RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W MIA40P36046 403 aa6.33□□□□□ -1.4
SKN1YGR143W PAM1P37304 830 aaKnown RBP6.33□□□□□ -1.4
SKN1YGR143W DAS1P47005 663 aa6.33□□□□□ -1.4
SKN1YGR143W SSL2Q00578 843 aa6.33□□□□□ -1.4
SKN1YGR143W KIN4Q01919 800 aa6.33□□□□□ -1.4
SKN1YGR143W RPN4Q03465 531 aa6.33□□□□□ -1.4
SKN1YGR143W NSE3Q05541 303 aa6.33□□□□□ -1.4
SKN1YGR143W DBP9Q06218 594 aaKnown RBP6.33□□□□□ -1.4
SKN1YGR143W SPP382Q06411 708 aaPredicted RBP6.33□□□□□ -1.4
SKN1YGR143W YPL277CQ08989 487 aa6.33□□□□□ -1.4
SKN1YGR143W KRS1P15180 591 aaKnown RBP6.33□□□□□ -1.4
SKN1YGR143W YEL043WP32618 956 aa6.33□□□□□ -1.4
SKN1YGR143W BUD2P33314 1104 aa6.33□□□□□ -1.4
SKN1YGR143W HSP78P33416 811 aa6.33□□□□□ -1.4
SKN1YGR143W RGD1P38339 666 aa6.33□□□□□ -1.4
SKN1YGR143W ESL1P40456 1118 aa6.33□□□□□ -1.4
SKN1YGR143W RRT14P40470 206 aa6.33□□□□□ -1.4
SKN1YGR143W SGM1P47166 707 aa6.33□□□□□ -1.4
SKN1YGR143W ESBP6P53918 673 aa6.33□□□□□ -1.4
SKN1YGR143W SFB2P53953 876 aa6.33□□□□□ -1.4
SKN1YGR143W SYF1Q04048 859 aaPredicted RBP6.33□□□□□ -1.4
SKN1YGR143W RNH1Q04740 348 aa6.33□□□□□ -1.4
SKN1YGR143W TAF3Q12297 353 aa6.33□□□□□ -1.4
SKN1YGR143W YOL098CQ12496 1037 aa6.33□□□□□ -1.4
SKN1YGR143W HTZ1Q12692 134 aaKnown RBP6.33□□□□□ -1.4
SKN1YGR143W TEF1P02994 458 aaKnown RBP6.32□□□□□ -1.4
SKN1YGR143W HCA4P20448 770 aaKnown RBP6.32□□□□□ -1.4
SKN1YGR143W VPH2P32341 215 aa6.32□□□□□ -1.4
SKN1YGR143W RTG2P32608 588 aaKnown RBP6.32□□□□□ -1.4
SKN1YGR143W PXA2P34230 853 aa6.32□□□□□ -1.4
SKN1YGR143W ERT1P38140 529 aa6.32□□□□□ -1.4
SKN1YGR143W RVS167P39743 482 aaKnown RBP6.32□□□□□ -1.4
SKN1YGR143W PHB1P40961 287 aa6.32□□□□□ -1.4
SKN1YGR143W CTK3P46963 296 aaPredicted RBP6.32□□□□□ -1.4
SKN1YGR143W SNX4P47057 423 aa6.32□□□□□ -1.4
SKN1YGR143W SSN8P47821 323 aa6.32□□□□□ -1.4
SKN1YGR143W EFM5P53200 248 aaKnown RBP6.32□□□□□ -1.4
SKN1YGR143W HEF3P53978 1044 aaKnown RBP6.32□□□□□ -1.4
SKN1YGR143W SEC5P89102 971 aa6.32□□□□□ -1.4
SKN1YGR143W YKU80Q04437 629 aa6.32□□□□□ -1.4
SKN1YGR143W SSP2Q08646 371 aa6.32□□□□□ -1.4
SKN1YGR143W RRP36Q12481 300 aaPredicted RBP6.32□□□□□ -1.4
SKN1YGR143W LPD1P09624 499 aaKnown RBP6.32□□□□□ -1.4
SKN1YGR143W SRS2P12954 1174 aa6.32□□□□□ -1.4
SKN1YGR143W TUP1P16649 713 aa6.32□□□□□ -1.4
SKN1YGR143W TPS2P31688 896 aaKnown RBP6.32□□□□□ -1.4
SKN1YGR143W YBR242WP38331 238 aa6.32□□□□□ -1.4
SKN1YGR143W YHR020WP38708 688 aaKnown RBP6.32□□□□□ -1.4
SKN1YGR143W CIR1P42940 261 aa6.32□□□□□ -1.4
SKN1YGR143W HST1P53685 503 aa6.32□□□□□ -1.4
SKN1YGR143W CTT1P06115 562 aa6.31□□□□□ -1.4
SKN1YGR143W PMS1P14242 873 aa6.31□□□□□ -1.4
SKN1YGR143W KGD2P19262 463 aaPredicted RBP6.31□□□□□ -1.4
SKN1YGR143W CLB4P24871 460 aa6.31□□□□□ -1.4
SKN1YGR143W ECM32P32644 1121 aaKnown RBP6.31□□□□□ -1.4
SKN1YGR143W UBC6P33296 250 aaPredicted RBP6.31□□□□□ -1.4
SKN1YGR143W YKL222CP35995 705 aa6.31□□□□□ -1.4
SKN1YGR143W RGA1P39083 1007 aa6.31□□□□□ -1.4
SKN1YGR143W STB1P42845 420 aa6.31□□□□□ -1.4
SKN1YGR143W MCP2Q06567 569 aa6.31□□□□□ -1.4
SKN1YGR143W IRC3Q06683 689 aa6.31□□□□□ -1.4
SKN1YGR143W YOR296WQ08748 1289 aa6.31□□□□□ -1.4
SKN1YGR143W YPR204WQ08995 1032 aa6.31□□□□□ -1.4
SKN1YGR143W YRM1Q12340 786 aa6.31□□□□□ -1.4
SKN1YGR143W LYS2P07702 1392 aa6.31□□□□□ -1.4
SKN1YGR143W RIB7P33312 244 aa6.31□□□□□ -1.4
SKN1YGR143W STE13P33894 931 aa6.31□□□□□ -1.4
SKN1YGR143W SET1P38827 1080 aaKnown RBP6.31□□□□□ -1.4
SKN1YGR143W YER156CP40093 338 aaKnown RBP6.31□□□□□ -1.4
SKN1YGR143W MET12P46151 657 aa6.31□□□□□ -1.4
SKN1YGR143W RBL2P48606 106 aaKnown RBP6.31□□□□□ -1.4
SKN1YGR143W YAF9P53930 226 aa6.31□□□□□ -1.4
SKN1YGR143W CEG1Q01159 459 aaPredicted RBP6.31□□□□□ -1.4
SKN1YGR143W DML1Q03652 475 aa6.31□□□□□ -1.4
SKN1YGR143W CWC15Q03772 175 aaKnown RBP6.31□□□□□ -1.4
SKN1YGR143W VPS64Q03944 604 aa6.31□□□□□ -1.4
SKN1YGR143W DPL1Q05567 589 aa6.31□□□□□ -1.4
SKN1YGR143W ABP140Q08641 628 aaKnown RBP6.31□□□□□ -1.4
SKN1YGR143W CAF20P12962 161 aaKnown RBP6.3□□□□□ -1.4
SKN1YGR143W RSR1P13856 272 aa6.3□□□□□ -1.4
SKN1YGR143W NPL6P32832 435 aa6.3□□□□□ -1.4
SKN1YGR143W RPC34P32910 317 aa6.3□□□□□ -1.4
SKN1YGR143W TFC4P33339 1025 aa6.3□□□□□ -1.4
SKN1YGR143W UIP5P36137 443 aa6.3□□□□□ -1.4
SKN1YGR143W YHB1P39676 399 aaKnown RBP6.3□□□□□ -1.4
SKN1YGR143W UBP15P50101 1230 aa6.3□□□□□ -1.4
SKN1YGR143W DCS1Q06151 350 aa6.3□□□□□ -1.4
SKN1YGR143W DSF1P0CX08 502 aa6.3□□□□□ -1.4
SKN1YGR143W YNR073CP0CX09 502 aa6.3□□□□□ -1.4
SKN1YGR143W KAR1P11927 433 aa6.3□□□□□ -1.4
SKN1YGR143W SEC21P32074 935 aaKnown RBP6.3□□□□□ -1.4
SKN1YGR143W ANP1P32629 500 aa6.3□□□□□ -1.4
SKN1YGR143W ATO2P32907 282 aa6.3□□□□□ -1.4
SKN1YGR143W SAS3P34218 831 aa6.3□□□□□ -1.4
SKN1YGR143W SLX1P38324 304 aa6.3□□□□□ -1.4
SKN1YGR143W YEL023CP39992 682 aa6.3□□□□□ -1.4
SKN1YGR143W APS3P47064 194 aa6.3□□□□□ -1.4
SKN1YGR143W UBA2P52488 636 aa6.3□□□□□ -1.4
SKN1YGR143W SHE10P53075 577 aa6.3□□□□□ -1.4
SKN1YGR143W GCR2Q01722 534 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms