RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 SET5P38890 526 aaKnown RBP9.49□□□□□ -0.89
LSR1LSR1 SAP1P39955 897 aaKnown RBP9.49□□□□□ -0.89
LSR1LSR1 ROG3P43602 733 aa9.49□□□□□ -0.89
LSR1LSR1 TOS3P43637 560 aa9.49□□□□□ -0.89
LSR1LSR1 AIM33Q04516 312 aa9.49□□□□□ -0.89
LSR1LSR1 CSM3Q04659 317 aa9.49□□□□□ -0.89
LSR1LSR1 SUE1Q06524 206 aa9.49□□□□□ -0.89
LSR1LSR1 ACK1Q07622 623 aaPredicted RBP9.49□□□□□ -0.89
LSR1LSR1 TCO89Q08921 799 aa9.49□□□□□ -0.89
LSR1LSR1 DAS2Q12084 232 aa9.49□□□□□ -0.89
LSR1LSR1 GRX6Q12438 231 aa9.49□□□□□ -0.89
LSR1LSR1 SSB1P11484 613 aaKnown RBP9.48□□□□□ -0.89
LSR1LSR1 RAD53P22216 821 aa9.48□□□□□ -0.89
LSR1LSR1 YKU70P32807 602 aa9.48□□□□□ -0.89
LSR1LSR1 NFU1P32860 256 aa9.48□□□□□ -0.89
LSR1LSR1 SSB2P40150 613 aaKnown RBP9.48□□□□□ -0.89
LSR1LSR1 YJL171CP46992 396 aa9.48□□□□□ -0.89
LSR1LSR1 VIP1Q06685 1146 aaKnown RBP9.48□□□□□ -0.89
LSR1LSR1 YOR223WQ12015 292 aa9.48□□□□□ -0.89
LSR1LSR1 SAM2P19358 384 aaKnown RBP9.47□□□□□ -0.89
LSR1LSR1 TDA3P38758 523 aa9.47□□□□□ -0.89
LSR1LSR1 SMC2P38989 1170 aaKnown RBP9.47□□□□□ -0.89
LSR1LSR1 EMP47P43555 445 aa9.47□□□□□ -0.89
LSR1LSR1 BTN2P53286 410 aa9.47□□□□□ -0.89
LSR1LSR1 YGR273CP53329 174 aa9.47□□□□□ -0.89
LSR1LSR1 BUL2Q03758 920 aaKnown RBP9.47□□□□□ -0.89
LSR1LSR1 OMS1Q06668 471 aa9.47□□□□□ -0.89
LSR1LSR1 YDL057WQ07379 328 aa9.47□□□□□ -0.89
LSR1LSR1 MLH2Q07980 695 aa9.47□□□□□ -0.89
LSR1LSR1 SMC6Q12749 1114 aa9.47□□□□□ -0.89
LSR1LSR1 GSY1P23337 708 aa9.46□□□□□ -0.9
LSR1LSR1 SRO9P25567 434 aaKnown RBP9.46□□□□□ -0.9
LSR1LSR1 CDC60P26637 1090 aaKnown RBP9.46□□□□□ -0.9
LSR1LSR1 APL1P27351 700 aa9.46□□□□□ -0.9
LSR1LSR1 GCG1P32656 232 aaKnown RBP9.46□□□□□ -0.9
LSR1LSR1 PPS1P38148 807 aa9.46□□□□□ -0.9
LSR1LSR1 GDT1P38301 280 aaPredicted RBP9.46□□□□□ -0.9
LSR1LSR1 ORC6P38826 435 aa9.46□□□□□ -0.9
LSR1LSR1 GTT3P39996 337 aa9.46□□□□□ -0.9
LSR1LSR1 YJR079WP47126 109 aa9.46□□□□□ -0.9
LSR1LSR1 GUP1P53154 560 aa9.46□□□□□ -0.9
LSR1LSR1 FUS2Q05670 677 aa9.46□□□□□ -0.9
LSR1LSR1 OPY2Q06810 360 aa9.46□□□□□ -0.9
LSR1LSR1 TOP1P04786 769 aa9.45□□□□□ -0.9
LSR1LSR1 GFA1P14742 717 aaKnown RBP9.45□□□□□ -0.9
LSR1LSR1 YBL086CP38177 466 aa9.45□□□□□ -0.9
LSR1LSR1 KIC1P38692 1080 aa9.45□□□□□ -0.9
LSR1LSR1 PAN5P38787 379 aa9.45□□□□□ -0.9
LSR1LSR1 VPS45P38932 577 aa9.45□□□□□ -0.9
LSR1LSR1 UBP9P39967 754 aa9.45□□□□□ -0.9
LSR1LSR1 NUP82P40368 713 aa9.45□□□□□ -0.9
LSR1LSR1 MMM1P41800 426 aa9.45□□□□□ -0.9
LSR1LSR1 NBP1P52919 319 aaPredicted RBP9.45□□□□□ -0.9
LSR1LSR1 MFM1Q02783 413 aa9.45□□□□□ -0.9
LSR1LSR1 VTI1Q04338 217 aa9.45□□□□□ -0.9
LSR1LSR1 RAD1P06777 1100 aa9.44□□□□□ -0.9
LSR1LSR1 ERG11P10614 530 aa9.44□□□□□ -0.9
LSR1LSR1 KIN1P13185 1064 aa9.44□□□□□ -0.9
LSR1LSR1 RPL8AP17076 256 aaKnown RBP9.44□□□□□ -0.9
LSR1LSR1 TRK2P28584 889 aa9.44□□□□□ -0.9
LSR1LSR1 RAM2P29703 316 aa9.44□□□□□ -0.9
LSR1LSR1 XRS2P33301 854 aa9.44□□□□□ -0.9
LSR1LSR1 MED8P38304 223 aa9.44□□□□□ -0.9
LSR1LSR1 PIH1P38768 344 aa9.44□□□□□ -0.9
LSR1LSR1 YMR124WP39523 943 aaKnown RBP9.44□□□□□ -0.9
LSR1LSR1 ECM1P39715 212 aa9.44□□□□□ -0.9
LSR1LSR1 DSN1P40568 576 aa9.44□□□□□ -0.9
LSR1LSR1 MAD1P40957 749 aa9.44□□□□□ -0.9
LSR1LSR1 BRE2P43132 505 aa9.44□□□□□ -0.9
LSR1LSR1 MSN5P52918 1224 aa9.44□□□□□ -0.9
LSR1LSR1 CWC22P53333 577 aaKnown RBP9.44□□□□□ -0.9
LSR1LSR1 YMR114CQ04471 368 aaKnown RBP9.44□□□□□ -0.9
LSR1LSR1 DPL1Q05567 589 aa9.44□□□□□ -0.9
LSR1LSR1 YDL124WQ07551 312 aaKnown RBP9.44□□□□□ -0.9
LSR1LSR1 RRG1Q12167 365 aaPredicted RBP9.44□□□□□ -0.9
LSR1LSR1 CDC8P00572 216 aa9.43□□□□□ -0.9
LSR1LSR1 SEC20P28791 383 aa9.43□□□□□ -0.9
LSR1LSR1 SUL1P38359 859 aa9.43□□□□□ -0.9
LSR1LSR1 SIP3P38717 1229 aa9.43□□□□□ -0.9
LSR1LSR1 NDT80P38830 627 aa9.43□□□□□ -0.9
LSR1LSR1 DIG1Q03063 452 aaKnown RBP9.43□□□□□ -0.9
LSR1LSR1 URH1Q04179 340 aa9.43□□□□□ -0.9
LSR1LSR1 YLH47Q06493 454 aa9.43□□□□□ -0.9
LSR1LSR1 FAL1Q12099 399 aaKnown RBP9.43□□□□□ -0.9
LSR1LSR1 DAL7P21826 554 aa9.42□□□□□ -0.9
LSR1LSR1 YKL222CP35995 705 aa9.42□□□□□ -0.9
LSR1LSR1 ISW1P38144 1129 aa9.42□□□□□ -0.9
LSR1LSR1 UTP7P40055 554 aaKnown RBP9.42□□□□□ -0.9
LSR1LSR1 PGA2P53903 129 aa9.42□□□□□ -0.9
LSR1LSR1 YPR078CQ06813 372 aa9.42□□□□□ -0.9
LSR1LSR1 RUD3Q12234 484 aaKnown RBP9.42□□□□□ -0.9
LSR1LSR1 ILV1P00927 576 aaKnown RBP9.41□□□□□ -0.9
LSR1LSR1 PFK1P16861 987 aaKnown RBP9.41□□□□□ -0.9
LSR1LSR1 AFG2P32794 780 aa9.41□□□□□ -0.9
LSR1LSR1 SMC1P32908 1225 aa9.41□□□□□ -0.9
LSR1LSR1 KTR2P33550 425 aa9.41□□□□□ -0.9
LSR1LSR1 LAS1P36146 502 aaPredicted RBP9.41□□□□□ -0.9
LSR1LSR1 JNM1P36224 373 aa9.41□□□□□ -0.9
LSR1LSR1 CST26P38226 397 aa9.41□□□□□ -0.9
LSR1LSR1 SDS3P40505 327 aa9.41□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms