RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	EFB1	P32471	206 aa	Known RBP	3.77	□□□□□ -1.81
PEX1	YKL197C	SLA1	P32790	1244 aa		3.77	□□□□□ -1.81
PEX1	YKL197C	MKS1	P34072	584 aa		3.77	□□□□□ -1.81
PEX1	YKL197C	IES5	P40060	125 aa		3.77	□□□□□ -1.81
PEX1	YKL197C	HST3	P53687	447 aa		3.77	□□□□□ -1.81
PEX1	YKL197C	OPT2	Q06593	877 aa		3.77	□□□□□ -1.81
PEX1	YKL197C	ENV9	Q08651	330 aa		3.77	□□□□□ -1.81
PEX1	YKL197C	YIG1	Q08956	461 aa		3.77	□□□□□ -1.81
PEX1	YKL197C	YPR204W	Q08995	1032 aa		3.77	□□□□□ -1.81
PEX1	YKL197C	RAD3	P06839	778 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	PRP22	P24384	1145 aa	Known RBP	3.76	□□□□□ -1.81
PEX1	YKL197C	PUP1	P25043	261 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	URA1	P28272	314 aa	Predicted RBP	3.76	□□□□□ -1.81
PEX1	YKL197C	PAP1	P29468	568 aa	Known RBP	3.76	□□□□□ -1.81
PEX1	YKL197C	SFA1	P32771	386 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	PTH2	P34222	208 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	ENP2	P48234	707 aa	Known RBP	3.76	□□□□□ -1.81
PEX1	YKL197C	ADE12	P80210	433 aa	Known RBP	3.76	□□□□□ -1.81
PEX1	YKL197C	LCB5	Q06147	687 aa	Known RBP	3.76	□□□□□ -1.81
PEX1	YKL197C	GIC2	Q06648	383 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	NOB1	Q08444	459 aa	Known RBP	3.76	□□□□□ -1.81
PEX1	YKL197C	TCB1	Q12466	1186 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	HSM3	P38348	480 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
PEX1	YKL197C	YJR098C	P47139	656 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	NNF1	P47149	201 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	MSN5	P52918	1224 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	ZDS2	P54786	942 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	ARO80	Q04052	950 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	ERB1	Q04660	807 aa	Known RBP	3.76	□□□□□ -1.81
PEX1	YKL197C	YDR286C	Q05530	114 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	MAG2	Q06436	670 aa	Known RBP	3.76	□□□□□ -1.81
PEX1	YKL197C	RRI2	Q12348	645 aa		3.76	□□□□□ -1.81
PEX1	YKL197C	RPB4	P20433	221 aa	Predicted RBP	3.75	□□□□□ -1.81
PEX1	YKL197C	DAL80	P26343	269 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	TFC3	P34111	1160 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	PXA2	P34230	853 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	TMN3	P40071	706 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	MET18	P40469	1032 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	IST1	P53843	298 aa	Predicted RBP	3.75	□□□□□ -1.81
PEX1	YKL197C	VIP1	Q06685	1146 aa	Known RBP	3.75	□□□□□ -1.81
PEX1	YKL197C	TY1A-BL	Q12266	440 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	YOL098C	Q12496	1037 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	DSF1	P0CX08	502 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	YNR073C	P0CX09	502 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	PMS1	P14242	873 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	SLD2	P34252	453 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	CAJ1	P39101	391 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	FTR1	P40088	404 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	IOC3	P43596	787 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	ATG1	P53104	897 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	SVF1	Q05515	481 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	SWA2	Q06677	668 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	PLC1	P32383	869 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	HSE1	P38753	452 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	VID27	P40157	782 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	NUP85	P46673	744 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	ACS2	P52910	683 aa	Known RBP	3.75	□□□□□ -1.81
PEX1	YKL197C	TAF11	Q04226	346 aa		3.75	□□□□□ -1.81
PEX1	YKL197C	ATG38	Q05789	226 aa	Known RBP	3.75	□□□□□ -1.81
PEX1	YKL197C	ISA1	Q07821	250 aa	Predicted RBP	3.75	□□□□□ -1.81
PEX1	YKL197C	CCP1	P00431	361 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	RED1	P14291	827 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	YEL043W	P32618	956 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	MNR2	P35724	969 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	SHM1	P37292	490 aa	Predicted RBP	3.74	□□□□□ -1.81
PEX1	YKL197C	PEX18	P38855	283 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	NDC80	P40460	691 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	PXA1	P41909	870 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	ROM1	P53046	1155 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	HAS1	Q03532	505 aa	Known RBP	3.74	□□□□□ -1.81
PEX1	YKL197C	NNT1	Q05874	261 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	YOR352W	Q08816	343 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	IKI3	Q06706	1349 aa	Known RBP	3.74	□□□□□ -1.81
PEX1	YKL197C	TRP2	P00899	507 aa	Known RBP	3.74	□□□□□ -1.81
PEX1	YKL197C	RPS31	P05759	152 aa	Known RBP	3.74	□□□□□ -1.81
PEX1	YKL197C	CDC3	P32457	520 aa	Known RBP	3.74	□□□□□ -1.81
PEX1	YKL197C	MIA40	P36046	403 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	TGL4	P36165	910 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	UGA2	P38067	497 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	SMC2	P38989	1170 aa	Known RBP	3.74	□□□□□ -1.81
PEX1	YKL197C	DOT6	P40059	670 aa	Known RBP	3.74	□□□□□ -1.81
PEX1	YKL197C	IML2	P47031	731 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	NOP15	P53927	220 aa	Predicted RBP	3.74	□□□□□ -1.81
PEX1	YKL197C	BDF2	Q07442	638 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	WTM2	Q12206	467 aa		3.74	□□□□□ -1.81
PEX1	YKL197C	SSK22	P25390	1331 aa	Predicted RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	PIF1	P07271	859 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	ILS1	P09436	1072 aa	Known RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	SEN2	P16658	377 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	DIT1	P21623	536 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	CPS1	P27614	576 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	TPS2	P31688	896 aa	Known RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	SEC8	P32855	1065 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	YER156C	P40093	338 aa	Known RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	MAD1	P40957	749 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	BNA1	P47096	177 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	DCP2	P53550	970 aa	Known RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	YDR444W	Q04093	687 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	YOR378W	Q08902	515 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms