -1.57
UBI4YLL039C RSC6P25632 483 aa5.22□□□□□ -1.57
UBI4YLL039C COQ2P32378 372 aa5.22□□□□□ -1.57
UBI4YLL039C OPY1P38271 328 aa5.22□□□□□ -1.57
UBI4YLL039C UBX7P38349 436 aa5.22□□□□□ -1.57
UBI4YLL039C CRG1P38892 291 aaRIP-Chip data5.22□□□□□ -1.57not detected
UBI4YLL039C HXT13P39924 564 aa5.22□□□□□ -1.57
UBI4YLL039C ACA1P39970 489 aa5.22□□□□□ -1.57
UBI4YLL039C SOK2P53438 785 aaPredicted RBP5.22□□□□□ -1.57
UBI4YLL039C UFD2P54860 961 aa5.22□□□□□ -1.57
UBI4YLL039C RBA50Q04418 439 aa5.22□□□□□ -1.57
UBI4YLL039C TIF6Q12522 245 aaKnown RBP5.22□□□□□ -1.57
UBI4YLL039C TPM1P17536 199 aaKnown RBP5.21□□□□□ -1.58
UBI4YLL039C MOT2P34909 587 aaKnown RBP5.21□□□□□ -1.58
UBI4YLL039C OCT1P35999 772 aa5.21□□□□□ -1.58
UBI4YLL039C MYO3P36006 1272 aa5.21□□□□□ -1.58
UBI4YLL039C KAE1P36132 386 aa5.21□□□□□ -1.58
UBI4YLL039C APE3P37302 537 aaKnown RBP5.21□□□□□ -1.58
UBI4YLL039C LDH1P38139 375 aa5.21□□□□□ -1.58
UBI4YLL039C CIC1P38779 376 aaKnown RBP5.21□□□□□ -1.58
UBI4YLL039C VPS8P39702 1274 aa5.21□□□□□ -1.58
UBI4YLL039C IRC24P40580 263 aa5.21□□□□□ -1.58
UBI4YLL039C SUB2Q07478 446 aaKnown RBP5.21□□□□□ -1.58
UBI4YLL039C MED7Q08278 222 aa5.21□□□□□ -1.58
UBI4YLL039C LAP2Q10740 671 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms