RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C GBP2P25555 427 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
YIR043CYIR043C SIT1P39980 628 aa6.99□□□□□ -1.29
YIR043CYIR043C RTS3P53289 263 aa6.99□□□□□ -1.29
YIR043CYIR043C LCD1Q04377 747 aa6.99□□□□□ -1.29
YIR043CYIR043C TY1A-NL1Q12391 440 aaKnown RBP6.99□□□□□ -1.29
YIR043CYIR043C MDM12Q92328 271 aa6.99□□□□□ -1.29
YIR043CYIR043C GSY1P23337 708 aa6.98□□□□□ -1.29
YIR043CYIR043C PRO1P32264 428 aa6.98□□□□□ -1.29
YIR043CYIR043C BOI2P39969 1040 aa6.98□□□□□ -1.29
YIR043CYIR043C RPN3P40016 523 aaKnown RBP6.98□□□□□ -1.29
YIR043CYIR043C ALG2P43636 503 aa6.98□□□□□ -1.29
YIR043CYIR043C YNL193WP53870 558 aa6.98□□□□□ -1.29
YIR043CYIR043C HOS3Q02959 697 aaKnown RBP6.98□□□□□ -1.29
YIR043CYIR043C TPP1Q03796 238 aa6.98□□□□□ -1.29
YIR043CYIR043C GAS5Q08193 484 aa6.98□□□□□ -1.29
YIR043CYIR043C ACM1Q08981 209 aa6.98□□□□□ -1.29
YIR043CYIR043C CDC12P32468 407 aaKnown RBP6.97□□□□□ -1.29
YIR043CYIR043C YNR014WP53719 212 aa6.97□□□□□ -1.29
YIR043CYIR043C PUS7Q08647 676 aaKnown RBP6.97□□□□□ -1.29
YIR043CYIR043C RPS4AP0CX35 261 aaKnown RBP6.96□□□□□ -1.3
YIR043CYIR043C RPS4BP0CX36 261 aaKnown RBP6.96□□□□□ -1.3
YIR043CYIR043C VBA3P25594 458 aa6.96□□□□□ -1.3
YIR043CYIR043C SLA2P33338 968 aa6.96□□□□□ -1.3
YIR043CYIR043C UGA2P38067 497 aa6.96□□□□□ -1.3
YIR043CYIR043C ERT1P38140 529 aa6.96□□□□□ -1.3
YIR043CYIR043C YFL054CP43549 646 aa6.96□□□□□ -1.3
YIR043CYIR043C ATG36P46983 293 aa6.96□□□□□ -1.3
YIR043CYIR043C YGR035CP53222 116 aa6.96□□□□□ -1.3
YIR043CYIR043C HRQ1Q05549 1077 aa6.96□□□□□ -1.3
YIR043CYIR043C NUP145P49687 1317 aa6.96□□□□□ -1.3
YIR043CYIR043C YSC84P32793 468 aa6.95□□□□□ -1.3
YIR043CYIR043C TOK1P40310 691 aa6.95□□□□□ -1.3
YIR043CYIR043C YGR237CP50089 785 aa6.95□□□□□ -1.3
YIR043CYIR043C TNA1P53322 534 aa6.95□□□□□ -1.3
YIR043CYIR043C YKL151CP36059 337 aa6.94□□□□□ -1.3
YIR043CYIR043C SBE2P42223 864 aaKnown RBP6.94□□□□□ -1.3
YIR043CYIR043C PMT3P47190 753 aa6.94□□□□□ -1.3
YIR043CYIR043C ALT1P52893 592 aa6.94□□□□□ -1.3
YIR043CYIR043C SDA1P53313 767 aaKnown RBP6.94□□□□□ -1.3
YIR043CYIR043C BUL2Q03758 920 aaKnown RBP6.94□□□□□ -1.3
YIR043CYIR043C NPP1P25353 742 aa6.93□□□□□ -1.3
YIR043CYIR043C AFR1P33304 620 aa6.93□□□□□ -1.3
YIR043CYIR043C REC104P33323 182 aa6.93□□□□□ -1.3
YIR043CYIR043C EAR1Q03212 550 aa6.93□□□□□ -1.3
YIR043CYIR043C MTC5Q03897 1148 aa6.93□□□□□ -1.3
YIR043CYIR043C THI73Q07904 523 aa6.93□□□□□ -1.3
YIR043CYIR043C COQ4O13525 335 aa6.92□□□□□ -1.3
YIR043CYIR043C THS1P04801 734 aaKnown RBP6.92□□□□□ -1.3
YIR043CYIR043C CDC9P04819 755 aa6.92□□□□□ -1.3
YIR043CYIR043C RSC6P25632 483 aa6.92□□□□□ -1.3
YIR043CYIR043C SEC26P41810 973 aaKnown RBP6.92□□□□□ -1.3
YIR043CYIR043C FOL1P53848 824 aa6.92□□□□□ -1.3
YIR043CYIR043C YLR001CQ07895 862 aa6.92□□□□□ -1.3
YIR043CYIR043C AI1P03875 834 aa6.91□□□□□ -1.3
YIR043CYIR043C SFA1P32771 386 aa6.91□□□□□ -1.3
YIR043CYIR043C SPC29P33419 253 aa6.91□□□□□ -1.3
YIR043CYIR043C MDJ1P35191 511 aa6.91□□□□□ -1.3
YIR043CYIR043C GRX7P38068 203 aa6.91□□□□□ -1.3
YIR043CYIR043C CCM1P48237 864 aaPredicted RBP6.91□□□□□ -1.3
YIR043CYIR043C BUD9P53226 547 aa6.91□□□□□ -1.3
YIR043CYIR043C ALO1P54783 526 aaKnown RBP6.91□□□□□ -1.3
YIR043CYIR043C UME1Q03010 460 aa6.91□□□□□ -1.3
YIR043CYIR043C RAD18P10862 487 aa6.9□□□□□ -1.3
YIR043CYIR043C SNF5P18480 905 aa6.9□□□□□ -1.3
YIR043CYIR043C GYP8P43570 497 aa6.9□□□□□ -1.3
YIR043CYIR043C RCL1Q08096 367 aaPredicted RBP6.9□□□□□ -1.3
YIR043CYIR043C BI4P03879 638 aa6.89□□□□□ -1.31
YIR043CYIR043C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
YIR043CYIR043C MRC1P25588 1096 aa6.89□□□□□ -1.31
YIR043CYIR043C YGR283CP53336 341 aaPredicted RBP6.89□□□□□ -1.31
YIR043CYIR043C MDM38Q08179 573 aa6.89□□□□□ -1.31
YIR043CYIR043C YOL057WQ08225 711 aa6.89□□□□□ -1.31
YIR043CYIR043C TMA17Q12513 150 aa6.89□□□□□ -1.31
YIR043CYIR043C SRD1P09007 221 aa6.88□□□□□ -1.31
YIR043CYIR043C CCZ1P38273 704 aa6.88□□□□□ -1.31
YIR043CYIR043C YBR238CP38330 731 aaKnown RBP6.88□□□□□ -1.31
YIR043CYIR043C YHL012WP38709 493 aa6.88□□□□□ -1.31
YIR043CYIR043C DAM1P53267 343 aa6.88□□□□□ -1.31
YIR043CYIR043C FAP7Q12055 197 aaPredicted RBP6.88□□□□□ -1.31
YIR043CYIR043C YLL058WQ12198 575 aa6.88□□□□□ -1.31
YIR043CYIR043C EMC3P36039 253 aa6.87□□□□□ -1.31
YIR043CYIR043C TYS1P36421 394 aaKnown RBP6.87□□□□□ -1.31
YIR043CYIR043C BAP2P38084 609 aa6.87□□□□□ -1.31
YIR043CYIR043C PAF1P38351 445 aa6.87□□□□□ -1.31
YIR043CYIR043C TSL1P38427 1098 aaKnown RBP6.87□□□□□ -1.31
YIR043CYIR043C PIK1P39104 1066 aa6.87□□□□□ -1.31
YIR043CYIR043C GYP7P48365 746 aa6.87□□□□□ -1.31
YIR043CYIR043C NIT3P49954 291 aa6.87□□□□□ -1.31
YIR043CYIR043C ENV7Q12003 364 aa6.87□□□□□ -1.31
YIR043CYIR043C AI3P03877 415 aa6.86□□□□□ -1.31
YIR043CYIR043C YER158CP40095 573 aa6.86□□□□□ -1.31
YIR043CYIR043C GPG1P53130 126 aa6.86□□□□□ -1.31
YIR043CYIR043C YDR514CQ04408 483 aa6.86□□□□□ -1.31
YIR043CYIR043C YPR196WQ06595 470 aa6.86□□□□□ -1.31
YIR043CYIR043C RSB1Q08417 382 aa6.86□□□□□ -1.31
YIR043CYIR043C THI72Q08579 599 aa6.86□□□□□ -1.31
YIR043CYIR043C MET7Q08645 548 aa6.86□□□□□ -1.31
YIR043CYIR043C YVC1Q12324 675 aa6.86□□□□□ -1.31
YIR043CYIR043C CDC48P25694 835 aaKnown RBP6.85□□□□□ -1.31
YIR043CYIR043C NAM7P30771 971 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms