RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	PMT7	Q06644	662 aa		7.75	□□□□□ -1.17
TIF1	YKR059W	CAN1	P04817	590 aa		7.74	□□□□□ -1.17
TIF1	YKR059W	DPB3	P27344	201 aa		7.74	□□□□□ -1.17
TIF1	YKR059W	RPL8B	P29453	256 aa	Known RBP	7.74	□□□□□ -1.17
TIF1	YKR059W	HLJ1	P48353	224 aa		7.74	□□□□□ -1.17
TIF1	YKR059W	CEF1	Q03654	590 aa	Predicted RBP	7.74	□□□□□ -1.17
TIF1	YKR059W	SHE9	Q04172	456 aa		7.74	□□□□□ -1.17
TIF1	YKR059W	ERR1	P0CX10	437 aa		7.73	□□□□□ -1.17
TIF1	YKR059W	ERR2	P0CX11	437 aa		7.73	□□□□□ -1.17
TIF1	YKR059W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.73	□□□□□ -1.17	not detected
TIF1	YKR059W	UGA4	P32837	571 aa		7.73	□□□□□ -1.17
TIF1	YKR059W	PMC1	P38929	1173 aa	Predicted RBP	7.73	□□□□□ -1.17
TIF1	YKR059W	PIC2	P40035	300 aa		7.73	□□□□□ -1.17
TIF1	YKR059W	BDP1	P46678	594 aa		7.73	□□□□□ -1.17
TIF1	YKR059W	RRP46	P53256	223 aa	Predicted RBP	7.73	□□□□□ -1.17
TIF1	YKR059W	YOR296W	Q08748	1289 aa		7.73	□□□□□ -1.17
TIF1	YKR059W	PRP9	P19736	530 aa	Known RBP	7.72	□□□□□ -1.17
TIF1	YKR059W	MSH2	P25847	964 aa		7.72	□□□□□ -1.17
TIF1	YKR059W	KRE2	P27809	442 aa		7.72	□□□□□ -1.17
TIF1	YKR059W	SBA1	P28707	216 aa	Known RBP	7.72	□□□□□ -1.17
TIF1	YKR059W	APL2	P36000	726 aa	Predicted RBP	7.72	□□□□□ -1.17
TIF1	YKR059W	SHU2	P38957	223 aa		7.72	□□□□□ -1.17
TIF1	YKR059W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	7.72	□□□□□ -1.17	not detected
TIF1	YKR059W	TRM44	Q02648	567 aa	Known RBP	7.72	□□□□□ -1.17
TIF1	YKR059W	SBP1	P10080	294 aa	Known RBP	7.71	□□□□□ -1.18
TIF1	YKR059W	SEC6	P32844	805 aa		7.71	□□□□□ -1.18
TIF1	YKR059W	MOT2	P34909	587 aa	Known RBP	7.71	□□□□□ -1.18
TIF1	YKR059W	PBY1	P38254	753 aa		7.71	□□□□□ -1.18
TIF1	YKR059W	POL5	P39985	1022 aa	Known RBP	7.71	□□□□□ -1.18
TIF1	YKR059W	AIR1	P40507	360 aa	Known RBP	7.71	□□□□□ -1.18
TIF1	YKR059W	ZDS1	P50111	915 aa	Known RBP	7.71	□□□□□ -1.18
TIF1	YKR059W	FOL1	P53848	824 aa		7.71	□□□□□ -1.18
TIF1	YKR059W	MSH6	Q03834	1242 aa		7.71	□□□□□ -1.18
TIF1	YKR059W	YDL124W	Q07551	312 aa	Known RBP	7.71	□□□□□ -1.18
TIF1	YKR059W	FMP25	Q08023	583 aa		7.71	□□□□□ -1.18
TIF1	YKR059W	RRG1	Q12167	365 aa	Predicted RBP	7.71	□□□□□ -1.18
TIF1	YKR059W	AHP1	P38013	176 aa	Known RBP	7.7	□□□□□ -1.18
TIF1	YKR059W	CLA4	P48562	842 aa		7.7	□□□□□ -1.18
TIF1	YKR059W	ITC1	P53125	1264 aa		7.7	□□□□□ -1.18
TIF1	YKR059W	YNL165W	P53891	406 aa		7.7	□□□□□ -1.18
TIF1	YKR059W	EEB1	Q02891	456 aa		7.7	□□□□□ -1.18
TIF1	YKR059W	DPH6	Q12429	685 aa		7.7	□□□□□ -1.18
TIF1	YKR059W	CSR2	Q12734	1121 aa		7.7	□□□□□ -1.18
TIF1	YKR059W	SAC3	P46674	1301 aa		7.7	□□□□□ -1.18
TIF1	YKR059W	RPL8A	P17076	256 aa	Known RBP	7.69	□□□□□ -1.18
TIF1	YKR059W	HPR1	P17629	752 aa	Known RBP	7.69	□□□□□ -1.18
TIF1	YKR059W	PMT3	P47190	753 aa		7.69	□□□□□ -1.18
TIF1	YKR059W	UGO1	Q03327	502 aa		7.69	□□□□□ -1.18
TIF1	YKR059W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.69	□□□□□ -1.18	not detected
TIF1	YKR059W	NTG2	Q08214	380 aa		7.69	□□□□□ -1.18
TIF1	YKR059W	TRP2	P00899	507 aa	Known RBP	7.68	□□□□□ -1.18
TIF1	YKR059W	LYP1	P32487	611 aa		7.68	□□□□□ -1.18
TIF1	YKR059W	AFG2	P32794	780 aa		7.68	□□□□□ -1.18
TIF1	YKR059W	STE5	P32917	917 aa		7.68	□□□□□ -1.18
TIF1	YKR059W	VBA5	P36172	582 aa		7.68	□□□□□ -1.18
TIF1	YKR059W	PEX28	P38848	579 aa		7.68	□□□□□ -1.18
TIF1	YKR059W	ICP55	P40051	511 aa		7.68	□□□□□ -1.18
TIF1	YKR059W	JJJ2	P46997	583 aa		7.68	□□□□□ -1.18
TIF1	YKR059W	YGR237C	P50089	785 aa		7.68	□□□□□ -1.18
TIF1	YKR059W	VPS4	P52917	437 aa		7.68	□□□□□ -1.18
TIF1	YKR059W	PEX13	P80667	386 aa		7.68	□□□□□ -1.18
TIF1	YKR059W	GSC2	P40989	1895 aa		7.67	□□□□□ -1.18
TIF1	YKR059W	PRD1	P25375	712 aa		7.67	□□□□□ -1.18
TIF1	YKR059W	PWP2	P25635	923 aa	Known RBP	7.67	□□□□□ -1.18
TIF1	YKR059W	APE3	P37302	537 aa	Known RBP	7.67	□□□□□ -1.18
TIF1	YKR059W	ENT3	P47160	408 aa		7.67	□□□□□ -1.18
TIF1	YKR059W	TPO2	P53283	614 aa		7.67	□□□□□ -1.18
TIF1	YKR059W	ECM16	Q04217	1267 aa	Known RBP	7.67	□□□□□ -1.18
TIF1	YKR059W	BMS1	Q08965	1183 aa	Known RBP	7.67	□□□□□ -1.18
TIF1	YKR059W	COQ4	O13525	335 aa		7.66	□□□□□ -1.18
TIF1	YKR059W	ABD1	P32783	436 aa	Predicted RBP	7.66	□□□□□ -1.18
TIF1	YKR059W	STV1	P37296	890 aa		7.66	□□□□□ -1.18
TIF1	YKR059W	ALR2	P43553	858 aa		7.66	□□□□□ -1.18
TIF1	YKR059W	HSV2	P50079	448 aa	Predicted RBP	7.66	□□□□□ -1.18
TIF1	YKR059W	UTP8	P53276	713 aa	Known RBP	7.66	□□□□□ -1.18
TIF1	YKR059W	CTR9	P89105	1077 aa		7.66	□□□□□ -1.18
TIF1	YKR059W	TFB2	Q02939	513 aa		7.66	□□□□□ -1.18
TIF1	YKR059W	VPS64	Q03944	604 aa		7.66	□□□□□ -1.18
TIF1	YKR059W	EMG1	Q06287	252 aa	Known RBP	7.66	□□□□□ -1.18
TIF1	YKR059W	GAS5	Q08193	484 aa		7.66	□□□□□ -1.18
TIF1	YKR059W	GIN4	Q12263	1142 aa		7.66	□□□□□ -1.18
TIF1	YKR059W	TMA7	Q3E764	64 aa	Known RBP	7.66	□□□□□ -1.18
TIF1	YKR059W	RPC31	P17890	251 aa		7.65	□□□□□ -1.18
TIF1	YKR059W	PYC2	P32327	1180 aa	Known RBP	7.65	□□□□□ -1.18
TIF1	YKR059W	PEX6	P33760	1030 aa		7.65	□□□□□ -1.18
TIF1	YKR059W	SIW14	P53965	281 aa		7.65	□□□□□ -1.18
TIF1	YKR059W	RBA50	Q04418	439 aa		7.65	□□□□□ -1.18
TIF1	YKR059W	SEC23	P15303	768 aa	Known RBP	7.64	□□□□□ -1.19
TIF1	YKR059W	IRE1	P32361	1115 aa		7.64	□□□□□ -1.19
TIF1	YKR059W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	7.64	□□□□□ -1.19	not detected
TIF1	YKR059W	VPS24	P36095	224 aa	Known RBP	7.64	□□□□□ -1.19
TIF1	YKR059W	SPL2	P38839	148 aa		7.64	□□□□□ -1.19
TIF1	YKR059W	RTR1	P40084	226 aa	Predicted RBP	7.64	□□□□□ -1.19
TIF1	YKR059W	DAS1	P47005	663 aa		7.64	□□□□□ -1.19
TIF1	YKR059W	PRP42	Q03776	544 aa	Known RBP	7.64	□□□□□ -1.19
TIF1	YKR059W	HDA2	Q06629	674 aa		7.64	□□□□□ -1.19
TIF1	YKR059W	GIC2	Q06648	383 aa		7.64	□□□□□ -1.19
TIF1	YKR059W	VPS13	Q07878	3144 aa		7.64	□□□□□ -1.19
TIF1	YKR059W	SSN3	P39073	555 aa		7.63	□□□□□ -1.19
TIF1	YKR059W	YIL165C	P40446	119 aa		7.63	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 91.1 ms