RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W CIC1P38779 376 aaKnown RBP6.91□□□□□ -1.3
SLX5YDL013W SLN1P39928 1220 aaPredicted RBP6.91□□□□□ -1.3
SLX5YDL013W RTT105P40063 208 aa6.91□□□□□ -1.3
SLX5YDL013W MPH1P40562 993 aa6.91□□□□□ -1.3
SLX5YDL013W LAM5P43560 674 aa6.91□□□□□ -1.3
SLX5YDL013W NNF1P47149 201 aa6.91□□□□□ -1.3
SLX5YDL013W RTC4P53850 401 aa6.91□□□□□ -1.3
SLX5YDL013W RNH1Q04740 348 aa6.91□□□□□ -1.3
SLX5YDL013W ISA1Q07821 250 aaPredicted RBP6.91□□□□□ -1.3
SLX5YDL013W HNM1P19807 563 aa6.9□□□□□ -1.3
SLX5YDL013W STE11P23561 717 aa6.9□□□□□ -1.3
SLX5YDL013W SIS1P25294 352 aaKnown RBP6.9□□□□□ -1.3
SLX5YDL013W DPH5P32469 300 aaPredicted RBP6.9□□□□□ -1.3
SLX5YDL013W ERC1P38767 581 aa6.9□□□□□ -1.3
SLX5YDL013W MXR1P40029 184 aa6.9□□□□□ -1.3
SLX5YDL013W FYV10P40492 516 aa6.9□□□□□ -1.3
SLX5YDL013W PXA1P41909 870 aa6.9□□□□□ -1.3
SLX5YDL013W IST1P53843 298 aaPredicted RBP6.9□□□□□ -1.3
SLX5YDL013W MTC5Q03897 1148 aa6.9□□□□□ -1.3
SLX5YDL013W YIL002W-AQ3E7Z5 69 aa6.9□□□□□ -1.3
SLX5YDL013W USO1P25386 1790 aa6.9□□□□□ -1.3
SLX5YDL013W RPC31P17890 251 aa6.9□□□□□ -1.31
SLX5YDL013W SCD5P34758 872 aa6.9□□□□□ -1.31
SLX5YDL013W FUI1P38196 639 aa6.9□□□□□ -1.31
SLX5YDL013W DLD3P39976 496 aaKnown RBP6.9□□□□□ -1.31
SLX5YDL013W FTR1P40088 404 aa6.9□□□□□ -1.31
SLX5YDL013W DAK2P43550 591 aa6.9□□□□□ -1.31
SLX5YDL013W IOC3P43596 787 aa6.9□□□□□ -1.31
SLX5YDL013W DBP9Q06218 594 aaKnown RBP6.9□□□□□ -1.31
SLX5YDL013W SPP382Q06411 708 aaPredicted RBP6.9□□□□□ -1.31
SLX5YDL013W VPS24P36095 224 aaKnown RBP6.89□□□□□ -1.31
SLX5YDL013W ABZ1P37254 787 aaPredicted RBP6.89□□□□□ -1.31
SLX5YDL013W RXT2P38255 430 aa6.89□□□□□ -1.31
SLX5YDL013W SSZ1P38788 538 aaKnown RBP6.89□□□□□ -1.31
SLX5YDL013W BFR1P38934 470 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
SLX5YDL013W MET18P40469 1032 aa6.89□□□□□ -1.31
SLX5YDL013W YDL073WQ07454 984 aa6.89□□□□□ -1.31
SLX5YDL013W SLK19Q08581 821 aaKnown RBP6.89□□□□□ -1.31
SLX5YDL013W THS1P04801 734 aaKnown RBP6.88□□□□□ -1.31
SLX5YDL013W TRX2P22803 104 aaKnown RBP6.88□□□□□ -1.31
SLX5YDL013W VPS60Q03390 229 aa6.88□□□□□ -1.31
SLX5YDL013W HED1Q03937 162 aa6.88□□□□□ -1.31
SLX5YDL013W YMR111CQ04461 462 aaPredicted RBP6.88□□□□□ -1.31
SLX5YDL013W GRC3Q07845 632 aa6.88□□□□□ -1.31
SLX5YDL013W YOR352WQ08816 343 aa6.88□□□□□ -1.31
SLX5YDL013W HAP1P0CE41 1502 aa6.88□□□□□ -1.31
SLX5YDL013W TPM1P17536 199 aaKnown RBP6.87□□□□□ -1.31
SLX5YDL013W MCM2P29469 868 aa6.87□□□□□ -1.31
SLX5YDL013W RIC1P40395 1056 aa6.87□□□□□ -1.31
SLX5YDL013W SET2P46995 733 aaKnown RBP6.87□□□□□ -1.31
SLX5YDL013W SPR28Q04921 423 aa6.87□□□□□ -1.31
SLX5YDL013W MAG2Q06436 670 aaKnown RBP6.87□□□□□ -1.31
SLX5YDL013W RTC1Q08281 1341 aa6.87□□□□□ -1.31
SLX5YDL013W VMA3P25515 160 aa6.87□□□□□ -1.31
SLX5YDL013W OLA1P38219 394 aaKnown RBP6.87□□□□□ -1.31
SLX5YDL013W YRB1P41920 201 aaKnown RBP6.87□□□□□ -1.31
SLX5YDL013W EFM5P53200 248 aaKnown RBP6.87□□□□□ -1.31
SLX5YDL013W RPN4Q03465 531 aa6.87□□□□□ -1.31
SLX5YDL013W RRN11Q04712 507 aa6.87□□□□□ -1.31
SLX5YDL013W ATG38Q05789 226 aaKnown RBP6.87□□□□□ -1.31
SLX5YDL013W TUF1P02992 437 aaKnown RBP6.86□□□□□ -1.31
SLX5YDL013W NOT3P06102 836 aaKnown RBP6.86□□□□□ -1.31
SLX5YDL013W HOM3P10869 527 aa6.86□□□□□ -1.31
SLX5YDL013W PMS1P14242 873 aa6.86□□□□□ -1.31
SLX5YDL013W GGA2P38817 585 aaKnown RBP6.86□□□□□ -1.31
SLX5YDL013W APE4P38821 490 aa6.86□□□□□ -1.31
SLX5YDL013W HXT8P40886 569 aa6.86□□□□□ -1.31
SLX5YDL013W INP52P50942 1183 aa6.86□□□□□ -1.31
SLX5YDL013W CDC55Q00362 526 aa6.86□□□□□ -1.31
SLX5YDL013W CWC21Q03375 135 aaKnown RBP6.86□□□□□ -1.31
SLX5YDL013W RIO1Q12196 484 aaKnown RBP6.86□□□□□ -1.31
SLX5YDL013W RRP36Q12481 300 aaPredicted RBP6.86□□□□□ -1.31
SLX5YDL013W YBL111CQ3E7Y5 667 aa6.86□□□□□ -1.31
SLX5YDL013W Q0182Q9ZZW1 134 aa6.86□□□□□ -1.31
SLX5YDL013W SWI1P09547 1314 aa6.86□□□□□ -1.31
SLX5YDL013W FOB1O13329 566 aa6.85□□□□□ -1.31
SLX5YDL013W LEU1P07264 779 aaKnown RBP6.85□□□□□ -1.31
SLX5YDL013W SEN2P16658 377 aa6.85□□□□□ -1.31
SLX5YDL013W KRR1P25586 316 aaPredicted RBP6.85□□□□□ -1.31
SLX5YDL013W GRX7P38068 203 aa6.85□□□□□ -1.31
SLX5YDL013W CIN4P39110 191 aa6.85□□□□□ -1.31
SLX5YDL013W SPC72P39723 622 aa6.85□□□□□ -1.31
SLX5YDL013W RAD33Q04231 177 aa6.85□□□□□ -1.31
SLX5YDL013W YLH47Q06493 454 aa6.85□□□□□ -1.31
SLX5YDL013W EDE1P34216 1381 aa6.85□□□□□ -1.31
SLX5YDL013W AAD3P25612 363 aa6.85□□□□□ -1.31
SLX5YDL013W DPB3P27344 201 aa6.85□□□□□ -1.31
SLX5YDL013W PPG1P32838 368 aa6.85□□□□□ -1.31
SLX5YDL013W SMC1P32908 1225 aa6.85□□□□□ -1.31
SLX5YDL013W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
SLX5YDL013W DAS1P47005 663 aa6.85□□□□□ -1.31
SLX5YDL013W FUS2Q05670 677 aa6.85□□□□□ -1.31
SLX5YDL013W NNT1Q05874 261 aa6.85□□□□□ -1.31
SLX5YDL013W DPH6Q12429 685 aa6.85□□□□□ -1.31
SLX5YDL013W YOL087CQ99247 1116 aa6.85□□□□□ -1.31
SLX5YDL013W ACE2P21192 770 aa6.84□□□□□ -1.31
SLX5YDL013W PAP1P29468 568 aaKnown RBP6.84□□□□□ -1.31
SLX5YDL013W VPS35P34110 944 aa6.84□□□□□ -1.31
SLX5YDL013W PEX18P38855 283 aa6.84□□□□□ -1.31
SLX5YDL013W STN1P38960 494 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms