RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C LSO2Q3E772 92 aaKnown RBP4.83□□□□□ -1.64
PRP28YDR243C GEA2P39993 1459 aaKnown RBP4.83□□□□□ -1.64
PRP28YDR243C RPB4P20433 221 aaPredicted RBP4.83□□□□□ -1.64
PRP28YDR243C KCC4P25389 1037 aa4.83□□□□□ -1.64
PRP28YDR243C RPC34P32910 317 aa4.83□□□□□ -1.64
PRP28YDR243C RIB7P33312 244 aa4.83□□□□□ -1.64
PRP28YDR243C MKS1P34072 584 aa4.83□□□□□ -1.64
PRP28YDR243C MUD2P36084 527 aaKnown RBP4.83□□□□□ -1.64
PRP28YDR243C YKR018CP36114 725 aa4.83□□□□□ -1.64
PRP28YDR243C MUM2P38236 366 aa4.83□□□□□ -1.64
PRP28YDR243C AMN1P38285 549 aaPredicted RBP4.83□□□□□ -1.64
PRP28YDR243C YHR218WP38899 603 aa4.83□□□□□ -1.64
PRP28YDR243C PES4P39684 611 aa4.83□□□□□ -1.64
PRP28YDR243C SWD1P39706 426 aa4.83□□□□□ -1.64
PRP28YDR243C FAF1P40546 346 aaPredicted RBP4.83□□□□□ -1.64
PRP28YDR243C NUP85P46673 744 aa4.83□□□□□ -1.64
PRP28YDR243C SNX4P47057 423 aa4.83□□□□□ -1.64
PRP28YDR243C RIM21P48565 533 aa4.83□□□□□ -1.64
PRP28YDR243C RBL2P48606 106 aaKnown RBP4.83□□□□□ -1.64
PRP28YDR243C YGR035CP53222 116 aa4.83□□□□□ -1.64
PRP28YDR243C DCP2P53550 970 aaKnown RBP4.83□□□□□ -1.64
PRP28YDR243C NCS2P53923 493 aaPredicted RBP4.83□□□□□ -1.64
PRP28YDR243C SSL2Q00578 843 aa4.83□□□□□ -1.64
PRP28YDR243C MGR3Q04472 501 aa4.83□□□□□ -1.64
PRP28YDR243C YOR296WQ08748 1289 aa4.83□□□□□ -1.64
PRP28YDR243C YRM1Q12340 786 aa4.83□□□□□ -1.64
PRP28YDR243C HTZ1Q12692 134 aaKnown RBP4.83□□□□□ -1.64
PRP28YDR243C TAL1P15019 335 aaKnown RBP4.82□□□□□ -1.64
PRP28YDR243C TYR1P20049 452 aa4.82□□□□□ -1.64
PRP28YDR243C MRE11P32829 692 aa4.82□□□□□ -1.64
PRP28YDR243C SEC8P32855 1065 aa4.82□□□□□ -1.64
PRP28YDR243C BMH2P34730 273 aaKnown RBP4.82□□□□□ -1.64
PRP28YDR243C MRPL40P36534 297 aa4.82□□□□□ -1.64
PRP28YDR243C YSW1P38280 609 aa4.82□□□□□ -1.64
PRP28YDR243C MPT5P39016 859 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
PRP28YDR243C LAM5P43560 674 aa4.82□□□□□ -1.64
PRP28YDR243C JJJ2P46997 583 aa4.82□□□□□ -1.64
PRP28YDR243C ULP1Q02724 621 aa4.82□□□□□ -1.64
PRP28YDR243C SNZ1Q03148 297 aa4.82□□□□□ -1.64
PRP28YDR243C DML1Q03652 475 aa4.82□□□□□ -1.64
PRP28YDR243C TSR2Q06672 205 aaKnown RBP4.82□□□□□ -1.64
PRP28YDR243C ATG20Q07528 640 aa4.82□□□□□ -1.64
PRP28YDR243C YOL098CQ12496 1037 aa4.82□□□□□ -1.64
PRP28YDR243C YRF1-4O13559 1382 aa4.82□□□□□ -1.64
PRP28YDR243C ADE3P07245 946 aaKnown RBP4.81□□□□□ -1.64
PRP28YDR243C SES1P07284 462 aaKnown RBP4.81□□□□□ -1.64
PRP28YDR243C TRL1P09880 827 aaKnown RBP4.81□□□□□ -1.64
PRP28YDR243C PRE10P21242 288 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
PRP28YDR243C RPC19P28000 142 aaKnown RBP4.81□□□□□ -1.64
PRP28YDR243C SMY1P32364 656 aaKnown RBP4.81□□□□□ -1.64
PRP28YDR243C FBP26P32604 452 aa4.81□□□□□ -1.64
PRP28YDR243C ATO2P32907 282 aa4.81□□□□□ -1.64
PRP28YDR243C ATG19P35193 415 aa4.81□□□□□ -1.64
PRP28YDR243C DID4P36108 232 aa4.81□□□□□ -1.64
PRP28YDR243C UIP5P36137 443 aa4.81□□□□□ -1.64
PRP28YDR243C SIP3P38717 1229 aa4.81□□□□□ -1.64
PRP28YDR243C MEP1P40260 492 aa4.81□□□□□ -1.64
PRP28YDR243C YIL001WP40560 513 aa4.81□□□□□ -1.64
PRP28YDR243C PHB1P40961 287 aa4.81□□□□□ -1.64
PRP28YDR243C SGM1P47166 707 aa4.81□□□□□ -1.64
PRP28YDR243C YGR266WP53326 701 aa4.81□□□□□ -1.64
PRP28YDR243C DFG5Q05031 458 aa4.81□□□□□ -1.64
PRP28YDR243C MRX10Q05648 414 aa4.81□□□□□ -1.64
PRP28YDR243C STE23Q06010 1027 aa4.81□□□□□ -1.64
PRP28YDR243C BDF2Q07442 638 aa4.81□□□□□ -1.64
PRP28YDR243C YOR352WQ08816 343 aa4.81□□□□□ -1.64
PRP28YDR243C GPR1Q12361 961 aa4.81□□□□□ -1.64
PRP28YDR243C NOT5Q12514 560 aaPredicted RBP4.81□□□□□ -1.64
PRP28YDR243C ARO1P08566 1588 aaKnown RBP4.81□□□□□ -1.64
PRP28YDR243C HIR3P47171 1648 aa4.81□□□□□ -1.64
PRP28YDR243C YPR089WO13585 888 aa4.81□□□□□ -1.64
PRP28YDR243C REP1P03871 373 aa4.81□□□□□ -1.64
PRP28YDR243C RSR1P13856 272 aa4.81□□□□□ -1.64
PRP28YDR243C DAL7P21826 554 aa4.81□□□□□ -1.64
PRP28YDR243C ITR2P30606 609 aa4.81□□□□□ -1.64
PRP28YDR243C SEC21P32074 935 aaKnown RBP4.81□□□□□ -1.64
PRP28YDR243C PLC1P32383 869 aa4.81□□□□□ -1.64
PRP28YDR243C SLA1P32790 1244 aa4.81□□□□□ -1.64
PRP28YDR243C SPC42P36094 363 aa4.81□□□□□ -1.64
PRP28YDR243C TTI1P36097 1038 aa4.81□□□□□ -1.64
PRP28YDR243C ESL2P36168 1195 aa4.81□□□□□ -1.64
PRP28YDR243C ERP2P39704 215 aa4.81□□□□□ -1.64
PRP28YDR243C NOC2P39744 710 aaKnown RBP4.81□□□□□ -1.64
PRP28YDR243C YER034WP40022 185 aaKnown RBP4.81□□□□□ -1.64
PRP28YDR243C SLX8P40072 274 aa4.81□□□□□ -1.64
PRP28YDR243C GCD10P41814 478 aa4.81□□□□□ -1.64
PRP28YDR243C PXA1P41909 870 aa4.81□□□□□ -1.64
PRP28YDR243C IES1P43579 692 aa4.81□□□□□ -1.64
PRP28YDR243C MET12P46151 657 aa4.81□□□□□ -1.64
PRP28YDR243C RAD17P48581 401 aa4.81□□□□□ -1.64
PRP28YDR243C IMD4P50094 524 aaKnown RBP4.81□□□□□ -1.64
PRP28YDR243C DIP5P53388 608 aa4.81□□□□□ -1.64
PRP28YDR243C YKR005CQ02203 525 aa4.81□□□□□ -1.64
PRP28YDR243C SRP1Q02821 542 aaKnown RBP4.81□□□□□ -1.64
PRP28YDR243C SFH1Q06168 426 aa4.81□□□□□ -1.64
PRP28YDR243C SPP382Q06411 708 aaPredicted RBP4.81□□□□□ -1.64
PRP28YDR243C YLH47Q06493 454 aa4.81□□□□□ -1.64
PRP28YDR243C SDH5Q08230 162 aa4.81□□□□□ -1.64
PRP28YDR243C SNU66Q12420 587 aaPredicted RBP4.81□□□□□ -1.64
PRP28YDR243C VAS1P07806 1104 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms