RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C YLR125WQ12138 136 aa4.53□□□□□ -1.68
RRP42YDL111C SNF5P18480 905 aa4.52□□□□□ -1.69
RRP42YDL111C BAS1P22035 811 aa4.52□□□□□ -1.69
RRP42YDL111C SBA1P28707 216 aaKnown RBP4.52□□□□□ -1.69
RRP42YDL111C MRP8P35719 219 aa4.52□□□□□ -1.69
RRP42YDL111C ABZ1P37254 787 aaPredicted RBP4.52□□□□□ -1.69
RRP42YDL111C ALG3P38179 458 aa4.52□□□□□ -1.69
RRP42YDL111C CCZ1P38273 704 aa4.52□□□□□ -1.69
RRP42YDL111C YHR020WP38708 688 aaKnown RBP4.52□□□□□ -1.69
RRP42YDL111C GGA2P38817 585 aaKnown RBP4.52□□□□□ -1.69
RRP42YDL111C PIK1P39104 1066 aa4.52□□□□□ -1.69
RRP42YDL111C GPB2P39717 880 aa4.52□□□□□ -1.69
RRP42YDL111C RPN3P40016 523 aaKnown RBP4.52□□□□□ -1.69
RRP42YDL111C YDR132CQ03900 495 aa4.52□□□□□ -1.69
RRP42YDL111C FLC1Q08967 793 aa4.52□□□□□ -1.69
RRP42YDL111C OSH2Q12451 1283 aa4.52□□□□□ -1.69
RRP42YDL111C TRP2P00899 507 aaKnown RBP4.51□□□□□ -1.69
RRP42YDL111C PHO8P11491 566 aa4.51□□□□□ -1.69
RRP42YDL111C CTS1P29029 562 aa4.51□□□□□ -1.69
RRP42YDL111C LYP1P32487 611 aa4.51□□□□□ -1.69
RRP42YDL111C MNN1P39106 762 aa4.51□□□□□ -1.69
RRP42YDL111C HXT13P39924 564 aa4.51□□□□□ -1.69
RRP42YDL111C IRR1P40541 1150 aa4.51□□□□□ -1.69
RRP42YDL111C SEC26P41810 973 aaKnown RBP4.51□□□□□ -1.69
RRP42YDL111C HXT17P53631 564 aa4.51□□□□□ -1.69
RRP42YDL111C HXT15P54854 567 aa4.51□□□□□ -1.69
RRP42YDL111C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
RRP42YDL111C YPL260WQ08977 551 aa4.51□□□□□ -1.69
RRP42YDL111C YGR161W-CQ3E744 92 aa4.51□□□□□ -1.69
RRP42YDL111C GAL11P19659 1081 aa4.5□□□□□ -1.69
RRP42YDL111C RER2P35196 286 aa4.5□□□□□ -1.69
RRP42YDL111C SHM2P37291 469 aaKnown RBP4.5□□□□□ -1.69
RRP42YDL111C YBR184WP38299 523 aa4.5□□□□□ -1.69
RRP42YDL111C LAM1P38851 1228 aa4.5□□□□□ -1.69
RRP42YDL111C SNF7P39929 240 aaKnown RBP4.5□□□□□ -1.69
RRP42YDL111C HNT2P49775 206 aa4.5□□□□□ -1.69
RRP42YDL111C SGD1Q06132 899 aa4.5□□□□□ -1.69
RRP42YDL111C DED1P06634 604 aaKnown RBP4.49□□□□□ -1.69
RRP42YDL111C HSP60P19882 572 aaKnown RBP4.49□□□□□ -1.69
RRP42YDL111C RPL8BP29453 256 aaKnown RBP4.49□□□□□ -1.69
RRP42YDL111C SCT1P32784 759 aa4.49□□□□□ -1.69
RRP42YDL111C TIM23P32897 222 aa4.49□□□□□ -1.69
RRP42YDL111C PBY1P38254 753 aa4.49□□□□□ -1.69
RRP42YDL111C MEF2P39677 819 aa4.49□□□□□ -1.69
RRP42YDL111C RSP5P39940 809 aaKnown RBP4.49□□□□□ -1.69
RRP42YDL111C ERP6P53198 216 aa4.49□□□□□ -1.69
RRP42YDL111C YGR125WP53273 1036 aa4.49□□□□□ -1.69
RRP42YDL111C RAT1Q02792 1006 aaKnown RBP4.49□□□□□ -1.69
RRP42YDL111C ROD1Q02805 837 aa4.49□□□□□ -1.69
RRP42YDL111C RSB1Q08417 382 aa4.49□□□□□ -1.69
RRP42YDL111C YOR352WQ08816 343 aa4.49□□□□□ -1.69
RRP42YDL111C SPO21Q12411 609 aa4.49□□□□□ -1.69
RRP42YDL111C TSR4P25040 408 aa4.48□□□□□ -1.69
RRP42YDL111C MKK2P32491 506 aa4.48□□□□□ -1.69
RRP42YDL111C STE5P32917 917 aa4.48□□□□□ -1.69
RRP42YDL111C VBA5P36172 582 aa4.48□□□□□ -1.69
RRP42YDL111C GCN5Q03330 439 aa4.48□□□□□ -1.69
RRP42YDL111C FMP25Q08023 583 aa4.48□□□□□ -1.69
RRP42YDL111C CIT1P00890 479 aa4.47□□□□□ -1.69
RRP42YDL111C TUB2P02557 457 aaKnown RBP4.47□□□□□ -1.69
RRP42YDL111C SSB1P11484 613 aaKnown RBP4.47□□□□□ -1.69
RRP42YDL111C PUF4P25339 888 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
RRP42YDL111C THI4P32318 326 aa4.47□□□□□ -1.69
RRP42YDL111C PIN4P34217 668 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
RRP42YDL111C TOM20P35180 183 aa4.47□□□□□ -1.69
RRP42YDL111C SSB2P40150 613 aaKnown RBP4.47□□□□□ -1.69
RRP42YDL111C SPT20P50875 604 aa4.47□□□□□ -1.69
RRP42YDL111C UTP8P53276 713 aaKnown RBP4.47□□□□□ -1.69
RRP42YDL111C CYC1P00044 109 aaPredicted RBP4.46□□□□□ -1.7
RRP42YDL111C TOP1P04786 769 aa4.46□□□□□ -1.7
RRP42YDL111C CAN1P04817 590 aa4.46□□□□□ -1.7
RRP42YDL111C PRP9P19736 530 aaKnown RBP4.46□□□□□ -1.7
RRP42YDL111C ABD1P32783 436 aaPredicted RBP4.46□□□□□ -1.7
RRP42YDL111C RGD1P38339 666 aa4.46□□□□□ -1.7
RRP42YDL111C MPT5P39016 859 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
RRP42YDL111C HUL4P40985 892 aa4.46□□□□□ -1.7
RRP42YDL111C PFD1P46988 109 aa4.46□□□□□ -1.7
RRP42YDL111C YJR142WP47173 342 aa4.46□□□□□ -1.7
RRP42YDL111C PLB2Q03674 706 aa4.46□□□□□ -1.7
RRP42YDL111C EAF1Q06337 982 aa4.46□□□□□ -1.7
RRP42YDL111C UBX5Q06682 500 aa4.46□□□□□ -1.7
RRP42YDL111C RKM4Q12504 494 aa4.46□□□□□ -1.7
RRP42YDL111C INO1P11986 533 aa4.45□□□□□ -1.7
RRP42YDL111C SYP1P25623 870 aaKnown RBP4.45□□□□□ -1.7
RRP42YDL111C GRX4P32642 244 aa4.45□□□□□ -1.7
RRP42YDL111C TIF35Q04067 274 aaKnown RBP4.45□□□□□ -1.7
RRP42YDL111C YLR225CQ05948 407 aaKnown RBP4.45□□□□□ -1.7
RRP42YDL111C DUS4Q06063 367 aa4.45□□□□□ -1.7
RRP42YDL111C PNS1Q12412 539 aa4.45□□□□□ -1.7
RRP42YDL111C YER152CP10356 443 aa4.44□□□□□ -1.7
RRP42YDL111C ARE1P25628 610 aa4.44□□□□□ -1.7
RRP42YDL111C DOM34P33309 386 aa4.44□□□□□ -1.7
RRP42YDL111C YKL107WP34251 309 aa4.44□□□□□ -1.7
RRP42YDL111C YFL054CP43549 646 aa4.44□□□□□ -1.7
RRP42YDL111C CNN1P43618 361 aa4.44□□□□□ -1.7
RRP42YDL111C ROT1Q03691 256 aa4.44□□□□□ -1.7
RRP42YDL111C TAF8Q03750 510 aa4.44□□□□□ -1.7
RRP42YDL111C RSM24Q03976 319 aa4.44□□□□□ -1.7
RRP42YDL111C ESC2Q06340 456 aa4.44□□□□□ -1.7
RRP42YDL111C NOP14Q99207 810 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms