RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YHR218WP38899 603 aa4.17□□□□□ -1.74
PDX1YGR193C FOL2P51601 243 aaKnown RBP4.17□□□□□ -1.74
PDX1YGR193C YNR063WP53749 607 aa4.17□□□□□ -1.74
PDX1YGR193C YNL058CP53947 316 aa4.17□□□□□ -1.74
PDX1YGR193C PEX13P80667 386 aa4.17□□□□□ -1.74
PDX1YGR193C SVL3Q03088 825 aaKnown RBP4.17□□□□□ -1.74
PDX1YGR193C YPR172WQ06608 200 aa4.17□□□□□ -1.74
PDX1YGR193C ETT1Q08421 412 aaKnown RBP4.17□□□□□ -1.74
PDX1YGR193C YBL113CQ7M4S9 792 aa4.17□□□□□ -1.74
PDX1YGR193C THS1P04801 734 aaKnown RBP4.16□□□□□ -1.74
PDX1YGR193C PRE10P21242 288 aaKnown RBP RIP-Chip data4.16□□□□□ -1.74not detected
PDX1YGR193C TRX2P22803 104 aaKnown RBP4.16□□□□□ -1.74
PDX1YGR193C PPH3P32345 308 aa4.16□□□□□ -1.74
PDX1YGR193C SEC6P32844 805 aa4.16□□□□□ -1.74
PDX1YGR193C PEX5P35056 612 aa4.16□□□□□ -1.74
PDX1YGR193C ABZ1P37254 787 aaPredicted RBP4.16□□□□□ -1.74
PDX1YGR193C SHM2P37291 469 aaKnown RBP4.16□□□□□ -1.74
PDX1YGR193C GRX7P38068 203 aa4.16□□□□□ -1.74
PDX1YGR193C YMR124WP39523 943 aaKnown RBP4.16□□□□□ -1.74
PDX1YGR193C MEP1P40260 492 aa4.16□□□□□ -1.74
PDX1YGR193C ALG12P53730 551 aa4.16□□□□□ -1.74
PDX1YGR193C YDR132CQ03900 495 aa4.16□□□□□ -1.74
PDX1YGR193C SXM1Q04175 944 aaKnown RBP4.16□□□□□ -1.74
PDX1YGR193C RCL1Q08096 367 aaPredicted RBP4.16□□□□□ -1.74
PDX1YGR193C HRK1Q08732 759 aaKnown RBP4.16□□□□□ -1.74
PDX1YGR193C SRO9P25567 434 aaKnown RBP4.15□□□□□ -1.75
PDX1YGR193C RPL5P26321 297 aaKnown RBP4.15□□□□□ -1.75
PDX1YGR193C FUI1P38196 639 aa4.15□□□□□ -1.75
PDX1YGR193C SAM37P50110 327 aa4.15□□□□□ -1.75
PDX1YGR193C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
PDX1YGR193C RRP9Q06506 573 aaKnown RBP4.15□□□□□ -1.75
PDX1YGR193C RSC58Q07979 502 aa4.15□□□□□ -1.75
PDX1YGR193C YLR358CO13565 187 aa4.14□□□□□ -1.75
PDX1YGR193C CIT2P08679 460 aa4.14□□□□□ -1.75
PDX1YGR193C HEM13P11353 328 aaKnown RBP4.14□□□□□ -1.75
PDX1YGR193C PRP40P33203 583 aaKnown RBP4.14□□□□□ -1.75
PDX1YGR193C HSE1P38753 452 aa4.14□□□□□ -1.75
PDX1YGR193C QNS1P38795 714 aaKnown RBP4.14□□□□□ -1.75
PDX1YGR193C AIM20P40451 204 aa4.14□□□□□ -1.75
PDX1YGR193C VTC3Q02725 835 aa4.14□□□□□ -1.75
PDX1YGR193C PHM6Q05637 104 aa4.14□□□□□ -1.75
PDX1YGR193C TOS4Q06266 489 aa4.14□□□□□ -1.75
PDX1YGR193C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
PDX1YGR193C SRP40P32583 406 aaPredicted RBP4.13□□□□□ -1.75
PDX1YGR193C ANP1P32629 500 aa4.13□□□□□ -1.75
PDX1YGR193C YSC84P32793 468 aa4.13□□□□□ -1.75
PDX1YGR193C RPC37P36121 282 aa4.13□□□□□ -1.75
PDX1YGR193C JNM1P36224 373 aa4.13□□□□□ -1.75
PDX1YGR193C CIC1P38779 376 aaKnown RBP4.13□□□□□ -1.75
PDX1YGR193C KEL2P50090 882 aa4.13□□□□□ -1.75
PDX1YGR193C TAN1P53072 289 aaPredicted RBP4.13□□□□□ -1.75
PDX1YGR193C YNL247WP53852 767 aaKnown RBP4.13□□□□□ -1.75
PDX1YGR193C TIM11P81449 96 aaPredicted RBP4.13□□□□□ -1.75
PDX1YGR193C ULP1Q02724 621 aa4.13□□□□□ -1.75
PDX1YGR193C RIX7Q07844 837 aaKnown RBP4.13□□□□□ -1.75
PDX1YGR193C GRC3Q07845 632 aa4.13□□□□□ -1.75
PDX1YGR193C LAP2Q10740 671 aa4.13□□□□□ -1.75
PDX1YGR193C RUD3Q12234 484 aaKnown RBP4.13□□□□□ -1.75
PDX1YGR193C HAT1Q12341 374 aa4.13□□□□□ -1.75
PDX1YGR193C NOP14Q99207 810 aaKnown RBP4.13□□□□□ -1.75
PDX1YGR193C CHD1P32657 1468 aa4.12□□□□□ -1.75
PDX1YGR193C FOB1O13329 566 aa4.12□□□□□ -1.75
PDX1YGR193C SPS1P08458 490 aa4.12□□□□□ -1.75
PDX1YGR193C KRR1P25586 316 aaPredicted RBP4.12□□□□□ -1.75
PDX1YGR193C AFG2P32794 780 aa4.12□□□□□ -1.75
PDX1YGR193C RDH54P38086 958 aa4.12□□□□□ -1.75
PDX1YGR193C PEX28P38848 579 aa4.12□□□□□ -1.75
PDX1YGR193C RSM26P47141 266 aa4.12□□□□□ -1.75
PDX1YGR193C VID30P53076 958 aa4.12□□□□□ -1.75
PDX1YGR193C GGA1Q06336 557 aa4.12□□□□□ -1.75
PDX1YGR193C DBP10Q12389 995 aaKnown RBP4.12□□□□□ -1.75
PDX1YGR193C RTP1Q12751 981 aa4.12□□□□□ -1.75
PDX1YGR193C DEP1P31385 405 aa4.11□□□□□ -1.75
PDX1YGR193C LTV1P34078 463 aa4.11□□□□□ -1.75
PDX1YGR193C RRN3P36070 627 aa4.11□□□□□ -1.75
PDX1YGR193C UBP12P39538 1254 aa4.11□□□□□ -1.75
PDX1YGR193C SPT20P50875 604 aa4.11□□□□□ -1.75
PDX1YGR193C OCA1P50946 238 aaPredicted RBP4.11□□□□□ -1.75
PDX1YGR193C HUL5P53119 910 aa4.11□□□□□ -1.75
PDX1YGR193C YGR021WP53212 290 aa4.11□□□□□ -1.75
PDX1YGR193C GCN5Q03330 439 aa4.11□□□□□ -1.75
PDX1YGR193C VTI1Q04338 217 aa4.11□□□□□ -1.75
PDX1YGR193C COG8Q04632 607 aa4.11□□□□□ -1.75
PDX1YGR193C DAL4Q04895 635 aa4.11□□□□□ -1.75
PDX1YGR193C RRP15Q06511 250 aaPredicted RBP4.11□□□□□ -1.75
PDX1YGR193C YGR161W-CQ3E744 92 aa4.11□□□□□ -1.75
PDX1YGR193C TUB2P02557 457 aaKnown RBP4.1□□□□□ -1.75
PDX1YGR193C MEF1P25039 761 aa4.1□□□□□ -1.75
PDX1YGR193C MRC1P25588 1096 aa4.1□□□□□ -1.75
PDX1YGR193C ARC19P33204 171 aaKnown RBP4.1□□□□□ -1.75
PDX1YGR193C YKL091CP33324 310 aaKnown RBP4.1□□□□□ -1.75
PDX1YGR193C NIP100P33420 868 aa4.1□□□□□ -1.75
PDX1YGR193C SQT1P35184 431 aa4.1□□□□□ -1.75
PDX1YGR193C SAP190P36123 1033 aa4.1□□□□□ -1.75
PDX1YGR193C IPL1P38991 367 aa4.1□□□□□ -1.75
PDX1YGR193C GPB2P39717 880 aa4.1□□□□□ -1.75
PDX1YGR193C TIM54P47045 478 aa4.1□□□□□ -1.75
PDX1YGR193C UTP14Q04500 899 aaKnown RBP4.1□□□□□ -1.75
PDX1YGR193C SGD1Q06132 899 aa4.1□□□□□ -1.75
PDX1YGR193C CDC45Q08032 650 aa4.1□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms