RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C NMD3P38861 518 aaKnown RBP2.94□□□□□ -1.94
UBP11YKR098C RPN3P40016 523 aaKnown RBP2.94□□□□□ -1.94
UBP11YKR098C YJL045WP47052 634 aa2.94□□□□□ -1.94
UBP11YKR098C HLJ1P48353 224 aa2.94□□□□□ -1.94
UBP11YKR098C LCD1Q04377 747 aa2.94□□□□□ -1.94
UBP11YKR098C YLR001CQ07895 862 aa2.94□□□□□ -1.94
UBP11YKR098C TY1A-NL1Q12391 440 aaKnown RBP2.94□□□□□ -1.94
UBP11YKR098C ADE8P04161 214 aa2.94□□□□□ -1.94
UBP11YKR098C RAD53P22216 821 aa2.94□□□□□ -1.94
UBP11YKR098C VBA3P25594 458 aa2.94□□□□□ -1.94
UBP11YKR098C GPT2P36148 743 aa2.94□□□□□ -1.94
UBP11YKR098C ERT1P38140 529 aa2.94□□□□□ -1.94
UBP11YKR098C DSS1P39112 969 aa2.94□□□□□ -1.94
UBP11YKR098C SEC26P41810 973 aaKnown RBP2.94□□□□□ -1.94
UBP11YKR098C YFL054CP43549 646 aa2.94□□□□□ -1.94
UBP11YKR098C ALG2P43636 503 aa2.94□□□□□ -1.94
UBP11YKR098C YGR237CP50089 785 aa2.94□□□□□ -1.94
UBP11YKR098C SRP1Q02821 542 aaKnown RBP2.94□□□□□ -1.94
UBP11YKR098C HPF1Q05164 967 aa2.94□□□□□ -1.94
UBP11YKR098C HRQ1Q05549 1077 aa2.94□□□□□ -1.94
UBP11YKR098C ACM1Q08981 209 aa2.94□□□□□ -1.94
UBP11YKR098C TOP1P04786 769 aa2.93□□□□□ -1.94
UBP11YKR098C PHR1P05066 565 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
UBP11YKR098C NPP1P25353 742 aa2.93□□□□□ -1.94
UBP11YKR098C YRO2P38079 344 aa2.93□□□□□ -1.94
UBP11YKR098C TOK1P40310 691 aa2.93□□□□□ -1.94
UBP11YKR098C ALT1P52893 592 aa2.93□□□□□ -1.94
UBP11YKR098C FOL1P53848 824 aa2.93□□□□□ -1.94
UBP11YKR098C HOS3Q02959 697 aaKnown RBP2.93□□□□□ -1.94
UBP11YKR098C THI73Q07904 523 aa2.93□□□□□ -1.94
UBP11YKR098C HRK1Q08732 759 aaKnown RBP2.93□□□□□ -1.94
UBP11YKR098C DPH6Q12429 685 aa2.93□□□□□ -1.94
UBP11YKR098C CDC9P04819 755 aa2.93□□□□□ -1.94
UBP11YKR098C GSY1P23337 708 aa2.93□□□□□ -1.94
UBP11YKR098C MRC1P25588 1096 aa2.93□□□□□ -1.94
UBP11YKR098C PRO1P32264 428 aa2.93□□□□□ -1.94
UBP11YKR098C YSC84P32793 468 aa2.93□□□□□ -1.94
UBP11YKR098C SPC29P33419 253 aa2.93□□□□□ -1.94
UBP11YKR098C UGA2P38067 497 aa2.93□□□□□ -1.94
UBP11YKR098C ENP1P38333 483 aaKnown RBP2.93□□□□□ -1.94
UBP11YKR098C SAH1P39954 449 aaKnown RBP2.93□□□□□ -1.94
UBP11YKR098C PMT3P47190 753 aa2.93□□□□□ -1.94
UBP11YKR098C GPG1P53130 126 aa2.93□□□□□ -1.94
UBP11YKR098C SRD1P09007 221 aa2.92□□□□□ -1.94
UBP11YKR098C SNF5P18480 905 aa2.92□□□□□ -1.94
UBP11YKR098C REC104P33323 182 aa2.92□□□□□ -1.94
UBP11YKR098C MDJ1P35191 511 aa2.92□□□□□ -1.94
UBP11YKR098C BAP2P38084 609 aa2.92□□□□□ -1.94
UBP11YKR098C GYP8P43570 497 aa2.92□□□□□ -1.94
UBP11YKR098C SDA1P53313 767 aaKnown RBP2.92□□□□□ -1.94
UBP11YKR098C UME1Q03010 460 aa2.92□□□□□ -1.94
UBP11YKR098C YOL057WQ08225 711 aa2.92□□□□□ -1.94
UBP11YKR098C PUS7Q08647 676 aaKnown RBP2.92□□□□□ -1.94
UBP11YKR098C NUP145P49687 1317 aa2.92□□□□□ -1.94
UBP11YKR098C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
UBP11YKR098C PCL2P25693 308 aa2.91□□□□□ -1.94
UBP11YKR098C TSL1P38427 1098 aaKnown RBP2.91□□□□□ -1.94
UBP11YKR098C NUG1P40010 520 aaKnown RBP2.91□□□□□ -1.94
UBP11YKR098C MGS1P40151 587 aa2.91□□□□□ -1.94
UBP11YKR098C TY4A-JP47023 414 aa2.91□□□□□ -1.94
UBP11YKR098C MTC3P53077 123 aa2.91□□□□□ -1.94
UBP11YKR098C YGR283CP53336 341 aaPredicted RBP2.91□□□□□ -1.94
UBP11YKR098C EAR1Q03212 550 aa2.91□□□□□ -1.94
UBP11YKR098C TPP1Q03796 238 aa2.91□□□□□ -1.94
UBP11YKR098C RCL1Q08096 367 aaPredicted RBP2.91□□□□□ -1.94
UBP11YKR098C GAS5Q08193 484 aa2.91□□□□□ -1.94
UBP11YKR098C YLL058WQ12198 575 aa2.91□□□□□ -1.94
UBP11YKR098C BI4P03879 638 aa2.91□□□□□ -1.94
UBP11YKR098C RPS4AP0CX35 261 aaKnown RBP2.91□□□□□ -1.94
UBP11YKR098C RPS4BP0CX36 261 aaKnown RBP2.91□□□□□ -1.94
UBP11YKR098C MTC2P34246 357 aa2.91□□□□□ -1.94
UBP11YKR098C BOI2P39969 1040 aa2.91□□□□□ -1.94
UBP11YKR098C CCM1P48237 864 aaPredicted RBP2.91□□□□□ -1.94
UBP11YKR098C TNA1P53322 534 aa2.91□□□□□ -1.94
UBP11YKR098C TMA17Q12513 150 aa2.91□□□□□ -1.94
UBP11YKR098C THS1P04801 734 aaKnown RBP2.9□□□□□ -1.94
UBP11YKR098C SFA1P32771 386 aa2.9□□□□□ -1.94
UBP11YKR098C GRX7P38068 203 aa2.9□□□□□ -1.94
UBP11YKR098C NPP2P39997 493 aa2.9□□□□□ -1.94
UBP11YKR098C YJR120WP47157 116 aa2.9□□□□□ -1.94
UBP11YKR098C BUD9P53226 547 aa2.9□□□□□ -1.94
UBP11YKR098C ALO1P54783 526 aaKnown RBP2.9□□□□□ -1.94
UBP11YKR098C MTC5Q03897 1148 aa2.9□□□□□ -1.94
UBP11YKR098C MDM38Q08179 573 aa2.9□□□□□ -1.94
UBP11YKR098C YEL1P34225 687 aa2.9□□□□□ -1.95
UBP11YKR098C EMC3P36039 253 aa2.9□□□□□ -1.95
UBP11YKR098C YKR078WP36158 585 aaKnown RBP2.9□□□□□ -1.95
UBP11YKR098C TPM2P40414 161 aa2.9□□□□□ -1.95
UBP11YKR098C SBE2P42223 864 aaKnown RBP2.9□□□□□ -1.95
UBP11YKR098C CAF16P43569 289 aa2.9□□□□□ -1.95
UBP11YKR098C GYP7P48365 746 aa2.9□□□□□ -1.95
UBP11YKR098C YKE2P52553 114 aa2.9□□□□□ -1.95
UBP11YKR098C PEX8P53248 589 aa2.9□□□□□ -1.95
UBP11YKR098C ATP25Q03153 612 aa2.9□□□□□ -1.95
UBP11YKR098C RSC3Q06639 885 aa2.9□□□□□ -1.95
UBP11YKR098C ENV7Q12003 364 aa2.9□□□□□ -1.95
UBP11YKR098C AI3P03877 415 aa2.89□□□□□ -1.95
UBP11YKR098C RAD18P10862 487 aa2.89□□□□□ -1.95
UBP11YKR098C SAM35P14693 329 aa2.89□□□□□ -1.95
UBP11YKR098C SFL1P20134 766 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 63 ms