RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeastyeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE1YBL031W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
SHE1YBL031W DOT1Q04089 582 aaKnown RBP5.66□□□□□ -1.5
SHE1YBL031W YPL260WQ08977 551 aa5.66□□□□□ -1.5
SHE1YBL031W PUF4P25339 888 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
SHE1YBL031W RPL8BP29453 256 aaKnown RBP5.65□□□□□ -1.5
SHE1YBL031W NNK1P36003 928 aa5.65□□□□□ -1.5
SHE1YBL031W GPT2P36148 743 aa5.65□□□□□ -1.5
SHE1YBL031W CIT3P43635 486 aa5.65□□□□□ -1.5
SHE1YBL031W PFD1P46988 109 aa5.65□□□□□ -1.5
SHE1YBL031W YGR125WP53273 1036 aa5.65□□□□□ -1.5
SHE1YBL031W RSA3Q05942 220 aaKnown RBP5.65□□□□□ -1.5
SHE1YBL031W HRK1Q08732 759 aaKnown RBP5.65□□□□□ -1.5
SHE1YBL031W ALG6Q12001 544 aaKnown RBP5.65□□□□□ -1.5
SHE1YBL031W YLR125WQ12138 136 aa5.65□□□□□ -1.5
SHE1YBL031W ATG2P53855 1592 aa5.64□□□□□ -1.51
SHE1YBL031W YCR015CP25616 317 aa5.64□□□□□ -1.51
SHE1YBL031W NUP82P40368 713 aa5.64□□□□□ -1.51
SHE1YBL031W YGL176CP46945 554 aa5.64□□□□□ -1.51
SHE1YBL031W UTP8P53276 713 aaKnown RBP5.64□□□□□ -1.51
SHE1YBL031W TPO2P53283 614 aa5.64□□□□□ -1.51
SHE1YBL031W YPL066WQ12194 479 aa5.64□□□□□ -1.51
SHE1YBL031W SCC2Q04002 1493 aa5.64□□□□□ -1.51
SHE1YBL031W CIT1P00890 479 aa5.63□□□□□ -1.51
SHE1YBL031W MLS1P30952 554 aa5.63□□□□□ -1.51
SHE1YBL031W SMY2P32909 740 aaKnown RBP5.63□□□□□ -1.51
SHE1YBL031W QNS1P38795 714 aaKnown RBP5.63□□□□□ -1.51
SHE1YBL031W RSP5P39940 809 aaKnown RBP5.63□□□□□ -1.51
SHE1YBL031W ELA1P53861 379 aaPredicted RBP5.63□□□□□ -1.51
SHE1YBL031W RCM1P53972 490 aa5.63□□□□□ -1.51
SHE1YBL031W EAF1Q06337 982 aa5.63□□□□□ -1.51
SHE1YBL031W PHO8P11491 566 aa5.62□□□□□ -1.51
SHE1YBL031W NFS1P25374 497 aa5.62□□□□□ -1.51
SHE1YBL031W ARE1P25628 610 aa5.62□□□□□ -1.51
SHE1YBL031W TIM23P32897 222 aa5.62□□□□□ -1.51
SHE1YBL031W HSP78P33416 811 aa5.62□□□□□ -1.51
SHE1YBL031W HUL4P40985 892 aa5.62□□□□□ -1.51
SHE1YBL031W SPP41P38904 1435 aa5.62□□□□□ -1.51
SHE1YBL031W MET6P05694 767 aaKnown RBP5.61□□□□□ -1.51
SHE1YBL031W UFD4P33202 1483 aa5.61□□□□□ -1.51
SHE1YBL031W RPN3P40016 523 aaKnown RBP5.61□□□□□ -1.51
SHE1YBL031W POB3Q04636 552 aaKnown RBP5.61□□□□□ -1.51
SHE1YBL031W RKR1Q04781 1562 aa5.61□□□□□ -1.51
SHE1YBL031W YLR257WQ06146 321 aaKnown RBP5.61□□□□□ -1.51
SHE1YBL031W SPP382Q06411 708 aaPredicted RBP5.61□□□□□ -1.51
SHE1YBL031W ESC8Q08119 714 aa5.61□□□□□ -1.51
SHE1YBL031W SPO21Q12411 609 aa5.61□□□□□ -1.51
SHE1YBL031W MDS3P53094 1487 aa5.6□□□□□ -1.51
SHE1YBL031W CAN1P04817 590 aa5.6□□□□□ -1.51
SHE1YBL031W RET1P22276 1149 aaKnown RBP5.6□□□□□ -1.51
SHE1YBL031W SIP5P40210 489 aaKnown RBP5.6□□□□□ -1.51
SHE1YBL031W MSH4P40965 878 aaPredicted RBP5.6□□□□□ -1.51
SHE1YBL031W ALR2P43553 858 aa5.6□□□□□ -1.51
SHE1YBL031W UTP14Q04500 899 aaKnown RBP5.6□□□□□ -1.51
SHE1YBL031W YDL124WQ07551 312 aaKnown RBP5.6□□□□□ -1.51
SHE1YBL031W PEP1P32319 1579 aa5.59□□□□□ -1.51
SHE1YBL031W TRM732Q03496 1420 aa5.59□□□□□ -1.51
SHE1YBL031W KIP1P28742 1111 aa5.59□□□□□ -1.51
SHE1YBL031W CDC11P32458 415 aa5.59□□□□□ -1.51
SHE1YBL031W MBP1P39678 833 aa5.59□□□□□ -1.51
SHE1YBL031W ALT1P52893 592 aa5.59□□□□□ -1.51
SHE1YBL031W TAF8Q03750 510 aa5.59□□□□□ -1.51
SHE1YBL031W YOR059CQ08448 450 aaKnown RBP5.59□□□□□ -1.51
SHE1YBL031W PNT1P38969 423 aa5.58□□□□□ -1.52
SHE1YBL031W GUS1P46655 708 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
SHE1YBL031W YER152CP10356 443 aa5.57□□□□□ -1.52
SHE1YBL031W CCC2P38995 1004 aa5.57□□□□□ -1.52
SHE1YBL031W TAF1P46677 1066 aa5.57□□□□□ -1.52
SHE1YBL031W YJL045WP47052 634 aa5.57□□□□□ -1.52
SHE1YBL031W UBX5Q06682 500 aa5.57□□□□□ -1.52
SHE1YBL031W RPL11AP0C0W9 174 aaKnown RBP5.56□□□□□ -1.52
SHE1YBL031W THI4P32318 326 aa5.56□□□□□ -1.52
SHE1YBL031W MNN1P39106 762 aa5.56□□□□□ -1.52
SHE1YBL031W GIP4P39732 760 aa5.56□□□□□ -1.52
SHE1YBL031W SIT1P39980 628 aa5.56□□□□□ -1.52
SHE1YBL031W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52 RIP-Chip
SHE1YBL031W TPP1Q03796 238 aa5.56□□□□□ -1.52
SHE1YBL031W CDA2Q06703 312 aa5.56□□□□□ -1.52
SHE1YBL031W PUS7Q08647 676 aaKnown RBP5.56□□□□□ -1.52
SHE1YBL031W RPL11BQ3E757 174 aaPredicted RBP5.56□□□□□ -1.52
SHE1YBL031W SNQ2P32568 1501 aaKnown RBP5.56□□□□□ -1.52
SHE1YBL031W YCF1P39109 1515 aaKnown RBP5.56□□□□□ -1.52
SHE1YBL031W COQ4O13525 335 aa5.55□□□□□ -1.52
SHE1YBL031W ERR1P0CX10 437 aa5.55□□□□□ -1.52
SHE1YBL031W ERR2P0CX11 437 aa5.55□□□□□ -1.52
SHE1YBL031W RPS4AP0CX35 261 aaKnown RBP5.55□□□□□ -1.52
SHE1YBL031W RPS4BP0CX36 261 aaKnown RBP5.55□□□□□ -1.52
SHE1YBL031W ADP1P25371 1049 aa5.55□□□□□ -1.52
SHE1YBL031W HBS1P32769 611 aaKnown RBP5.55□□□□□ -1.52
SHE1YBL031W GPB2P39717 880 aa5.55□□□□□ -1.52
SHE1YBL031W OYE3P41816 400 aaPredicted RBP5.55□□□□□ -1.52
SHE1YBL031W TNA1P53322 534 aa5.55□□□□□ -1.52
SHE1YBL031W YDR306CQ06640 478 aa5.55□□□□□ -1.52
SHE1YBL031W ACM1Q08981 209 aa5.55□□□□□ -1.52
SHE1YBL031W PAN1P32521 1480 aa5.54□□□□□ -1.52
SHE1YBL031W THS1P04801 734 aaKnown RBP5.54□□□□□ -1.52
SHE1YBL031W AAR2P32357 355 aaPredicted RBP5.54□□□□□ -1.52
SHE1YBL031W GEM1P39722 662 aa5.54□□□□□ -1.52
SHE1YBL031W RTA1P53047 317 aa5.54□□□□□ -1.52
SHE1YBL031W YGL081WP53156 320 aa5.54□□□□□ -1.52
SHE1YBL031W SRP1Q02821 542 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms