RNA–Protein interactions for RNA: YDL170W

UGA3, Transcript of Transcriptional activator for GABA-dependent induction of GABA genes, yeast

Gene UGA3, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UGA3	YDL170W	HSP78	P33416	811 aa		5	□□□□□ -1.61
UGA3	YDL170W	ARL1	P38116	183 aa	Known RBP	5	□□□□□ -1.61
UGA3	YDL170W	YHR020W	P38708	688 aa	Known RBP	5	□□□□□ -1.61
UGA3	YDL170W	SPF1	P39986	1215 aa	Known RBP	5	□□□□□ -1.61
UGA3	YDL170W	MPP10	P47083	593 aa	Known RBP	5	□□□□□ -1.61
UGA3	YDL170W	FAA4	P47912	694 aa	Known RBP	5	□□□□□ -1.61
UGA3	YDL170W	ECL1	P48235	211 aa		5	□□□□□ -1.61
UGA3	YDL170W	TMA17	Q12513	150 aa		5	□□□□□ -1.61
UGA3	YDL170W	NFU1	P32860	256 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	EXO5	P38289	585 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	SHU2	P38957	223 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	RSP5	P39940	809 aa	Known RBP	4.99	□□□□□ -1.61
UGA3	YDL170W	VID27	P40157	782 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	NIT1	P40447	199 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	SLS1	P42900	643 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	YCS4	Q06156	1176 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	OPI10	Q08202	246 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	YEF3	P16521	1044 aa	Known RBP	4.99	□□□□□ -1.61
UGA3	YDL170W	RPL8A	P17076	256 aa	Known RBP	4.99	□□□□□ -1.61
UGA3	YDL170W	ADP1	P25371	1049 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	YGR237C	P50089	785 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	YGR125W	P53273	1036 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	TRE1	Q08919	783 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	YVC1	Q12324	675 aa		4.99	□□□□□ -1.61
UGA3	YDL170W	ERR1	P0CX10	437 aa		4.98	□□□□□ -1.61
UGA3	YDL170W	ERR2	P0CX11	437 aa		4.98	□□□□□ -1.61
UGA3	YDL170W	CDC34	P14682	295 aa		4.98	□□□□□ -1.61
UGA3	YDL170W	OPI1	P21957	404 aa		4.98	□□□□□ -1.61
UGA3	YDL170W	HIR1	P32479	840 aa		4.98	□□□□□ -1.61
UGA3	YDL170W	NNK1	P36003	928 aa		4.98	□□□□□ -1.61
UGA3	YDL170W	NEM1	P38757	446 aa		4.98	□□□□□ -1.61
UGA3	YDL170W	GGA2	P38817	585 aa	Known RBP	4.98	□□□□□ -1.61
UGA3	YDL170W	MDM1	Q01846	1127 aa		4.98	□□□□□ -1.61
UGA3	YDL170W	SSY1	Q03770	852 aa		4.98	□□□□□ -1.61
UGA3	YDL170W	SND1	Q04007	877 aa		4.98	□□□□□ -1.61
UGA3	YDL170W	OSH2	Q12451	1283 aa		4.98	□□□□□ -1.61
UGA3	YDL170W	PRO1	P32264	428 aa		4.97	□□□□□ -1.61
UGA3	YDL170W	MAL31	P38156	614 aa		4.97	□□□□□ -1.61
UGA3	YDL170W	UBP5	P39944	805 aa		4.97	□□□□□ -1.61
UGA3	YDL170W	HLJ1	P48353	224 aa		4.97	□□□□□ -1.61
UGA3	YDL170W	SPO75	Q07798	868 aa		4.97	□□□□□ -1.61
UGA3	YDL170W	NTG2	Q08214	380 aa		4.97	□□□□□ -1.61
UGA3	YDL170W	SPT6	P23615	1451 aa	Known RBP	4.97	□□□□□ -1.61
UGA3	YDL170W	CIT1	P00890	479 aa		4.96	□□□□□ -1.62
UGA3	YDL170W	HXK1	P04806	485 aa	Known RBP	4.96	□□□□□ -1.62
UGA3	YDL170W	GAS1	P22146	559 aa	Known RBP	4.96	□□□□□ -1.62
UGA3	YDL170W	TFC3	P34111	1160 aa		4.96	□□□□□ -1.62
UGA3	YDL170W	IES5	P40060	125 aa		4.96	□□□□□ -1.62
UGA3	YDL170W	MRPS18	P42847	217 aa		4.96	□□□□□ -1.62
UGA3	YDL170W	MTR4	P47047	1073 aa	Known RBP	4.96	□□□□□ -1.62
UGA3	YDL170W	YJR120W	P47157	116 aa		4.96	□□□□□ -1.62
UGA3	YDL170W	YGR053C	P53234	283 aa		4.96	□□□□□ -1.62
UGA3	YDL170W	MEH1	Q02205	184 aa		4.96	□□□□□ -1.62
UGA3	YDL170W	FAL1	Q12099	399 aa	Known RBP	4.96	□□□□□ -1.62
UGA3	YDL170W	MCD1	Q12158	566 aa		4.96	□□□□□ -1.62
UGA3	YDL170W	INH1	P01097	85 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	MSH2	P25847	964 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	JNM1	P36224	373 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	YAP1801	P38856	637 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	FAA3	P39002	694 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	PMT3	P47190	753 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	NUP145	P49687	1317 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	PRP43	P53131	767 aa	Known RBP	4.95	□□□□□ -1.62
UGA3	YDL170W	TPP1	Q03796	238 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	ATG13	Q06628	738 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	SNU66	Q12420	587 aa	Predicted RBP	4.95	□□□□□ -1.62
UGA3	YDL170W	PRP40	P33203	583 aa	Known RBP	4.95	□□□□□ -1.62
UGA3	YDL170W	YKL222C	P35995	705 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	YKL069W	P36088	180 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	PEX7	P39108	375 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	YAR028W	P39548	234 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	HOS4	P40480	1083 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	PEX13	P80667	386 aa		4.95	□□□□□ -1.62
UGA3	YDL170W	NOG1	Q02892	647 aa	Known RBP	4.95	□□□□□ -1.62
UGA3	YDL170W	PUS7	Q08647	676 aa	Known RBP	4.95	□□□□□ -1.62
UGA3	YDL170W	CAN1	P04817	590 aa		4.94	□□□□□ -1.62
UGA3	YDL170W	PIF1	P07271	859 aa		4.94	□□□□□ -1.62
UGA3	YDL170W	MPH2	P0CD99	609 aa		4.94	□□□□□ -1.62
UGA3	YDL170W	HSP60	P19882	572 aa	Known RBP	4.94	□□□□□ -1.62
UGA3	YDL170W	PRE9	P23638	258 aa	Known RBP	4.94	□□□□□ -1.62
UGA3	YDL170W	MSH3	P25336	1018 aa		4.94	□□□□□ -1.62
UGA3	YDL170W	UGA4	P32837	571 aa		4.94	□□□□□ -1.62
UGA3	YDL170W	PTC7	P38797	343 aa		4.94	□□□□□ -1.62
UGA3	YDL170W	RSM26	P47141	266 aa		4.94	□□□□□ -1.62
UGA3	YDL170W	CWC22	P53333	577 aa	Known RBP	4.94	□□□□□ -1.62
UGA3	YDL170W	UBX4	P54730	416 aa		4.94	□□□□□ -1.62
UGA3	YDL170W	TOS4	Q06266	489 aa		4.94	□□□□□ -1.62
UGA3	YDL170W	RRI2	Q12348	645 aa		4.94	□□□□□ -1.62
UGA3	YDL170W	HSL1	P34244	1518 aa		4.93	□□□□□ -1.62
UGA3	YDL170W	PGI1	P12709	554 aa	Known RBP	4.93	□□□□□ -1.62
UGA3	YDL170W	SSH4	P32343	579 aa		4.93	□□□□□ -1.62
UGA3	YDL170W	MRS6	P32864	603 aa	Known RBP	4.93	□□□□□ -1.62
UGA3	YDL170W	NMD3	P38861	518 aa	Known RBP	4.93	□□□□□ -1.62
UGA3	YDL170W	PEA2	P40091	420 aa		4.93	□□□□□ -1.62
UGA3	YDL170W	GTS1	P40956	396 aa		4.93	□□□□□ -1.62
UGA3	YDL170W	TFB2	Q02939	513 aa		4.93	□□□□□ -1.62
UGA3	YDL170W	UTP5	Q04177	643 aa	Known RBP	4.93	□□□□□ -1.62
UGA3	YDL170W	DAL4	Q04895	635 aa		4.93	□□□□□ -1.62
UGA3	YDL170W	DNF2	Q12675	1612 aa		4.93	□□□□□ -1.62
UGA3	YDL170W	FOB1	O13329	566 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms