RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDX1	YGR193C	YHR218W	P38899	603 aa		4.17	□□□□□ -1.74
PDX1	YGR193C	FOL2	P51601	243 aa	Known RBP	4.17	□□□□□ -1.74
PDX1	YGR193C	YNR063W	P53749	607 aa		4.17	□□□□□ -1.74
PDX1	YGR193C	YNL058C	P53947	316 aa		4.17	□□□□□ -1.74
PDX1	YGR193C	PEX13	P80667	386 aa		4.17	□□□□□ -1.74
PDX1	YGR193C	SVL3	Q03088	825 aa	Known RBP	4.17	□□□□□ -1.74
PDX1	YGR193C	YPR172W	Q06608	200 aa		4.17	□□□□□ -1.74
PDX1	YGR193C	ETT1	Q08421	412 aa	Known RBP	4.17	□□□□□ -1.74
PDX1	YGR193C	YBL113C	Q7M4S9	792 aa		4.17	□□□□□ -1.74
PDX1	YGR193C	THS1	P04801	734 aa	Known RBP	4.16	□□□□□ -1.74
PDX1	YGR193C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
PDX1	YGR193C	TRX2	P22803	104 aa	Known RBP	4.16	□□□□□ -1.74
PDX1	YGR193C	PPH3	P32345	308 aa		4.16	□□□□□ -1.74
PDX1	YGR193C	SEC6	P32844	805 aa		4.16	□□□□□ -1.74
PDX1	YGR193C	PEX5	P35056	612 aa		4.16	□□□□□ -1.74
PDX1	YGR193C	ABZ1	P37254	787 aa	Predicted RBP	4.16	□□□□□ -1.74
PDX1	YGR193C	SHM2	P37291	469 aa	Known RBP	4.16	□□□□□ -1.74
PDX1	YGR193C	GRX7	P38068	203 aa		4.16	□□□□□ -1.74
PDX1	YGR193C	YMR124W	P39523	943 aa	Known RBP	4.16	□□□□□ -1.74
PDX1	YGR193C	MEP1	P40260	492 aa		4.16	□□□□□ -1.74
PDX1	YGR193C	ALG12	P53730	551 aa		4.16	□□□□□ -1.74
PDX1	YGR193C	YDR132C	Q03900	495 aa		4.16	□□□□□ -1.74
PDX1	YGR193C	SXM1	Q04175	944 aa	Known RBP	4.16	□□□□□ -1.74
PDX1	YGR193C	RCL1	Q08096	367 aa	Predicted RBP	4.16	□□□□□ -1.74
PDX1	YGR193C	HRK1	Q08732	759 aa	Known RBP	4.16	□□□□□ -1.74
PDX1	YGR193C	SRO9	P25567	434 aa	Known RBP	4.15	□□□□□ -1.75
PDX1	YGR193C	RPL5	P26321	297 aa	Known RBP	4.15	□□□□□ -1.75
PDX1	YGR193C	FUI1	P38196	639 aa		4.15	□□□□□ -1.75
PDX1	YGR193C	SAM37	P50110	327 aa		4.15	□□□□□ -1.75
PDX1	YGR193C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
PDX1	YGR193C	RRP9	Q06506	573 aa	Known RBP	4.15	□□□□□ -1.75
PDX1	YGR193C	RSC58	Q07979	502 aa		4.15	□□□□□ -1.75
PDX1	YGR193C	YLR358C	O13565	187 aa		4.14	□□□□□ -1.75
PDX1	YGR193C	CIT2	P08679	460 aa		4.14	□□□□□ -1.75
PDX1	YGR193C	HEM13	P11353	328 aa	Known RBP	4.14	□□□□□ -1.75
PDX1	YGR193C	PRP40	P33203	583 aa	Known RBP	4.14	□□□□□ -1.75
PDX1	YGR193C	HSE1	P38753	452 aa		4.14	□□□□□ -1.75
PDX1	YGR193C	QNS1	P38795	714 aa	Known RBP	4.14	□□□□□ -1.75
PDX1	YGR193C	AIM20	P40451	204 aa		4.14	□□□□□ -1.75
PDX1	YGR193C	VTC3	Q02725	835 aa		4.14	□□□□□ -1.75
PDX1	YGR193C	PHM6	Q05637	104 aa		4.14	□□□□□ -1.75
PDX1	YGR193C	TOS4	Q06266	489 aa		4.14	□□□□□ -1.75
PDX1	YGR193C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
PDX1	YGR193C	SRP40	P32583	406 aa	Predicted RBP	4.13	□□□□□ -1.75
PDX1	YGR193C	ANP1	P32629	500 aa		4.13	□□□□□ -1.75
PDX1	YGR193C	YSC84	P32793	468 aa		4.13	□□□□□ -1.75
PDX1	YGR193C	RPC37	P36121	282 aa		4.13	□□□□□ -1.75
PDX1	YGR193C	JNM1	P36224	373 aa		4.13	□□□□□ -1.75
PDX1	YGR193C	CIC1	P38779	376 aa	Known RBP	4.13	□□□□□ -1.75
PDX1	YGR193C	KEL2	P50090	882 aa		4.13	□□□□□ -1.75
PDX1	YGR193C	TAN1	P53072	289 aa	Predicted RBP	4.13	□□□□□ -1.75
PDX1	YGR193C	YNL247W	P53852	767 aa	Known RBP	4.13	□□□□□ -1.75
PDX1	YGR193C	TIM11	P81449	96 aa	Predicted RBP	4.13	□□□□□ -1.75
PDX1	YGR193C	ULP1	Q02724	621 aa		4.13	□□□□□ -1.75
PDX1	YGR193C	RIX7	Q07844	837 aa	Known RBP	4.13	□□□□□ -1.75
PDX1	YGR193C	GRC3	Q07845	632 aa		4.13	□□□□□ -1.75
PDX1	YGR193C	LAP2	Q10740	671 aa		4.13	□□□□□ -1.75
PDX1	YGR193C	RUD3	Q12234	484 aa	Known RBP	4.13	□□□□□ -1.75
PDX1	YGR193C	HAT1	Q12341	374 aa		4.13	□□□□□ -1.75
PDX1	YGR193C	NOP14	Q99207	810 aa	Known RBP	4.13	□□□□□ -1.75
PDX1	YGR193C	CHD1	P32657	1468 aa		4.12	□□□□□ -1.75
PDX1	YGR193C	FOB1	O13329	566 aa		4.12	□□□□□ -1.75
PDX1	YGR193C	SPS1	P08458	490 aa		4.12	□□□□□ -1.75
PDX1	YGR193C	KRR1	P25586	316 aa	Predicted RBP	4.12	□□□□□ -1.75
PDX1	YGR193C	AFG2	P32794	780 aa		4.12	□□□□□ -1.75
PDX1	YGR193C	RDH54	P38086	958 aa		4.12	□□□□□ -1.75
PDX1	YGR193C	PEX28	P38848	579 aa		4.12	□□□□□ -1.75
PDX1	YGR193C	RSM26	P47141	266 aa		4.12	□□□□□ -1.75
PDX1	YGR193C	VID30	P53076	958 aa		4.12	□□□□□ -1.75
PDX1	YGR193C	GGA1	Q06336	557 aa		4.12	□□□□□ -1.75
PDX1	YGR193C	DBP10	Q12389	995 aa	Known RBP	4.12	□□□□□ -1.75
PDX1	YGR193C	RTP1	Q12751	981 aa		4.12	□□□□□ -1.75
PDX1	YGR193C	DEP1	P31385	405 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	LTV1	P34078	463 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	RRN3	P36070	627 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	UBP12	P39538	1254 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	SPT20	P50875	604 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	OCA1	P50946	238 aa	Predicted RBP	4.11	□□□□□ -1.75
PDX1	YGR193C	HUL5	P53119	910 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	YGR021W	P53212	290 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	GCN5	Q03330	439 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	VTI1	Q04338	217 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	COG8	Q04632	607 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	DAL4	Q04895	635 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	RRP15	Q06511	250 aa	Predicted RBP	4.11	□□□□□ -1.75
PDX1	YGR193C	YGR161W-C	Q3E744	92 aa		4.11	□□□□□ -1.75
PDX1	YGR193C	TUB2	P02557	457 aa	Known RBP	4.1	□□□□□ -1.75
PDX1	YGR193C	MEF1	P25039	761 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	MRC1	P25588	1096 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	ARC19	P33204	171 aa	Known RBP	4.1	□□□□□ -1.75
PDX1	YGR193C	YKL091C	P33324	310 aa	Known RBP	4.1	□□□□□ -1.75
PDX1	YGR193C	NIP100	P33420	868 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	SQT1	P35184	431 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	SAP190	P36123	1033 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	IPL1	P38991	367 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	GPB2	P39717	880 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	TIM54	P47045	478 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	UTP14	Q04500	899 aa	Known RBP	4.1	□□□□□ -1.75
PDX1	YGR193C	SGD1	Q06132	899 aa		4.1	□□□□□ -1.75
PDX1	YGR193C	CDC45	Q08032	650 aa		4.1	□□□□□ -1.75

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